Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_P17
(891 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC024147-1|AAH24147.2| 505|Homo sapiens GPATC8 protein protein. 31 5.6
AF160252-1|AAF03681.1| 1089|Homo sapiens KIAA0553 protein protein. 31 5.6
AB011125-1|BAA25479.2| 1450|Homo sapiens KIAA0553 protein protein. 31 5.6
BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domai... 30 9.8
AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein pr... 30 9.8
AF020267-1|AAC26597.1| 223|Homo sapiens myosin-IXb splice varia... 30 9.8
AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein. 30 9.8
AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein. 30 9.8
>BC024147-1|AAH24147.2| 505|Homo sapiens GPATC8 protein protein.
Length = 505
Score = 31.1 bits (67), Expect = 5.6
Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Frame = +3
Query: 135 KA*SAMTSLLIKQRHIIPQXLSHAAPVLTHAAPLIQHAGPVVHAAPVEHSSYIHASPVVQ 314
KA A +L + P + A + +QHA HAA + IH P Q
Sbjct: 344 KAFPASAALAPATPALQPIHIQQPATASATSITTVQHAILQHHAAAAAAAIGIHPHPHPQ 403
Query: 315 HFSPVQHAPVVHHAAIPIAVEHSDH--VEDHAPAKYEFSYSV 434
+ V H P H PI++ H H + H PA + S+ +
Sbjct: 404 PLAQVHHIPQPH--LTPISLSHLTHSIIPGH-PATFLASHPI 442
>AF160252-1|AAF03681.1| 1089|Homo sapiens KIAA0553 protein protein.
Length = 1089
Score = 31.1 bits (67), Expect = 5.6
Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Frame = +3
Query: 135 KA*SAMTSLLIKQRHIIPQXLSHAAPVLTHAAPLIQHAGPVVHAAPVEHSSYIHASPVVQ 314
KA A +L + P + A + +QHA HAA + IH P Q
Sbjct: 928 KAFPASAALAPATPALQPIHIQQPATASATSITTVQHAILQHHAAAAAAAIGIHPHPHPQ 987
Query: 315 HFSPVQHAPVVHHAAIPIAVEHSDH--VEDHAPAKYEFSYSV 434
+ V H P H PI++ H H + H PA + S+ +
Sbjct: 988 PLAQVHHIPQPH--LTPISLSHLTHSIIPGH-PATFLASHPI 1026
>AB011125-1|BAA25479.2| 1450|Homo sapiens KIAA0553 protein protein.
Length = 1450
Score = 31.1 bits (67), Expect = 5.6
Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Frame = +3
Query: 135 KA*SAMTSLLIKQRHIIPQXLSHAAPVLTHAAPLIQHAGPVVHAAPVEHSSYIHASPVVQ 314
KA A +L + P + A + +QHA HAA + IH P Q
Sbjct: 1289 KAFPASAALAPATPALQPIHIQQPATASATSITTVQHAILQHHAAAAAAAIGIHPHPHPQ 1348
Query: 315 HFSPVQHAPVVHHAAIPIAVEHSDH--VEDHAPAKYEFSYSV 434
+ V H P H PI++ H H + H PA + S+ +
Sbjct: 1349 PLAQVHHIPQPH--LTPISLSHLTHSIIPGH-PATFLASHPI 1387
>BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domain
containing 14 protein.
Length = 949
Score = 30.3 bits (65), Expect = 9.8
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +3
Query: 264 AAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDP 443
A P+ SS + P H PVQ H A + + VE H + E+S S P
Sbjct: 367 APPLVTSSGVARVPPTSHVGPVQSGRGSHAAELRVEVEQPHHQLPREGSSSEYSSSSSSP 426
>AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein
protein.
Length = 845
Score = 30.3 bits (65), Expect = 9.8
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +3
Query: 264 AAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDP 443
A P+ SS + P H PVQ H A + + VE H + E+S S P
Sbjct: 250 APPLVTSSGVARVPPTSHVGPVQSGRGSHAAELRVEVEQPHHQLPREGSSSEYSSSSSSP 309
>AF020267-1|AAC26597.1| 223|Homo sapiens myosin-IXb splice variant
protein.
Length = 223
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +1
Query: 337 LQSCTTLRFQLPSNTPIMS--KTMLPRSMSSHIPSRIP 444
L S T+R + P TPIMS LP + SH+P P
Sbjct: 110 LSSFVTVRVKTPRRTPIMSTANIKLPPGLPSHLPRWAP 147
>AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein.
Length = 949
Score = 30.3 bits (65), Expect = 9.8
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +3
Query: 264 AAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDP 443
A P+ SS + P H PVQ H A + + VE H + E+S S P
Sbjct: 367 APPLVTSSGVARVPPTSHVGPVQSGRGSHAAELRVEVEQPHHQLPREGSSSEYSSSSSSP 426
>AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein.
Length = 910
Score = 30.3 bits (65), Expect = 9.8
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +3
Query: 264 AAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDP 443
A P+ SS + P H PVQ H A + + VE H + E+S S P
Sbjct: 328 APPLVTSSGVARVPPTSHVGPVQSGRGSHAAELRVEVEQPHHQLPREGSSSEYSSSSSSP 387
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,771,351
Number of Sequences: 237096
Number of extensions: 2803697
Number of successful extensions: 12178
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12141
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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