Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_P19
(897 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 286 1e-77
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 286 1e-77
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 286 1e-77
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 284 5e-77
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 259 2e-69
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 259 2e-69
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 258 4e-69
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 258 4e-69
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 257 9e-69
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 257 9e-69
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 253 1e-67
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 253 1e-67
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 239 2e-63
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 238 4e-63
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 219 2e-57
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 194 7e-50
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 140 1e-33
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 139 2e-33
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 139 3e-33
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 137 1e-32
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 137 1e-32
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 134 8e-32
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 120 1e-27
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 120 1e-27
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 79 3e-15
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 79 3e-15
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.64
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 4.5
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 4.5
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 4.5
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 7.9
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 286 bits (702), Expect = 1e-77
Identities = 127/158 (80%), Positives = 140/158 (88%)
Frame = +1
Query: 133 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 312
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 313 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 492
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 493 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 606
RIR+LAD CTGLQGFL+FH LLMERLS
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLS 158
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = +2
Query: 608 VDYGKKSKPGVRHLPRASGSTAVVEPYNSILT 703
VDYGKK+K P STAVVEPYNSILT
Sbjct: 159 VDYGKKAKLEFSIYPAPQVSTAVVEPYNSILT 190
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 286 bits (702), Expect = 1e-77
Identities = 127/158 (80%), Positives = 140/158 (88%)
Frame = +1
Query: 133 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 312
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 313 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 492
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 493 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 606
RIR+LAD CTGLQGFL+FH LLMERLS
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLS 158
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = +2
Query: 608 VDYGKKSKPGVRHLPRASGSTAVVEPYNSILT 703
VDYGKK+K P STAVVEPYNSILT
Sbjct: 159 VDYGKKAKLEFSIYPAPQVSTAVVEPYNSILT 190
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 286 bits (702), Expect = 1e-77
Identities = 127/158 (80%), Positives = 140/158 (88%)
Frame = +1
Query: 133 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 312
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 313 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 492
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 493 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 606
RIR+LAD CTGLQGFL+FH LLMERLS
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLS 158
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = +2
Query: 608 VDYGKKSKPGVRHLPRASGSTAVVEPYNSILT 703
VDYGKK+K P STAVVEPYNSILT
Sbjct: 159 VDYGKKAKLEFSIYPAPQVSTAVVEPYNSILT 190
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 284 bits (697), Expect = 5e-77
Identities = 126/157 (80%), Positives = 139/157 (88%)
Frame = +1
Query: 136 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 315
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 316 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 495
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 496 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 606
IR+LAD CTGLQGFL+FH LLMERLS
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLS 157
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = +2
Query: 608 VDYGKKSKPGVRHLPRASGSTAVVEPYNSILT 703
VDYGKK+K P STAVVEPYNSILT
Sbjct: 158 VDYGKKAKLEFSIYPAPQVSTAVVEPYNSILT 189
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 259 bits (635), Expect = 2e-69
Identities = 116/158 (73%), Positives = 134/158 (84%)
Frame = +1
Query: 133 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 312
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 313 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 492
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 493 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 606
RIR+LAD C+GLQGF +FH LLMERLS
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLS 156
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/32 (68%), Positives = 22/32 (68%)
Frame = +2
Query: 608 VDYGKKSKPGVRHLPRASGSTAVVEPYNSILT 703
VDYGKKSK P STAVVEPYNSILT
Sbjct: 157 VDYGKKSKLEFSIYPAPQVSTAVVEPYNSILT 188
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 259 bits (635), Expect = 2e-69
Identities = 116/158 (73%), Positives = 134/158 (84%)
Frame = +1
Query: 133 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 312
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 313 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 492
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 493 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 606
RIR+LAD C+GLQGF +FH LLMERLS
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLS 156
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/32 (68%), Positives = 22/32 (68%)
Frame = +2
Query: 608 VDYGKKSKPGVRHLPRASGSTAVVEPYNSILT 703
VDYGKKSK P STAVVEPYNSILT
Sbjct: 157 VDYGKKSKLEFSIYPAPQVSTAVVEPYNSILT 188
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 258 bits (632), Expect = 4e-69
Identities = 115/158 (72%), Positives = 134/158 (84%)
Frame = +1
Query: 133 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 312
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 313 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 492
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 493 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 606
RIR+LAD C+GLQGF +FH LLMERLS
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLS 156
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/32 (68%), Positives = 22/32 (68%)
Frame = +2
Query: 608 VDYGKKSKPGVRHLPRASGSTAVVEPYNSILT 703
VDYGKKSK P STAVVEPYNSILT
Sbjct: 157 VDYGKKSKLEFSIYPAPQVSTAVVEPYNSILT 188
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 258 bits (632), Expect = 4e-69
Identities = 115/158 (72%), Positives = 134/158 (84%)
Frame = +1
Query: 133 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 312
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 313 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 492
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 493 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 606
RIR+LAD C+GLQGF +FH LLMERLS
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLS 156
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/32 (65%), Positives = 21/32 (65%)
Frame = +2
Query: 608 VDYGKKSKPGVRHLPRASGSTAVVEPYNSILT 703
VDYGKKSK P TAVVEPYNSILT
Sbjct: 157 VDYGKKSKLEFSIYPAPQVCTAVVEPYNSILT 188
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 257 bits (629), Expect = 9e-69
Identities = 113/158 (71%), Positives = 132/158 (83%)
Frame = +1
Query: 133 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 312
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 313 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 492
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 493 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 606
R+R+L ++C LQGFLIFH L+MERLS
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLS 158
Score = 37.5 bits (83), Expect = 0.013
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2
Query: 608 VDYGKKSKPGVRHLPRASGSTAVVEPYNSILT 703
+DYGKK+K P ST++VEPYNS+LT
Sbjct: 159 IDYGKKAKLEFSIYPAPQISTSMVEPYNSLLT 190
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 257 bits (629), Expect = 9e-69
Identities = 113/159 (71%), Positives = 132/159 (83%)
Frame = +1
Query: 130 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 309
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 310 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 489
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 490 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 606
DR+R+L + C GLQGFL+FH LLMERLS
Sbjct: 125 DRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLS 163
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = +2
Query: 608 VDYGKKSKPGVRHLPRASGSTAVVEPYNSILT 703
VDYGKKSK P ST++VEPYNSILT
Sbjct: 164 VDYGKKSKLEFCIYPAPQVSTSMVEPYNSILT 195
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 253 bits (620), Expect = 1e-67
Identities = 113/158 (71%), Positives = 132/158 (83%)
Frame = +1
Query: 133 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 312
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 313 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 492
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 493 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 606
RIR+LAD C+GLQGF +FH LLMERLS
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLS 156
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/32 (68%), Positives = 22/32 (68%)
Frame = +2
Query: 608 VDYGKKSKPGVRHLPRASGSTAVVEPYNSILT 703
VDYGKKSK P STAVVEPYNSILT
Sbjct: 157 VDYGKKSKLEFSIYPAPQVSTAVVEPYNSILT 188
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 253 bits (620), Expect = 1e-67
Identities = 113/158 (71%), Positives = 132/158 (83%)
Frame = +1
Query: 133 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 312
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 313 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 492
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 493 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 606
RIR+LAD C+GLQGF +FH LLMERLS
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLS 156
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/32 (68%), Positives = 22/32 (68%)
Frame = +2
Query: 608 VDYGKKSKPGVRHLPRASGSTAVVEPYNSILT 703
VDYGKKSK P STAVVEPYNSILT
Sbjct: 157 VDYGKKSKLEFSIYPAPQVSTAVVEPYNSILT 188
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 239 bits (585), Expect = 2e-63
Identities = 108/158 (68%), Positives = 124/158 (78%)
Frame = +1
Query: 133 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 312
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 313 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 492
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 493 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 606
RIR+LA+ C GLQGF +FH +LMERLS
Sbjct: 118 RIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLS 155
Score = 37.9 bits (84), Expect = 0.010
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2
Query: 611 DYGKKSKPGVRHLPRASGSTAVVEPYNSILT 703
+YGKKSK P ST+VVEPYNSILT
Sbjct: 157 EYGKKSKLEFSIYPAPQISTSVVEPYNSILT 187
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 238 bits (582), Expect = 4e-63
Identities = 107/157 (68%), Positives = 125/157 (79%)
Frame = +1
Query: 136 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 315
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 316 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 495
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 496 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 606
+++LA+ C GLQGF+IFH LLMERLS
Sbjct: 128 VKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLS 164
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +2
Query: 611 DYGKKSKPGVRHLPRASGSTAVVEPYNSIL 700
+YGKK K P ST++VEPYNSIL
Sbjct: 166 EYGKKPKLEFAIYPAPQVSTSMVEPYNSIL 195
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 219 bits (535), Expect = 2e-57
Identities = 97/157 (61%), Positives = 117/157 (74%)
Frame = +1
Query: 136 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 315
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 316 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 495
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 496 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 606
IRK + C GLQGFL+FH LLMERLS
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLS 161
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +2
Query: 608 VDYGKKSKPGVRHLPRASGSTAVVEPYNSILT 703
V++GKKSK P ST+VVEPYNSILT
Sbjct: 162 VEFGKKSKLEFSVYPAPQVSTSVVEPYNSILT 193
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 194 bits (473), Expect = 7e-50
Identities = 87/136 (63%), Positives = 105/136 (77%)
Frame = +1
Query: 199 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 378
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 379 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXX 558
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 559 XXXXXXXXXLLMERLS 606
LLMERLS
Sbjct: 121 GGTGSGFLSLLMERLS 136
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +2
Query: 611 DYGKKSKPGVRHLPRASGSTAVVEPYNSIL 700
+YGKK K P ST++VEPYNSIL
Sbjct: 138 EYGKKPKLEFAIYPAPQVSTSMVEPYNSIL 167
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 140 bits (339), Expect = 1e-33
Identities = 69/157 (43%), Positives = 93/157 (59%)
Frame = +1
Query: 133 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 312
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 313 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 492
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 493 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 603
+RK A+ C LQGF + H LL+ ++
Sbjct: 119 VVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKI 155
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 139 bits (337), Expect = 2e-33
Identities = 69/157 (43%), Positives = 94/157 (59%)
Frame = +1
Query: 133 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 312
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 313 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 492
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 493 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 603
IRK A+ C LQGF + H LL+ ++
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKI 155
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 139 bits (336), Expect = 3e-33
Identities = 69/157 (43%), Positives = 94/157 (59%)
Frame = +1
Query: 133 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 312
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 313 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 492
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 493 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 603
IRK A+ C LQGF + H LL+ ++
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKI 155
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 137 bits (331), Expect = 1e-32
Identities = 67/157 (42%), Positives = 93/157 (59%)
Frame = +1
Query: 133 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 312
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 313 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 492
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 493 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 603
+RK A+ LQGF + H LL+ ++
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKI 155
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 137 bits (331), Expect = 1e-32
Identities = 67/157 (42%), Positives = 93/157 (59%)
Frame = +1
Query: 133 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 312
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 313 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 492
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 493 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 603
+RK A+ LQGF + H LL+ ++
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKI 155
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 134 bits (324), Expect = 8e-32
Identities = 66/157 (42%), Positives = 89/157 (56%)
Frame = +1
Query: 133 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 312
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 313 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 492
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 493 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 603
+RK A+ C LQGF + H LL+ ++
Sbjct: 119 VVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKI 155
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 120 bits (289), Expect = 1e-27
Identities = 62/157 (39%), Positives = 88/157 (56%)
Frame = +1
Query: 133 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 312
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 313 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 492
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 493 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 603
IR+ A+ L+GF + H LL+ +L
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKL 155
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 611 DYGKKSKPGVRHLPRASGSTAVVEPYNSILTNPH 712
+Y K+ +P A S VVEPYN+IL+ PH
Sbjct: 158 EYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPH 191
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 120 bits (289), Expect = 1e-27
Identities = 62/157 (39%), Positives = 88/157 (56%)
Frame = +1
Query: 133 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 312
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 313 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 492
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 493 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 603
IR+ A+ L+GF + H LL+ +L
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKL 155
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 611 DYGKKSKPGVRHLPRASGSTAVVEPYNSILTNPH 712
+Y K+ +P A S VVEPYN+IL+ PH
Sbjct: 158 EYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPH 191
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 79.4 bits (187), Expect = 3e-15
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
Frame = +1
Query: 145 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 324
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 325 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 495
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 496 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 603
I + A+ L G L H LL+ERL
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERL 159
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 79.4 bits (187), Expect = 3e-15
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
Frame = +1
Query: 145 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 324
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 325 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 495
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 496 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 603
I + A+ L G L H LL+ERL
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERL 159
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.64
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 161 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 316
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 175 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 354
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 355 VDE 363
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 175 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 354
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 355 VDE 363
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 175 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 354
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 355 VDE 363
DE
Sbjct: 116 ADE 118
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 423 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 328
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,860,365
Number of Sequences: 27780
Number of extensions: 401325
Number of successful extensions: 967
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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