Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_P11
(914 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0646 - 5219358-5219377,5219718-5220459,5220749-5221072 34 0.18
01_01_0020 + 147147-147313,148450-148548,148634-148742,148856-14... 33 0.24
11_06_0175 + 20926022-20926145,20926285-20926640,20926930-209276... 31 0.97
02_02_0718 - 13290764-13290897,13292375-13293041,13293364-132937... 31 1.3
09_03_0182 + 13164582-13164860,13164955-13165050 31 1.7
04_01_0129 + 1408408-1409055,1409107-1410013,1410145-1410294,141... 31 1.7
02_04_0080 - 19529575-19529643,19529756-19529938,19530061-195302... 31 1.7
07_01_1023 + 8840754-8842988,8843189-8843362 29 3.9
04_04_0973 + 29825057-29825344,29825447-29825552,29825750-298258... 29 3.9
01_05_0157 + 18699566-18699853,18699956-18700061,18700268-187007... 29 5.2
06_01_0499 - 3581145-3582425 29 6.8
>11_01_0646 - 5219358-5219377,5219718-5220459,5220749-5221072
Length = 361
Score = 33.9 bits (74), Expect = 0.18
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +3
Query: 243 DRGLRKKLTQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPKVQTGDPKLDLFTTY 422
D ++ A P ++ + R+S + + KK ++N+NK + DP +D+F
Sbjct: 181 DLAAPRRSIDSAAPRRSIDSAAPRRSIDSTASSSKKRKKNSNKLKNTLSSDPFMDVFANV 240
Query: 423 Q 425
Q
Sbjct: 241 Q 241
>01_01_0020 +
147147-147313,148450-148548,148634-148742,148856-148927,
149056-149061,150811-150915,151048-151539,151629-152025,
152178-153646,154010-154450,154543-155214
Length = 1342
Score = 33.5 bits (73), Expect = 0.24
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 198 MRQH*QNKMAAAMISDRGLRKKLTQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRP 377
++Q QN+ A ++ L KL A P + KP KR + + + +KK +N KRP
Sbjct: 406 LKQIAQNRPATKLLDSESL-PKLDAPAAPFQRLGKPLKRPVSPSSDEQEKKRPRNKTKRP 464
>11_06_0175 +
20926022-20926145,20926285-20926640,20926930-20927671,
20928012-20928031
Length = 413
Score = 31.5 bits (68), Expect = 0.97
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +3
Query: 243 DRGLRKKLTQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPKVQTGDPKLDLFTTY 422
D ++ A ++ + R+S + + KK +++NNK + DP +D+F
Sbjct: 233 DSAAARRSIDSAAARRSIDSATPRRSIDSTASSSKKRKKDNNKLKNTLSSDPFMDVFANV 292
Query: 423 Q 425
Q
Sbjct: 293 Q 293
>02_02_0718 -
13290764-13290897,13292375-13293041,13293364-13293719,
13294559-13294629,13295326-13295336
Length = 412
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +3
Query: 243 DRGLRKKLTQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPKVQTGDPKLDLFTTY 422
D ++ A P + + R+S + + KK ++++NK + DP +D+F
Sbjct: 219 DSSAPRRSIDSAAPRRIIDSAAPRRSIDSTASSSKKRKKDSNKLKHTLSSDPFMDVFANV 278
Query: 423 Q 425
Q
Sbjct: 279 Q 279
>09_03_0182 + 13164582-13164860,13164955-13165050
Length = 124
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +3
Query: 198 MRQH*QNKMAAAMISDRGLRKKLTQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRP 377
++Q QN+ A ++ L KL A P + KP K + + + +KK +N KRP
Sbjct: 13 LKQIAQNRPAIKLLDSESL-PKLDAPAAPFQRLGKPLKHPVSPSSDEHEKKRPRNKTKRP 71
>04_01_0129 + 1408408-1409055,1409107-1410013,1410145-1410294,
1419174-1419634,1419683-1419999,1420114-1420477
Length = 948
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = +3
Query: 282 PEKTPRKPSKRKSTAGASKADKKNEQNNNKRPKVQTGDPKLDLFTTYQPWVIQTYGDQAK 461
P++ P KRK K D+ +Q + + P T DP + L P+ +Y D K
Sbjct: 873 PKRHVVLPGKRKIVGVEDKTDEDYDQFDGQPPFTVTIDPSILLSNKDTPY---SYSDH-K 928
Query: 462 TKTITLKKYAR 494
TI +KY R
Sbjct: 929 EGTIVRRKYVR 939
>02_04_0080 -
19529575-19529643,19529756-19529938,19530061-19530210,
19530297-19530379,19530497-19530599,19530709-19530918,
19531023-19531183,19531275-19531351,19531483-19531610,
19531695-19531935,19532047-19532180,19532261-19532435,
19532587-19532656,19532746-19532803,19532887-19532994,
19533088-19533283,19533381-19533727,19534008-19534034,
19534334-19534336
Length = 840
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 255 RKKLTQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPKVQTGD 395
+K+ T+ E + PSK K TA + D + E + NK+ K + D
Sbjct: 31 KKQKTESKEQEGGQQAPSKNKKTADNEEHDGEQEPSKNKKLKAEESD 77
>07_01_1023 + 8840754-8842988,8843189-8843362
Length = 802
Score = 29.5 bits (63), Expect = 3.9
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +3
Query: 273 DAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPKVQTGDPKLDLFTTYQPWVIQTYGD 452
D+IP K + + T+ S NE NNN K T + D + P +T +
Sbjct: 121 DSIPSKKLIIKAAQHYTSSISTGGLCNEANNNTSSKTLTNESNCDTSSDKLP--EETIDN 178
Query: 453 -QAKTKTITLKKYARILRTLRGEECNSSDSSKFR 551
+K TIT ++ +I GE CN ++++ R
Sbjct: 179 ISSKVLTITAAQH-QIDSISTGELCNEANNNTSR 211
>04_04_0973 +
29825057-29825344,29825447-29825552,29825750-29825845,
29826335-29826690,29826980-29827721,29828064-29828083
Length = 535
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/61 (21%), Positives = 28/61 (45%)
Frame = +3
Query: 243 DRGLRKKLTQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPKVQTGDPKLDLFTTY 422
D ++ A ++ + R+S + + KK ++++NK + DP +D+F
Sbjct: 355 DSAAARRSIDSAAARRSIDSATPRRSIDSTASSSKKRKKDSNKLKNTLSSDPFMDVFANV 414
Query: 423 Q 425
Q
Sbjct: 415 Q 415
>01_05_0157 +
18699566-18699853,18699956-18700061,18700268-18700712,
18700852-18700880,18701014-18701207,18701497-18702211,
18702552-18702571
Length = 598
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/60 (21%), Positives = 29/60 (48%)
Frame = +3
Query: 246 RGLRKKLTQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPKVQTGDPKLDLFTTYQ 425
R + ++ A ++ + R+S + + KK ++++NK + DP +D+F Q
Sbjct: 419 REMPRRSIDSAAARRSIDSATPRQSIDSTASSSKKRKKDSNKLKNTLSSDPFMDVFANVQ 478
>06_01_0499 - 3581145-3582425
Length = 426
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -1
Query: 257 P*PPVADHSGSHLVLLVLTHFSGKXKVYYKVVAQH 153
P PP H G+ LT SG Y VVA H
Sbjct: 283 PSPPCVHHDGTSPATATLTELSGNKLCYAHVVAGH 317
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,242,805
Number of Sequences: 37544
Number of extensions: 355994
Number of successful extensions: 1179
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1179
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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