SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_P18
         (906 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060943-1|AAL28491.1|  609|Drosophila melanogaster GM08365p pro...    77   4e-14
AE014297-4093|AAF56680.3|  653|Drosophila melanogaster CG5923-PB...    77   4e-14
AE014297-4092|AAF56681.1|  653|Drosophila melanogaster CG5923-PA...    77   4e-14
AY064174-1|AAL47186.1| 1984|Drosophila melanogaster rho GTPase g...    34   0.23 
AE014296-900|AAF47940.2| 1984|Drosophila melanogaster CG32239-PA...    34   0.23 
AY060815-1|AAL28363.1|  873|Drosophila melanogaster GH28601p pro...    33   0.54 
AE014298-804|AAF46090.2|  873|Drosophila melanogaster CG15765-PA...    33   0.54 
AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1 pr...    31   2.2  
AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA...    31   2.2  
BT001711-1|AAN71466.1|  182|Drosophila melanogaster RE67695p pro...    30   3.8  
AE014296-1719|AAN11954.1|  182|Drosophila melanogaster CG16707-P...    30   3.8  
AE014296-1718|AAN11953.1|  182|Drosophila melanogaster CG16707-P...    30   3.8  
AE014134-2167|AAF53171.1| 1354|Drosophila melanogaster CG17211-P...    29   6.6  
BT023817-1|AAZ66324.1|  590|Drosophila melanogaster LD26250p pro...    29   8.8  
BT009928-1|AAQ22397.1| 1089|Drosophila melanogaster SD10882p pro...    29   8.8  
AY095055-1|AAM11383.1| 1349|Drosophila melanogaster LD43045p pro...    29   8.8  
AY060226-1|AAL25265.1|  319|Drosophila melanogaster GH01486p pro...    29   8.8  
AE014298-2861|AAX52508.1|  588|Drosophila melanogaster CG33525-P...    29   8.8  
AE014298-2860|AAX52507.1|  657|Drosophila melanogaster CG33525-P...    29   8.8  
AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-P...    29   8.8  
AE014296-1717|AAN11952.1|  183|Drosophila melanogaster CG16707-P...    29   8.8  
AE014296-1716|AAF50218.1|  183|Drosophila melanogaster CG16707-P...    29   8.8  

>AY060943-1|AAL28491.1|  609|Drosophila melanogaster GM08365p
           protein.
          Length = 609

 Score = 76.6 bits (180), Expect = 4e-14
 Identities = 70/220 (31%), Positives = 95/220 (43%), Gaps = 24/220 (10%)
 Frame = +3

Query: 24  EELVTEQFKFFGINVEQDVLLKCVNLCEENNI-DAETFIEQWMAFSLNYVNGASPNLENL 200
           EE + +QF   G+     VL +C  L    NI DA  F+EQWMAFSL+++ G  P +ENL
Sbjct: 2   EEELKQQFDEMGVEPADAVLGRCAELAITYNIHDATEFVEQWMAFSLSHLQGEDPAIENL 61

Query: 201 DLFVRKEFSKRRTNASAKETTRPAAG---------KSLTVYGAKATSPP-DSEVLSSYV- 347
             F RK    R+  A  K T + A            SL  YG     P  D  V  S V 
Sbjct: 62  GDFERKVLQLRKDKAGYKATGQKAKSYGSPSVQDTSSLATYGVMEDDPMLDDYVSESAVD 121

Query: 348 --AVTPKRVKIEKDATTNPNNIV---PATYSPTVGSAKYASRT-------NAGTVVHSYG 491
             A+   + K + D T N        PA+Y+P     K    T         G +V ++G
Sbjct: 122 SSALHTPKAKKQSDRTANLKGAALFSPASYTPQSAKRKAGLETPSNSVAGKPGDIVDTFG 181

Query: 492 DEKLLQELGKANSSNDVLSLKITQVPNDDDEVYTKAMLGF 611
             KLL   G +  S    ++ +TQ    +D   T A LG+
Sbjct: 182 HPKLL--AGSSWQSQMEHTVPVTQKLLHNDAPLTIANLGY 219


>AE014297-4093|AAF56680.3|  653|Drosophila melanogaster CG5923-PB,
           isoform B protein.
          Length = 653

 Score = 76.6 bits (180), Expect = 4e-14
 Identities = 70/220 (31%), Positives = 95/220 (43%), Gaps = 24/220 (10%)
 Frame = +3

Query: 24  EELVTEQFKFFGINVEQDVLLKCVNLCEENNI-DAETFIEQWMAFSLNYVNGASPNLENL 200
           EE + +QF   G+     VL +C  L    NI DA  F+EQWMAFSL+++ G  P +ENL
Sbjct: 46  EEELKQQFDEMGVEPADAVLGRCAELAITYNIHDATEFVEQWMAFSLSHLQGEDPAIENL 105

Query: 201 DLFVRKEFSKRRTNASAKETTRPAAG---------KSLTVYGAKATSPP-DSEVLSSYV- 347
             F RK    R+  A  K T + A            SL  YG     P  D  V  S V 
Sbjct: 106 GDFERKVLQLRKDKAGYKATGQKAKSYGSPSVQDTSSLATYGVMEDDPMLDDYVSESAVD 165

Query: 348 --AVTPKRVKIEKDATTNPNNIV---PATYSPTVGSAKYASRT-------NAGTVVHSYG 491
             A+   + K + D T N        PA+Y+P     K    T         G +V ++G
Sbjct: 166 SSALHTPKAKKQSDRTANLKGAALFSPASYTPQSAKRKAGLETPSNSVAGKPGDIVDTFG 225

Query: 492 DEKLLQELGKANSSNDVLSLKITQVPNDDDEVYTKAMLGF 611
             KLL   G +  S    ++ +TQ    +D   T A LG+
Sbjct: 226 HPKLL--AGSSWQSQMEHTVPVTQKLLHNDAPLTIANLGY 263


>AE014297-4092|AAF56681.1|  653|Drosophila melanogaster CG5923-PA,
           isoform A protein.
          Length = 653

 Score = 76.6 bits (180), Expect = 4e-14
 Identities = 70/220 (31%), Positives = 95/220 (43%), Gaps = 24/220 (10%)
 Frame = +3

Query: 24  EELVTEQFKFFGINVEQDVLLKCVNLCEENNI-DAETFIEQWMAFSLNYVNGASPNLENL 200
           EE + +QF   G+     VL +C  L    NI DA  F+EQWMAFSL+++ G  P +ENL
Sbjct: 46  EEELKQQFDEMGVEPADAVLGRCAELAITYNIHDATEFVEQWMAFSLSHLQGEDPAIENL 105

Query: 201 DLFVRKEFSKRRTNASAKETTRPAAG---------KSLTVYGAKATSPP-DSEVLSSYV- 347
             F RK    R+  A  K T + A            SL  YG     P  D  V  S V 
Sbjct: 106 GDFERKVLQLRKDKAGYKATGQKAKSYGSPSVQDTSSLATYGVMEDDPMLDDYVSESAVD 165

Query: 348 --AVTPKRVKIEKDATTNPNNIV---PATYSPTVGSAKYASRT-------NAGTVVHSYG 491
             A+   + K + D T N        PA+Y+P     K    T         G +V ++G
Sbjct: 166 SSALHTPKAKKQSDRTANLKGAALFSPASYTPQSAKRKAGLETPSNSVAGKPGDIVDTFG 225

Query: 492 DEKLLQELGKANSSNDVLSLKITQVPNDDDEVYTKAMLGF 611
             KLL   G +  S    ++ +TQ    +D   T A LG+
Sbjct: 226 HPKLL--AGSSWQSQMEHTVPVTQKLLHNDAPLTIANLGY 263


>AY064174-1|AAL47186.1| 1984|Drosophila melanogaster rho GTPase
           guanine nucleotideexchange factor GEF64C protein.
          Length = 1984

 Score = 34.3 bits (75), Expect = 0.23
 Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
 Frame = +3

Query: 240 NASAKETTR-PAAGKSLTVYGAKATSPPDSEVLSSYVAVTPKRV---KIEKDATTNPNNI 407
           N  A E    PAA  +    GA ATSPP + V ++  AV PK V   K+EK    N +  
Sbjct: 423 NKKADEPAEMPAAAGAAGAAGAAATSPPAAAVTAA-TAVKPKAVTLAKVEKIEKDNESAY 481

Query: 408 VPATYSPTVGSAK 446
              T +PT  + K
Sbjct: 482 TVLTVTPTSPAIK 494


>AE014296-900|AAF47940.2| 1984|Drosophila melanogaster CG32239-PA
           protein.
          Length = 1984

 Score = 34.3 bits (75), Expect = 0.23
 Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
 Frame = +3

Query: 240 NASAKETTR-PAAGKSLTVYGAKATSPPDSEVLSSYVAVTPKRV---KIEKDATTNPNNI 407
           N  A E    PAA  +    GA ATSPP + V ++  AV PK V   K+EK    N +  
Sbjct: 423 NKKADEPAEMPAAAGAAGAAGAAATSPPAAAVTAA-TAVKPKAVTLAKVEKIEKDNESAY 481

Query: 408 VPATYSPTVGSAK 446
              T +PT  + K
Sbjct: 482 TVLTVTPTSPAIK 494


>AY060815-1|AAL28363.1|  873|Drosophila melanogaster GH28601p
           protein.
          Length = 873

 Score = 33.1 bits (72), Expect = 0.54
 Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
 Frame = +3

Query: 165 YVNGASPNLENLD--LFVRKEFSKRRTNAS--AKETTRPAAGKSLTVYGAKATSPPDSEV 332
           +VN ++ N   +   L V+  +     +AS  A  TTR     S T   A AT+P     
Sbjct: 620 HVNESADNTRFIPPMLLVKSHYVPPAKHASEHATTTTRATTTSSTTTAAATATTP----- 674

Query: 333 LSSYVAVTPKRVKIEKDATTNPNNIVPATYSPTVGSAKYASRTNAGTVVHSYG 491
            ++  A T  +V+++    T+   +  AT + T  +A  A      TV  + G
Sbjct: 675 -AAAAAETSTKVEVQPSTVTSSKELTAATAAATTSAATVADTVATSTVTATTG 726


>AE014298-804|AAF46090.2|  873|Drosophila melanogaster CG15765-PA
           protein.
          Length = 873

 Score = 33.1 bits (72), Expect = 0.54
 Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
 Frame = +3

Query: 165 YVNGASPNLENLD--LFVRKEFSKRRTNAS--AKETTRPAAGKSLTVYGAKATSPPDSEV 332
           +VN ++ N   +   L V+  +     +AS  A  TTR     S T   A AT+P     
Sbjct: 620 HVNESADNTRFIPPMLLVKSHYVPPAKHASEHATTTTRATTTSSTTTAAATATTP----- 674

Query: 333 LSSYVAVTPKRVKIEKDATTNPNNIVPATYSPTVGSAKYASRTNAGTVVHSYG 491
            ++  A T  +V+++    T+   +  AT + T  +A  A      TV  + G
Sbjct: 675 -AAAAAETSTKVEVQPSTVTSSKELTAATAAATTSAATVADTVATSTVTATTG 726


>AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1
            protein.
          Length = 1795

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 30/113 (26%), Positives = 45/113 (39%)
 Frame = +3

Query: 246  SAKETTRPAAGKSLTVYGAKATSPPDSEVLSSYVAVTPKRVKIEKDATTNPNNIVPATYS 425
            S+ ETT     KS T      T+P  + V+ S    T    K      T PN   P+T  
Sbjct: 988  SSTETTSTQKPKSTTPTSTTRTTPKVTTVIVSTQNPTTTTSKTSTVTITTPNP-SPSTQR 1046

Query: 426  PTVGSAKYASRTNAGTVVHSYGDEKLLQELGKANSSNDVLSLKITQVPNDDDE 584
            PT  + +  S T + T   S G  ++       NS++      +T+ P  D +
Sbjct: 1047 PTTTTRQPTSITASTT---SIGTTRIPTTTNPQNSTSSTDLTTVTRPPCPDPD 1096


>AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA
            protein.
          Length = 1795

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 30/113 (26%), Positives = 45/113 (39%)
 Frame = +3

Query: 246  SAKETTRPAAGKSLTVYGAKATSPPDSEVLSSYVAVTPKRVKIEKDATTNPNNIVPATYS 425
            S+ ETT     KS T      T+P  + V+ S    T    K      T PN   P+T  
Sbjct: 988  SSTETTSTQKPKSTTPTSTTRTTPKVTTVIVSTQNPTTTTSKTSTVTITTPNP-SPSTQR 1046

Query: 426  PTVGSAKYASRTNAGTVVHSYGDEKLLQELGKANSSNDVLSLKITQVPNDDDE 584
            PT  + +  S T + T   S G  ++       NS++      +T+ P  D +
Sbjct: 1047 PTTTTRQPTSITASTT---SIGTTRIPTTTNPQNSTSSTDLTTVTRPPCPDPD 1096


>BT001711-1|AAN71466.1|  182|Drosophila melanogaster RE67695p
           protein.
          Length = 182

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
 Frame = +3

Query: 252 KETTRPAAGKSLTVYGAKATSPPDSEVLSSYVAVTPKRVKIEKDATTNP-NNIVPATYSP 428
           +E T PA   + T      T+PPD+    +  + +      EK  TT P       T + 
Sbjct: 23  EEVTTPAPADTTTQESKNTTTPPDTTTTVTPPSTSTTSTTTEKTTTTPPITTSTEKTTTS 82

Query: 429 TVGSAKYASRTNAGT 473
           T  ++  +S T A T
Sbjct: 83  TTPASTTSSTTPAST 97


>AE014296-1719|AAN11954.1|  182|Drosophila melanogaster CG16707-PB,
           isoform B protein.
          Length = 182

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
 Frame = +3

Query: 252 KETTRPAAGKSLTVYGAKATSPPDSEVLSSYVAVTPKRVKIEKDATTNP-NNIVPATYSP 428
           +E T PA   + T      T+PPD+    +  + +      EK  TT P       T + 
Sbjct: 23  EEVTTPAPADTTTQESKNTTTPPDTTTTVTPPSTSTTSTTTEKTTTTPPITTSTEKTTTS 82

Query: 429 TVGSAKYASRTNAGT 473
           T  ++  +S T A T
Sbjct: 83  TTPASTTSSTTPAST 97


>AE014296-1718|AAN11953.1|  182|Drosophila melanogaster CG16707-PA,
           isoform A protein.
          Length = 182

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
 Frame = +3

Query: 252 KETTRPAAGKSLTVYGAKATSPPDSEVLSSYVAVTPKRVKIEKDATTNP-NNIVPATYSP 428
           +E T PA   + T      T+PPD+    +  + +      EK  TT P       T + 
Sbjct: 23  EEVTTPAPADTTTQESKNTTTPPDTTTTVTPPSTSTTSTTTEKTTTTPPITTSTEKTTTS 82

Query: 429 TVGSAKYASRTNAGT 473
           T  ++  +S T A T
Sbjct: 83  TTPASTTSSTTPAST 97


>AE014134-2167|AAF53171.1| 1354|Drosophila melanogaster CG17211-PA
           protein.
          Length = 1354

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 9/96 (9%)
 Frame = +3

Query: 216 KEFSKRRTNASAKETT-RPAAGKSLTVYGA--KATSP-PDSEVLSSYVAVTPKRVKIE-- 377
           K  + R+T  ++K TT +P   K+ T      K T+P P +   S+    TPK    +  
Sbjct: 670 KPRTTRKTITTSKPTTPKPTTPKTTTSKPTTPKITTPKPTTPKPSTTKTTTPKSSSAKPA 729

Query: 378 ---KDATTNPNNIVPATYSPTVGSAKYASRTNAGTV 476
              K  T  P   +P+T +PT  +    S T   T+
Sbjct: 730 LPPKSTTQRPTTPIPSTPAPTTTTTSTTSTTTKPTL 765


>BT023817-1|AAZ66324.1|  590|Drosophila melanogaster LD26250p
           protein.
          Length = 590

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = +3

Query: 195 NLDLFVRKEFSKRRTNASAKETTRPAAGKSLTVYGAKATSPPDSEVLSSYVAVTPKRVKI 374
           NLD  V++  + +   + A+E T PA   +    GA   S P +   +S  + T  R   
Sbjct: 353 NLDQIVKEYEAGKSEESGAEEQTEPAVDAAAA--GAATASAPSAADSTSAASATADR--- 407

Query: 375 EKDATTNPNN 404
            K +T N NN
Sbjct: 408 -KQSTENSNN 416


>BT009928-1|AAQ22397.1| 1089|Drosophila melanogaster SD10882p protein.
          Length = 1089

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
 Frame = +3

Query: 246  SAKETTRPAAGKSLT--VYGAKATSPPDS---EVLSSYVAV-TPKRVKIEKDATTNPNNI 407
            S  E   P+AG ++T  + GA  + P  S    +L    +V   KRV I++ AT+N NN 
Sbjct: 936  SPTELDTPSAGAAMTTPLLGASGSVPAPSGRESILKQQGSVKADKRVSIQQMATSNNNNN 995

Query: 408  VPATYSPTV 434
                 +P V
Sbjct: 996  NSTKLTPNV 1004


>AY095055-1|AAM11383.1| 1349|Drosophila melanogaster LD43045p
           protein.
          Length = 1349

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 25/107 (23%), Positives = 42/107 (39%)
 Frame = +3

Query: 216 KEFSKRRTNASAKETTRPAAGKSLTVYGAKATSPPDSEVLSSYVAVTPKRVKIEKDATTN 395
           +E +K + N     T   +   +L+V  A ATS P S    +  + TP        +T +
Sbjct: 117 QEQTKTQPNPDPPATAAKSLFGTLSVSAAPATSAPASATPFASFSFTPNGSSGFGTSTAS 176

Query: 396 PNNIVPATYSPTVGSAKYASRTNAGTVVHSYGDEKLLQELGKANSSN 536
           P   +    +  VGS    +      +  +    K LQ+  + N SN
Sbjct: 177 PFGNLSFGTASAVGSGNNTTLFTTALIKDNTVQGKTLQQESQLNKSN 223


>AY060226-1|AAL25265.1|  319|Drosophila melanogaster GH01486p
           protein.
          Length = 319

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = +3

Query: 195 NLDLFVRKEFSKRRTNASAKETTRPAAGKSLTVYGAKATSPPDSEVLSSYVAVTPKRVKI 374
           NLD  V++  + +   + A+E T PA   +    GA   S P +   +S  + T  R   
Sbjct: 82  NLDQIVKEYEAGKSEESGAEEQTEPAVDAAAA--GAATASAPSAADSTSAASATADR--- 136

Query: 375 EKDATTNPNN 404
            K +T N NN
Sbjct: 137 -KQSTENSNN 145


>AE014298-2861|AAX52508.1|  588|Drosophila melanogaster CG33525-PE,
           isoform E protein.
          Length = 588

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = +3

Query: 195 NLDLFVRKEFSKRRTNASAKETTRPAAGKSLTVYGAKATSPPDSEVLSSYVAVTPKRVKI 374
           NLD  V++  + +   + A+E T PA   +    GA   S P +   +S  + T  R   
Sbjct: 351 NLDQIVKEYEAGKSEESGAEEQTEPAVDAAAA--GAATASAPSAADSTSAASATADR--- 405

Query: 375 EKDATTNPNN 404
            K +T N NN
Sbjct: 406 -KQSTENSNN 414


>AE014298-2860|AAX52507.1|  657|Drosophila melanogaster CG33525-PF,
           isoform F protein.
          Length = 657

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = +3

Query: 195 NLDLFVRKEFSKRRTNASAKETTRPAAGKSLTVYGAKATSPPDSEVLSSYVAVTPKRVKI 374
           NLD  V++  + +   + A+E T PA   +    GA   S P +   +S  + T  R   
Sbjct: 420 NLDQIVKEYEAGKSEESGAEEQTEPAVDAAAA--GAATASAPSAADSTSAASATADR--- 474

Query: 375 EKDATTNPNN 404
            K +T N NN
Sbjct: 475 -KQSTENSNN 483


>AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-PA
            protein.
          Length = 2695

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 25/107 (23%), Positives = 42/107 (39%)
 Frame = +3

Query: 216  KEFSKRRTNASAKETTRPAAGKSLTVYGAKATSPPDSEVLSSYVAVTPKRVKIEKDATTN 395
            +E +K + N     T   +   +L+V  A ATS P S    +  + TP        +T +
Sbjct: 1486 QEQTKTQPNPDPPATAAKSLFGTLSVSAAPATSAPASATPFASFSFTPNGSSGFGTSTAS 1545

Query: 396  PNNIVPATYSPTVGSAKYASRTNAGTVVHSYGDEKLLQELGKANSSN 536
            P   +    +  VGS    +      +  +    K LQ+  + N SN
Sbjct: 1546 PFGNLSFGTASAVGSGNNTTLFTTALIKDNTVQGKTLQQESQLNKSN 1592


>AE014296-1717|AAN11952.1|  183|Drosophila melanogaster CG16707-PD,
           isoform D protein.
          Length = 183

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
 Frame = +3

Query: 240 NASAKETTRPAAGKSLTVYGAKATSPPDSEVLSSYVAVTPKRVKIEKDATTNP-NNIVPA 416
           N   +  T PA   + T      T+PPD+    +  + +      EK  TT P       
Sbjct: 20  NLCEEAVTTPAPADTTTQESKNTTTPPDTTTTVTPPSTSTTSTTTEKTTTTPPITTSTEK 79

Query: 417 TYSPTVGSAKYASRTNAGT 473
           T + T  ++  +S T A T
Sbjct: 80  TTTSTTPASTTSSTTPAST 98


>AE014296-1716|AAF50218.1|  183|Drosophila melanogaster CG16707-PC,
           isoform C protein.
          Length = 183

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
 Frame = +3

Query: 240 NASAKETTRPAAGKSLTVYGAKATSPPDSEVLSSYVAVTPKRVKIEKDATTNP-NNIVPA 416
           N   +  T PA   + T      T+PPD+    +  + +      EK  TT P       
Sbjct: 20  NLCEEAVTTPAPADTTTQESKNTTTPPDTTTTVTPPSTSTTSTTTEKTTTTPPITTSTEK 79

Query: 417 TYSPTVGSAKYASRTNAGT 473
           T + T  ++  +S T A T
Sbjct: 80  TTTSTTPASTTSSTTPAST 98


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,909,186
Number of Sequences: 53049
Number of extensions: 802126
Number of successful extensions: 2333
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2330
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -