Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_P17
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 36 0.029
AF017746-1|AAD01632.1| 1198|Caenorhabditis elegans ladder protei... 35 0.090
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 34 0.12
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 34 0.16
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 32 0.48
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 32 0.48
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 31 1.1
AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical ... 31 1.1
U88308-9|AAB42325.1| 933|Caenorhabditis elegans Patched related... 29 4.5
U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical p... 29 5.9
U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical p... 29 5.9
Z99773-4|CAB16925.1| 342|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z99773-1|CAB16923.2| 406|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z83228-2|CAB05733.1| 370|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z50110-5|CAA90447.1| 342|Caenorhabditis elegans Hypothetical pr... 28 7.8
AF083878-1|AAD48898.1| 342|Caenorhabditis elegans cyclin-depend... 28 7.8
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 28 7.8
AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical ... 28 7.8
AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical ... 28 7.8
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ... 28 7.8
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 28 7.8
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 36.3 bits (80), Expect = 0.029
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Frame = +3
Query: 282 SSYIHASPVVQHFSPVQHAPVVHHAAI--PIAVEHSDHVE--DHAPA--KYEF--SYSVE 437
S+ H+S +H + +PV + ++ P A EH +H E H+PA + EF S SV
Sbjct: 703 SNQFHSS---EHIEEARQSPVTNQESVHSPHASEHFEHREVVPHSPAASQEEFGRSPSVH 759
Query: 438 DPHTGDHKSQH-ETRDGDVVKGEYSLLQPDGSIRKVEYTADHH 563
PH +H H E + V E + P +HH
Sbjct: 760 SPHVSEHFEHHEEAQHSPVASQEEAARSPSVHSSHASEHFEHH 802
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/72 (23%), Positives = 28/72 (38%)
Frame = +3
Query: 258 VHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVE 437
V + P S + +S +HF +H V + S+H+E+ + SV
Sbjct: 671 VASEPAARSPSVQSSRTSEHF---EHRGEVPQSPSSNQFHSSEHIEEARQSPVTNQESVH 727
Query: 438 DPHTGDHKSQHE 473
PH +H E
Sbjct: 728 SPHASEHFEHRE 739
>AF017746-1|AAD01632.1| 1198|Caenorhabditis elegans ladder protein
protein.
Length = 1198
Score = 34.7 bits (76), Expect = 0.090
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = -1
Query: 417 HTSREHGLRHDRSVRRQLESQRGARLEHVAQG*SVGLLAKHVYTKNVPRGRREQRDRHVE 238
H+S+ R D + L +++ L+ +AQG V+ +P G+REQRD+ +
Sbjct: 27 HSSKSFRNRRDNDLLDWLTAEQKVSLKDIAQGTEEFKKKVAVFYNELPSGKREQRDKFYK 86
Query: 237 SKGLRESALEQ 205
+ L+ +A Q
Sbjct: 87 THCLQWTAKAQ 97
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 183 IPQXLSHAAPVLTHAAPLIQHAGPVVHAAPVEHSSYIHASPVVQHFSP--VQHAPVVHHA 356
+ Q + P A P++Q A PV A+P + + PVVQ VQ APVV A
Sbjct: 202 VAQQAPPSQPQQAQAQPVVQQAPPVQQASPKPVAQPVQQQPVVQAPPKPIVQQAPVVQQA 261
Query: 357 AIP 365
P
Sbjct: 262 PPP 264
Score = 31.9 bits (69), Expect = 0.63
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = +3
Query: 183 IPQXLSHAAPVLTHAAPLIQHAGPVVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAI 362
+ Q + V P++Q A PVV AP A PV Q P APVV A+
Sbjct: 234 VAQPVQQQPVVQAPPKPIVQQA-PVVQQAPPPKQQQAQAQPVQQ---PPNPAPVVQQASA 289
Query: 363 PI 368
P+
Sbjct: 290 PV 291
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 231 PLIQHAGPVVHAAPVEHSSYIHASPVVQHFSPVQHA 338
P++Q PV AP A PVVQ PVQ A
Sbjct: 196 PVVQ--APVAQQAPPSQPQQAQAQPVVQQAPPVQQA 229
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 33.9 bits (74), Expect = 0.16
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 273 VEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPA 410
VE SSYIH+S +QH H P + ++H H P+
Sbjct: 87 VESSSYIHSSQQIQHPPQQHHPPPPSPPPVAETIQHQPHPSQQQPS 132
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 32.3 bits (70), Expect = 0.48
Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Frame = +1
Query: 238 FNMPVPLFTPPP--WNILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKTMLPR 411
+++P P PPP W R+ S TS N TT PS TP+ + P
Sbjct: 605 YHVPTPTDLPPPPVWPAPNFDRRRKSSETSFTTN-----TTTNTLTPS-TPVTPPVLRPA 658
Query: 412 SMSSHIPSRIPTPAITSPNTKPVM 483
S P P T N KP +
Sbjct: 659 FSESKAPQEPSKPVETKENNKPAL 682
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 32.3 bits (70), Expect = 0.48
Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Frame = +1
Query: 238 FNMPVPLFTPPP--WNILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKTMLPR 411
+++P P PPP W R+ S TS N TT PS TP+ + P
Sbjct: 507 YHVPTPTDLPPPPVWPAPNFDRRRKSSETSFTTN-----TTTNTLTPS-TPVTPPVLRPA 560
Query: 412 SMSSHIPSRIPTPAITSPNTKPVM 483
S P P T N KP +
Sbjct: 561 FSESKAPQEPSKPVETKENNKPAL 584
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 705 VLHSAPV-VHSTPXVHSAPLIHSAPGXHSE 791
V S PV +H TP V S PL HSAP S+
Sbjct: 154 VQQSPPVPIHPTPPVSSTPLRHSAPSFASD 183
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 705 VLHSAPV-VHSTPXVHSAPLIHSAPGXHSE 791
V S PV +H TP V S PL HSAP S+
Sbjct: 154 VQQSPPVPIHPTPPVSSTPLRHSAPSFASD 183
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/96 (27%), Positives = 30/96 (31%), Gaps = 6/96 (6%)
Frame = +3
Query: 201 HAAPVLTHAAPLIQHAGPVVHAAPVEHSSY-----IHASPVVQ-HFSPVQHAPVVHHAAI 362
H AP H H P H EH ++ H SP H HAP H
Sbjct: 462 HHAPA-HHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHG 520
Query: 363 PIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQH 470
H H E H + + H G H S H
Sbjct: 521 EHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHH 556
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/104 (22%), Positives = 35/104 (33%), Gaps = 1/104 (0%)
Frame = +3
Query: 279 HSSYIHASPVVQHFSPVQHAPVVHHAAIPIAV-EHSDHVEDHAPAKYEFSYSVEDPHTGD 455
HS H H +P H HH + + H H H + + H G
Sbjct: 556 HSPAHHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGH 615
Query: 456 HKSQHETRDGDVVKGEYSLLQPDGSIRKVEYTADHHNGFNAIVH 587
H + + G G + P E+ DHH+G + + H
Sbjct: 616 HGAGYGAHHGH--HGAHHHHAPHHEHH--EHHGDHHHGSHGVHH 655
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/76 (26%), Positives = 24/76 (31%)
Frame = +3
Query: 243 HAGPVVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEF 422
H P H H + HA H HAP H H H H+PA +
Sbjct: 449 HHSPAHHG---HHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHH-- 503
Query: 423 SYSVEDPHTGDHKSQH 470
+ E H H H
Sbjct: 504 GHHGEHHHAPAHHGHH 519
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/91 (26%), Positives = 31/91 (34%)
Frame = +3
Query: 198 SHAAPVLTHAAPLIQHAGPVVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVE 377
SH +P H H P H EH ++ H H +P H HH
Sbjct: 496 SHHSPA-HHGHHGEHHHAPAHHGHHGEHGTH-HGHHGEHHHAPAHHG---HHGEH--GTH 548
Query: 378 HSDHVEDHAPAKYEFSYSVEDPHTGDHKSQH 470
H H H+PA + + E H H H
Sbjct: 549 HGHHGSHHSPAHH--GHHGEHHHAPAHHGHH 577
>AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical
protein F54E2.2 protein.
Length = 174
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 355 AWCTTGACCTGLKCWTTGEACIYEEC 278
+WCTT C G KC TG C Y C
Sbjct: 150 SWCTTDQDCKGKKCCPTG--CDYNVC 173
>U88308-9|AAB42325.1| 933|Caenorhabditis elegans Patched related
family protein 2 protein.
Length = 933
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 470 VLGLVIAGVGILDGI*ELILRGSMVFDMIGV 378
+LG+V AG+ IL G+ L L G D++GV
Sbjct: 304 ILGVVSAGIAILTGVGFLSLMGMPYNDIVGV 334
>U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical
protein C17G10.6b protein.
Length = 487
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 92 GGVI--DEGHGHAVSSQSIVRHDEPSHQATAHYTPXIE 199
GG + DEG HAV +H P + T H P +E
Sbjct: 140 GGFVAGDEGTRHAVVDSEGTKHGAPDTEGTRHDAPDLE 177
>U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical
protein C17G10.6a protein.
Length = 683
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 92 GGVI--DEGHGHAVSSQSIVRHDEPSHQATAHYTPXIE 199
GG + DEG HAV +H P + T H P +E
Sbjct: 191 GGFVAGDEGTRHAVVDSEGTKHGAPDTEGTRHDAPDLE 228
>Z99773-4|CAB16925.1| 342|Caenorhabditis elegans Hypothetical
protein F18H3.5a protein.
Length = 342
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -1
Query: 297 HVYTKNVPRGRREQRDRHVESKGLR 223
H + +N+PRG EQ+ +HV ++ +R
Sbjct: 131 HTFLRNIPRGVPEQQAKHVTAQIVR 155
>Z99773-1|CAB16923.2| 406|Caenorhabditis elegans Hypothetical
protein F18H3.5b protein.
Length = 406
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -1
Query: 297 HVYTKNVPRGRREQRDRHVESKGLR 223
H + +N+PRG EQ+ +HV ++ +R
Sbjct: 195 HTFLRNIPRGVPEQQAKHVTAQIVR 219
>Z83228-2|CAB05733.1| 370|Caenorhabditis elegans Hypothetical
protein F52F12.2 protein.
Length = 370
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = +2
Query: 299 FASSPTLQPCATCSSRAPRCDSNCRRTLRSCRRPCSRE 412
F +SPTL P +T S P S TL R P SRE
Sbjct: 292 FIASPTLLPPSTTLSSTPPTISPSAPTLLPTRSPKSRE 329
>Z50110-5|CAA90447.1| 342|Caenorhabditis elegans Hypothetical
protein F18H3.5a protein.
Length = 342
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -1
Query: 297 HVYTKNVPRGRREQRDRHVESKGLR 223
H + +N+PRG EQ+ +HV ++ +R
Sbjct: 131 HTFLRNIPRGVPEQQAKHVTAQIVR 155
>AF083878-1|AAD48898.1| 342|Caenorhabditis elegans cyclin-dependent
kinase CDK-4 protein.
Length = 342
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -1
Query: 297 HVYTKNVPRGRREQRDRHVESKGLR 223
H + +N+PRG EQ+ +HV ++ +R
Sbjct: 131 HTFLRNIPRGVPEQQAKHVTAQIVR 155
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +3
Query: 261 HAAPVEHSSYIHASPVVQHFSPVQHAPV-VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVE 437
H V +S + S V SP+ P +H+ + I + + H+ H +E V
Sbjct: 322 HDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHNLPVLIVMNNDGHLSTHRITLHEGVTGVG 381
Query: 438 DPHTGDHKSQHET-RDGDVVKGEYSLL 515
+ SQH DG ++G ++ +
Sbjct: 382 SDSQMSNFSQHNIYLDGPDIRGRHAAI 408
>AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical
protein W03F11.6e protein.
Length = 1039
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +3
Query: 261 HAAPVEHSSYIHASPVVQHFSPVQHAPV-VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVE 437
H V +S + S V SP+ P +H+ + I + + H+ H +E V
Sbjct: 320 HDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHNLPVLIVMNNDGHLSTHRITLHEGVTEVG 379
Query: 438 DPHTGDHKSQHET-RDGDVVKGEYSLL 515
+ SQH DG ++G ++ +
Sbjct: 380 SDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical
protein W03F11.6d protein.
Length = 1184
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +3
Query: 261 HAAPVEHSSYIHASPVVQHFSPVQHAPV-VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVE 437
H V +S + S V SP+ P +H+ + I + + H+ H +E V
Sbjct: 320 HDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHNLPVLIVMNNDGHLSTHRITLHEGVTEVG 379
Query: 438 DPHTGDHKSQHET-RDGDVVKGEYSLL 515
+ SQH DG ++G ++ +
Sbjct: 380 SDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
protein W03F11.6c protein.
Length = 1419
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +3
Query: 261 HAAPVEHSSYIHASPVVQHFSPVQHAPV-VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVE 437
H V +S + S V SP+ P +H+ + I + + H+ H +E V
Sbjct: 320 HDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHNLPVLIVMNNDGHLSTHRITLHEGVTEVG 379
Query: 438 DPHTGDHKSQHET-RDGDVVKGEYSLL 515
+ SQH DG ++G ++ +
Sbjct: 380 SDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +3
Query: 261 HAAPVEHSSYIHASPVVQHFSPVQHAPV-VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVE 437
H V +S + S V SP+ P +H+ + I + + H+ H +E V
Sbjct: 320 HDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHNLPVLIVMNNDGHLSTHRITLHEGVTEVG 379
Query: 438 DPHTGDHKSQHET-RDGDVVKGEYSLL 515
+ SQH DG ++G ++ +
Sbjct: 380 SDSQMSNFSQHNIYLDGPDIRGRHAAI 406
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,242,046
Number of Sequences: 27780
Number of extensions: 421475
Number of successful extensions: 1483
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1458
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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