Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_P08
(848 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 311 1e-85
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 308 7e-85
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 167 2e-42
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 118 1e-27
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.21
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 30 0.36
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 2.5
SPCC330.08 |alg11|gmd3|alpha-1,2-mannosyltransferase Alg11|Schiz... 27 3.4
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 27 4.4
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 26 5.9
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 26 7.8
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 311 bits (763), Expect = 1e-85
Identities = 134/192 (69%), Positives = 165/192 (85%)
Frame = +2
Query: 47 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 226
+D F TFFSETG GK VPR+++VDLEP V+D+VRTG Y+ LFHPEQ++TGKEDA+NNYAR
Sbjct: 50 NDGFGTFFSETGQGKFVPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYAR 109
Query: 227 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKS 406
GHYT+GKE++D VL+RIR++AD C+GLQGFL+FH LL+ERL+++YGKKS
Sbjct: 110 GHYTVGKEMIDSVLERIRRMADNCSGLQGFLVFHSFGGGTGSGLGALLLERLNMEYGKKS 169
Query: 407 KLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYT 586
L+F++YPAPQVST+VVEPYNS+LTTH TL++SDC FMVDNEA YDICRRNLDIERPTY
Sbjct: 170 NLQFSVYPAPQVSTSVVEPYNSVLTTHATLDNSDCTFMVDNEACYDICRRNLDIERPTYE 229
Query: 587 NLNRLVGQIVSS 622
NLNRL+ Q+VSS
Sbjct: 230 NLNRLIAQVVSS 241
Score = 68.5 bits (160), Expect = 1e-12
Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Frame = +1
Query: 694 LTPVSTSHWX--TYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRS 840
L P H+ TY+P++SA KA+HE SV EITN CFEP NQMVKCDPR+
Sbjct: 263 LVPYPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRT 313
Score = 64.9 bits (151), Expect = 1e-11
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = +3
Query: 624 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 719
ITASLRF G+LNVDL EFQTNLVPYPRIHFPL
Sbjct: 242 ITASLRFAGSLNVDLNEFQTNLVPYPRIHFPL 273
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 308 bits (756), Expect = 7e-85
Identities = 136/205 (66%), Positives = 168/205 (81%)
Frame = +2
Query: 8 DGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQL 187
+G M + D F+TFFSETG GK+VPR+++VDLEP V+D+VRTG YR LFHPEQL
Sbjct: 33 NGYMNPETASQNSDGGFSTFFSETGQGKYVPRSIYVDLEPNVIDQVRTGPYRDLFHPEQL 92
Query: 188 ITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXL 367
ITGKEDA+NNYARGHYT+GKE+VD V D+IR++AD C+GLQGFL+FH L
Sbjct: 93 ITGKEDASNNYARGHYTVGKELVDEVTDKIRRIADNCSGLQGFLVFHSFGGGTGSGFGAL 152
Query: 368 LMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 547
L+ERL+++Y KKSKL+F++YPAPQVST+VVEPYNS+LTTH TL+ +DC FMVDNE+ YDI
Sbjct: 153 LLERLAMEYTKKSKLQFSVYPAPQVSTSVVEPYNSVLTTHATLDLADCTFMVDNESCYDI 212
Query: 548 CRRNLDIERPTYTNLNRLVGQIVSS 622
CRRNLDIERP+Y NLNRL+ Q+VSS
Sbjct: 213 CRRNLDIERPSYENLNRLIAQVVSS 237
Score = 69.7 bits (163), Expect = 5e-13
Identities = 32/51 (62%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Frame = +1
Query: 694 LTPVSTSHWX--TYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRS 840
L P H+ TYAP++SA KA+HE SV EITN CFEP NQMVKCDPR+
Sbjct: 259 LVPYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRA 309
Score = 66.5 bits (155), Expect = 4e-12
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = +3
Query: 624 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 719
ITASLRF+G+LNVDL EFQTNLVPYPRIHFPL
Sbjct: 238 ITASLRFEGSLNVDLAEFQTNLVPYPRIHFPL 269
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 167 bits (405), Expect = 2e-42
Identities = 77/190 (40%), Positives = 115/190 (60%)
Frame = +2
Query: 50 DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 229
+ N +F+E GK+VPRAV VDLEP +D V++G + LF P+ +I G+ A N +A+G
Sbjct: 45 ERLNVYFNEAAGGKYVPRAVLVDLEPGTMDAVKSGKFGNLFRPDNIIYGQSGAGNIWAKG 104
Query: 230 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 409
HYT G E+ D VLD +R+ A+ C LQGF + H LL+ ++ +Y +
Sbjct: 105 HYTEGAELADAVLDVVRREAEACDALQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRMM 164
Query: 410 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 589
F++ PAP+ S VVEPYN+ L+ H +E+SD F +DNEA+ I L I+ P+Y +
Sbjct: 165 ATFSVAPAPKSSDTVVEPYNATLSMHQLVENSDETFCIDNEALSSIFANTLKIKSPSYDD 224
Query: 590 LNRLVGQIVS 619
LN LV +++
Sbjct: 225 LNHLVSAVMA 234
Score = 42.3 bits (95), Expect = 8e-05
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Frame = +3
Query: 624 ITASLRFDGALNVDLTEFQTNLVPYPRIHF------PLXHVRASHLCREGLP*TAFRRRD 785
+T S RF G LN DL + N+VP+PR+HF PL + +S +P + D
Sbjct: 236 VTTSFRFPGELNSDLRKLAVNMVPFPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFD 295
Query: 786 HKRMLRARQP 815
M+ A P
Sbjct: 296 ANNMMVAADP 305
Score = 30.7 bits (66), Expect = 0.27
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 727 YAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPR 837
+AP+ + + + +SV E+T F+ N MV DPR
Sbjct: 270 FAPLAAIGSSSFQAVSVPELTQQMFDANNMMVAADPR 306
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 118 bits (283), Expect = 1e-27
Identities = 64/197 (32%), Positives = 108/197 (54%), Gaps = 3/197 (1%)
Frame = +2
Query: 44 GDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANN 217
G D + FF ++ +++PRA+ +DLEP VV+ + + TY L++PE ++ K A NN
Sbjct: 44 GVDRKDVFFYQSDDTRYIPRAILIDLEPRVVNNILSDTYGSLYNPENILITKNGGGAGNN 103
Query: 218 YARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYG 397
+A G Y+ + I + ++D I + AD L+GF + H L+ERL+ Y
Sbjct: 104 WANG-YSHAERIFEDIMDMIDREADGSDSLEGFSLLHSIAGGTGSGLGSFLLERLNDRYP 162
Query: 398 KKSKLEFAIYPAPQ-VSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 574
KK ++++P Q VS VV+PYNS+L ++D ++DN A+ I L +
Sbjct: 163 KKIIQTYSVFPNSQSVSDVVVQPYNSLLALKRLTLNADSVVVLDNAALAHIAADRLHTQN 222
Query: 575 PTYTNLNRLVGQIVSSN 625
PT+ N+LV ++S++
Sbjct: 223 PTFHQQNQLVSTVMSAS 239
Score = 33.1 bits (72), Expect = 0.051
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 627 TASLRFDGALNVDLTEFQTNLVPYPRIHFPL 719
T +LR+ G +N DL +L+P PR HF L
Sbjct: 240 TTTLRYPGYMNNDLVSIIASLIPSPRCHFLL 270
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.1 bits (67), Expect = 0.21
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +2
Query: 674 VPD*LGALPPYPLPTGSR----TRQSSLPRRPTMNSFPSPRSQTHASSPPTR 817
VP PP P P+ T +SS+P P N+ PSP S + AS+ P R
Sbjct: 1229 VPVPTAKAPPVPAPSSEAPSVSTPRSSVPS-PHSNASPSPTSSSMASAAPAR 1279
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 30.3 bits (65), Expect = 0.36
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 701 PYPLPTGSRTRQSSLPRRPTMNSFPSPRSQTHASSPPT 814
PY +P RT S R T+ S SP S+ HA + T
Sbjct: 345 PYLVPNSGRTLNSENARESTIRSVNSPFSEDHADASLT 382
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.5 bits (58), Expect = 2.5
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Frame = +2
Query: 701 PYPLPTGSRTRQSSL--PRRPTMNSFPSPR----SQTHASSPPTRW*NATPXH 841
P P ++ + SL P RP + + P P+ S HA PP + NA P H
Sbjct: 1339 PQQAPLENQFSKMSLEPPVRPAVPTSPKPQIPDSSNVHAPPPPVQPMNAMPSH 1391
>SPCC330.08 |alg11|gmd3|alpha-1,2-mannosyltransferase
Alg11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 471
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = -2
Query: 700 G*GTKLVWNSVRSTFRAPSNLKEAVIRGDNLSDETIQVGVGWALNVEITAADVI 539
G G +++W +V+S N+ V GDN+S I V +++ ++ ++
Sbjct: 68 GGGERVLWTAVKSVQTEFPNVISVVYTGDNVSKAEILRRVKNTFEIDLDSSKIV 121
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 689 GALPPYPLPTGSRTRQSSLPRRPTMNSFP 775
G LP P+P S R+ S+P P+ S P
Sbjct: 643 GRLPKVPIPPLSNMRRGSVPIIPSSASLP 671
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 26.2 bits (55), Expect = 5.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 734 QSSLPRRPTMNSFPSPRSQTHASSPPTR 817
+ SLPRRP+ +P S T ++ PP +
Sbjct: 738 RGSLPRRPSSALLTNPISITKSNPPPVK 765
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 25.8 bits (54), Expect = 7.8
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +1
Query: 10 WPDAHRQDHRGWRRFFQHFLQR 75
W A R D R R FQHFLQR
Sbjct: 590 WLAACRSDPRCRRLDFQHFLQR 611
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,496,424
Number of Sequences: 5004
Number of extensions: 71581
Number of successful extensions: 228
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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