Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_P09
         (830 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr...    43   6e-04
BT004893-1|AAO47871.1|  541|Drosophila melanogaster RE51884p pro...    30   4.5  
AY069079-1|AAL39224.1|  541|Drosophila melanogaster GH09383p pro...    30   4.5  
AE014297-3582|AAN14008.1|  541|Drosophila melanogaster CG6668-PB...    30   4.5  
AE014297-3581|AAF56318.1|  541|Drosophila melanogaster CG6668-PA...    30   4.5  
X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of ...    29   7.8  

>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
           protein.
          Length = 1053

 Score = 42.7 bits (96), Expect = 6e-04
 Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
 Frame = +2

Query: 254 LNMFEVQQKKHYADQNTSSGTPQERECSIRKSCN--NDSVTSMEDLSHEEIVTSYVLAHV 427
           L  FE ++       N  +  P   EC    +        T   ++  EEI  + VLAH+
Sbjct: 96  LQRFETEETPAATFLNLLNSRPTAAECYAVYASRLVTQLTTKWRNMEIEEIAVTTVLAHM 155

Query: 428 AQFDCRRHHMAFTNGNTTRNKLLQEIKA 511
           A  D R   + FT+   TR+KL  E+KA
Sbjct: 156 ANIDSRLQRVLFTSNVRTRSKLQAELKA 183


>BT004893-1|AAO47871.1|  541|Drosophila melanogaster RE51884p
           protein.
          Length = 541

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = -2

Query: 478 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIFHRGNRVVI 353
           C +V     M S+V++ N+SQN++ DD    Q+F    R+ +
Sbjct: 135 CATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLAL 176


>AY069079-1|AAL39224.1|  541|Drosophila melanogaster GH09383p
           protein.
          Length = 541

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = -2

Query: 478 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIFHRGNRVVI 353
           C +V     M S+V++ N+SQN++ DD    Q+F    R+ +
Sbjct: 135 CATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLAL 176


>AE014297-3582|AAN14008.1|  541|Drosophila melanogaster CG6668-PB,
           isoform B protein.
          Length = 541

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = -2

Query: 478 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIFHRGNRVVI 353
           C +V     M S+V++ N+SQN++ DD    Q+F    R+ +
Sbjct: 135 CATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLAL 176


>AE014297-3581|AAF56318.1|  541|Drosophila melanogaster CG6668-PA,
           isoform A protein.
          Length = 541

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = -2

Query: 478 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIFHRGNRVVI 353
           C +V     M S+V++ N+SQN++ DD    Q+F    R+ +
Sbjct: 135 CATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLAL 176


>X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of
           variegation protein3-7 protein.
          Length = 1169

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
 Frame = +2

Query: 197 PSSLHQK*DQDSTLTGVTCLNM-FEVQQKKHYADQNTSSGTPQERECSIRKSCNNDSVT- 370
           P  LH+  D D TL      N+   V  +  +  Q+  S + QEREC+      ++  T 
Sbjct: 122 PWILHE--DSDGTLAFCLYCNISINVNNRSRHIQQHNVSLSHQERECNYLAFKKSEEETR 179

Query: 371 ---SMEDLSHEEIVTSYVLA 421
              S  ++ HE    SYV A
Sbjct: 180 GAISSNEIKHEFGTKSYVAA 199


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,567,933
Number of Sequences: 53049
Number of extensions: 660379
Number of successful extensions: 1369
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1369
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)