Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_P11
         (914 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024763-9|AAU20836.1|  404|Caenorhabditis elegans Hypothetical ...    33   0.22 
AC024763-8|AAK93863.1|  480|Caenorhabditis elegans Hypothetical ...    33   0.22 
Z72516-1|CAA96687.2|  156|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z46933-4|CAA87037.1|  452|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z77136-8|CAB00885.2|  278|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AF125447-3|AAN60502.1|  217|Caenorhabditis elegans Hypothetical ...    29   3.5  
AF125447-2|AAD12808.1|  250|Caenorhabditis elegans Hypothetical ...    29   3.5  
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ...    29   4.6  
AL110485-14|CAB60362.1|  109|Caenorhabditis elegans Hypothetical...    29   4.6  
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.    29   4.6  
U97405-1|AAB53007.1|  327|Caenorhabditis elegans Hypothetical pr...    28   8.1  
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p...    28   8.1  
AF040640-1|AAD34652.1|  602|Caenorhabditis elegans Hypothetical ...    28   8.1  

>AC024763-9|AAU20836.1|  404|Caenorhabditis elegans Hypothetical
           protein Y39A3CL.7b protein.
          Length = 404

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 303 PSKRKSTAGASKADKKNEQNNNKRPKVQTGDPKLDLF 413
           P  RKS   + K DKK  + +N+R + + GD K + F
Sbjct: 358 PIDRKSRTNSDKYDKKRAKKSNRRDRSRFGDEKFEFF 394


>AC024763-8|AAK93863.1|  480|Caenorhabditis elegans Hypothetical
           protein Y39A3CL.7a protein.
          Length = 480

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 303 PSKRKSTAGASKADKKNEQNNNKRPKVQTGDPKLDLF 413
           P  RKS   + K DKK  + +N+R + + GD K + F
Sbjct: 434 PIDRKSRTNSDKYDKKRAKKSNRRDRSRFGDEKFEFF 470


>Z72516-1|CAA96687.2|  156|Caenorhabditis elegans Hypothetical
           protein T25G3.1 protein.
          Length = 156

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 291 TPRKPSKRKSTAGASKADKKNEQNNNKRPKVQTG 392
           T +KP+KR   + A+  ++K ++ N   PKVQ G
Sbjct: 111 TFKKPTKRAGDSAAADEEEKKKKKNAPLPKVQKG 144


>Z46933-4|CAA87037.1|  452|Caenorhabditis elegans Hypothetical
           protein F34H10.4 protein.
          Length = 452

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +3

Query: 363 NNKRPKVQTGDPKLDLFTTYQPWVIQTYGDQAKTKTI 473
           N+ +P  Q  D   D  T Y PW I+ +  ++  K +
Sbjct: 125 NHDQPAEQPSDKSTDDSTGYPPWAIEAFNSESNIKNV 161


>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical
           protein C11E4.6 protein.
          Length = 1170

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +3

Query: 492 RILRTLRGEECNSSDSSKFRFWVKAKGFYVGKPPG-YDAKPADSIV 626
           +I   L G+ C  +  SKF  W K++     +PP  YD  P +S +
Sbjct: 452 QIASVLPGDNCAYNSPSKFNEWQKSQLTISNRPPAPYDNVPNNSAI 497


>Z77136-8|CAB00885.2|  278|Caenorhabditis elegans Hypothetical
           protein ZC376.8 protein.
          Length = 278

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +3

Query: 225 AAAMISDRGLRKKLTQDAIPEKTPRKPSKRKSTAGASKADK-KNEQNNNKRPKVQTGDPK 401
           A   I ++G  KK  + A  +K+ +K  K K+     + DK K ++ +NK    ++ DPK
Sbjct: 73  AVKKIEEKGEEKKPEEPAKSKKSEKK-EKSKNEGSKKEEDKEKEKEKSNKAEDKKSEDPK 131


>AF125447-3|AAN60502.1|  217|Caenorhabditis elegans Hypothetical
           protein Y14H12B.1b protein.
          Length = 217

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +3

Query: 237 ISDRGLRKKLTQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPK 380
           +S R +RK+     +PE +    + RKST   +K +K  E+     P+
Sbjct: 47  LSTRSMRKRSVPIPLPEDSKEMVASRKSTQKKAKKEKTPEKEATPEPE 94


>AF125447-2|AAD12808.1|  250|Caenorhabditis elegans Hypothetical
           protein Y14H12B.1a protein.
          Length = 250

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +3

Query: 237 ISDRGLRKKLTQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPK 380
           +S R +RK+     +PE +    + RKST   +K +K  E+     P+
Sbjct: 80  LSTRSMRKRSVPIPLPEDSKEMVASRKSTQKKAKKEKTPEKEATPEPE 127


>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
           protein.
          Length = 1829

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 558 PRNETWSCPNCYT 520
           P+ ETWSCP C T
Sbjct: 352 PKEETWSCPRCET 364


>AL110485-14|CAB60362.1|  109|Caenorhabditis elegans Hypothetical
           protein Y46G5A.20 protein.
          Length = 109

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +3

Query: 261 KLTQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNK 371
           KL QD+ P   PR+ S   S++ +S     +  N+++
Sbjct: 24  KLCQDSFPRHAPRRRSSSSSSSSSSSTSSSSSSNSSE 60


>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
          Length = 1829

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 558 PRNETWSCPNCYT 520
           P+ ETWSCP C T
Sbjct: 352 PKEETWSCPRCET 364


>U97405-1|AAB53007.1|  327|Caenorhabditis elegans Hypothetical
           protein T09B4.5a protein.
          Length = 327

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +3

Query: 246 RGLRKKLTQDAIPEKTPRKPSKRKSTAGA-SKADKKNEQNNNKRPKVQT 389
           R   K  T+     KTP+ PSK  S+A A S++  +    N  R    T
Sbjct: 59  RSASKSATRGRTASKTPKTPSKTPSSASARSRSRSRGRPTNASRLSAST 107


>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
            protein R11G1.1 protein.
          Length = 1656

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = +3

Query: 288  KTPRKPSKRKSTAGASKADKKNEQNNNKRPKV 383
            +TP+KP  RKS+A +S + K+++  +  + +V
Sbjct: 1227 QTPKKPESRKSSAKSSASSKRSKIPSTSQSRV 1258


>AF040640-1|AAD34652.1|  602|Caenorhabditis elegans Hypothetical
           protein F09D1.1 protein.
          Length = 602

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 288 KTPRKPSKRKSTAGASKADKKNEQNNNKRPK 380
           K+P K  +R+ST   S+ DKK  +++ K  K
Sbjct: 7   KSPEKVERRRSTQEDSEKDKKRSRDDRKTEK 37


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,760,378
Number of Sequences: 27780
Number of extensions: 295622
Number of successful extensions: 1202
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)