Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_P07
(827 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0490 - 3782195-3782305,3782929-3783021,3783199-3783294,378... 121 8e-28
02_01_0451 - 3237849-3238061,3238142-3238268,3238418-3238656,323... 103 2e-22
02_05_0685 + 30891289-30891810,30892740-30892915,30893379-308934... 73 4e-13
12_01_1023 + 10458092-10458397,10459126-10459254,10459335-104595... 69 6e-12
02_01_0055 + 410661-411380,411481-413733,414486-414875,414983-41... 52 7e-07
03_05_1091 + 30322035-30322739,30322861-30324043,30324114-303251... 48 7e-06
09_01_0155 - 2301903-2302151,2302334-2302491,2302651-2302819,230... 33 0.37
08_02_1517 + 27642361-27643218 33 0.37
03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,589... 31 1.5
01_01_1165 - 9267891-9268145,9268395-9268510,9268991-9269127,926... 29 6.0
09_02_0212 + 5820866-5821031,5821172-5821224,5821512-5821639,582... 28 7.9
>11_01_0490 -
3782195-3782305,3782929-3783021,3783199-3783294,
3783373-3783521,3783886-3784039,3784110-3784205,
3784290-3784379,3784856-3785014,3785150-3785371,
3785552-3785668,3785753-3785824,3786768-3786836,
3786947-3787051,3787248-3787562,3787814-3788809
Length = 947
Score = 121 bits (291), Expect = 8e-28
Identities = 69/131 (52%), Positives = 89/131 (67%), Gaps = 10/131 (7%)
Frame = +3
Query: 408 CTHEVAIPPN----QEYAPLLPLTT-----EPVKQYSFILDPFQKEAILCIDNLQSVLVS 560
C HEVA+P ++ A L++ E K Y F LDPFQ +I C++ +SVLVS
Sbjct: 45 CIHEVAVPKGYAAAKDEAVHGTLSSPAFHGEMAKAYPFQLDPFQSVSIACLERNESVLVS 104
Query: 561 AHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSXEFMML-V*XLVMYYQS 737
AHTSAGKT +AEYAIA+S ++KQRVIYT+P+KALSNQKYRE S EF + + + Q
Sbjct: 105 AHTSAGKTAIAEYAIAMSFRDKQRVIYTSPLKALSNQKYRELSQEFSDVGLMTGDVTLQP 164
Query: 738 PASCLIMTTEI 770
A+CL+MTTEI
Sbjct: 165 NATCLVMTTEI 175
>02_01_0451 -
3237849-3238061,3238142-3238268,3238418-3238656,
3238937-3239151,3239569-3240031,3240562-3240715,
3241724-3241833,3242540-3242797,3242843-3242854,
3243492-3243545,3244202-3244312,3244390-3244545,
3244798-3245201,3245405-3245501,3246041-3246050,
3246097-3246164,3246652-3246762,3246874-3247074,
3247384-3247485,3247980-3248087,3248209-3248411,
3248563-3248680,3248774-3248854,3248958-3249500,
3249602-3249730
Length = 1428
Score = 103 bits (247), Expect = 2e-22
Identities = 53/96 (55%), Positives = 68/96 (70%)
Frame = +3
Query: 483 QYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKAL 662
+Y F LD FQKEAI + +SV V+AHTSAGKTVVAEYA AL+ K+ R +YT PIK +
Sbjct: 383 EYPFELDKFQKEAIYYLQKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTI 442
Query: 663 SNQKYREFSXEFMMLV*XLVMYYQSPASCLIMTTEI 770
SNQKYR+F +F + + + + A+CLIMTTEI
Sbjct: 443 SNQKYRDFCGKFDVGLLTGDVSIRPEATCLIMTTEI 478
>02_05_0685 +
30891289-30891810,30892740-30892915,30893379-30893492,
30893846-30893954,30894038-30894124,30895137-30895736,
30895823-30896101,30896808-30896897,30897151-30897507,
30897924-30898160,30898733-30898953,30899856-30899955,
30900042-30900188,30900287-30900385
Length = 1045
Score = 72.5 bits (170), Expect = 4e-13
Identities = 44/98 (44%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Frame = +3
Query: 486 YSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALS 665
Y F +D FQ+ AI SV+VSA TS+GKT++AE A ++ +R+ YTTP+KALS
Sbjct: 166 YDFPIDKFQRLAIQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARGRRLFYTTPLKALS 225
Query: 666 NQKYREFSXEFMMLV*XLV---MYYQSPASCLIMTTEI 770
NQK+R+F F L+ A LIMTTEI
Sbjct: 226 NQKFRDFRNTFGDHNVGLLTGDSAINKDAQILIMTTEI 263
>12_01_1023 +
10458092-10458397,10459126-10459254,10459335-10459553,
10459649-10459987,10460095-10460199,10460697-10460807,
10461438-10461688,10462023-10462146,10462440-10462716,
10463212-10463357,10463449-10463598,10463678-10463910,
10464246-10464375,10464406-10464510,10464636-10464914
Length = 967
Score = 68.5 bits (160), Expect = 6e-12
Identities = 54/133 (40%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Frame = +3
Query: 408 CTHEVAIPPNQEYAPLLPLT-----------TEPVKQYSFILDPFQKEAILCIDNLQSVL 554
C H+V+ P + Y P P T P K + F LDPFQ EAI C+DN +SV+
Sbjct: 45 CVHDVSYP--EGYDPSAPATHLLNGVGGAEGAGPAKTFPFQLDPFQAEAIRCLDNGESVM 102
Query: 555 VSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSXEFMML-V*XLVMYY 731
QRVIYT+PIKALSNQKYREF EF + + +
Sbjct: 103 ------------------------QRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVTI 138
Query: 732 QSPASCLIMTTEI 770
+ ASCL+MTTEI
Sbjct: 139 EPNASCLVMTTEI 151
>02_01_0055 + 410661-411380,411481-413733,414486-414875,414983-418153
Length = 2177
Score = 51.6 bits (118), Expect = 7e-07
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 7/73 (9%)
Frame = +3
Query: 501 DPFQKEAILCIDNLQ-SVLVSAHTSAGKTVVAEYAI------ALSLKNKQRVIYTTPIKA 659
+P Q + + N SVLV+A T +GKT+ AE+AI A+S ++ RV+Y PI+A
Sbjct: 1363 NPIQTQVFTVLYNTDDSVLVAAPTGSGKTICAEFAILRNHQKAVSGESNMRVVYIAPIEA 1422
Query: 660 LSNQKYREFSXEF 698
L+ ++YR++ +F
Sbjct: 1423 LAKERYRDWEQKF 1435
>03_05_1091 + 30322035-30322739,30322861-30324043,30324114-30325105,
30326409-30326798,30326896-30330060
Length = 2144
Score = 48.4 bits (110), Expect = 7e-06
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Frame = +3
Query: 501 DPFQKEAILCIDNLQ-SVLVSAHTSAGKTVVAEYAI------ALSLKNKQRVIYTTPIKA 659
+P Q + N SVLV+A T +GKT+ AE+AI A+S + RV+Y PI+A
Sbjct: 1332 NPIQTQVFTASYNSDDSVLVAAPTGSGKTICAEFAILRNHQKAVSGDSNMRVVYVAPIEA 1391
Query: 660 LSNQKYREFSXEF 698
L+ ++Y+++ +F
Sbjct: 1392 LAKERYKDWESKF 1404
>09_01_0155 -
2301903-2302151,2302334-2302491,2302651-2302819,
2303796-2304839,2305792-2306075,2306318-2307333,
2307937-2308085
Length = 1022
Score = 32.7 bits (71), Expect = 0.37
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +3
Query: 471 EPVKQYSFILDPFQKEAI-LCIDNLQSVLV-SAHTSAGKTVVAEYAIALSLKNKQRVIYT 644
E +K+ + D Q +AI L ++N + VL+ GKT + Y IA +++ +RV+ T
Sbjct: 537 ELLKKNKYDFDASQLKAITLGLNNKRPVLIIQGPPGTGKTGLLSYLIACAVRKGERVLVT 596
Query: 645 TPIKALSNQKYREFS 689
P A + + S
Sbjct: 597 APSNAAVDNMVEKLS 611
>08_02_1517 + 27642361-27643218
Length = 285
Score = 32.7 bits (71), Expect = 0.37
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 195 SCQMLKMLKNQTWKS*LLLEISVHMMTSSTLIPLYQK-SLAKK 320
SC+++K+L + +LEIS H+++ T++P Y K SL K
Sbjct: 195 SCRVVKLLAEARETAFSMLEISSHLLSKQTVMPSYSKWSLVSK 237
>03_02_0143 -
5888005-5888088,5888818-5888949,5889485-5889634,
5890540-5890710,5890840-5891007,5891139-5891234,
5891777-5891839,5891949-5892114,5892207-5892274,
5892646-5892789,5893111-5893176,5893329-5893520,
5894567-5894657,5895241-5895329,5895521-5895583,
5895698-5895823,5895902-5895991,5896059-5896181,
5896503-5896619,5896704-5896904,5897643-5897723,
5897897-5897977,5898083-5898184,5898264-5898488,
5898571-5898726,5898798-5899010,5899306-5899455,
5900082-5900204,5900299-5900364,5900555-5900620,
5900686-5900817,5900891-5900965,5901355-5901438,
5901516-5901668,5901741-5901806,5902044-5902205,
5902272-5902388,5902495-5902566,5902702-5902761,
5902869-5902985,5904131-5904430,5904518-5904622,
5905710-5905775,5905853-5906297,5906399-5906567,
5906684-5906736,5906819-5906925
Length = 1981
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 10/59 (16%)
Frame = +3
Query: 543 QSVLVSAHTSAGKTVVAEYAIALSLK----------NKQRVIYTTPIKALSNQKYREFS 689
+++LV A T AGKT +A A+ +K N+ +++Y P+KAL+ + FS
Sbjct: 451 ENILVCAPTGAGKTNIAMIAVLHEVKQHFRDGILHKNEFKIVYVAPMKALAAEVTSTFS 509
>01_01_1165 -
9267891-9268145,9268395-9268510,9268991-9269127,
9269645-9269808,9269892-9269972,9270783-9270962,
9271489-9271929,9273234-9273344,9274355-9274463,
9274618-9274643,9274823-9274903,9275013-9275211,
9275374-9275449,9275553-9275769,9276117-9276155,
9276684-9276783,9276962-9277084,9277171-9277895
Length = 1059
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 474 PVKQYSFILDPFQKEAILCIDNL-QSVLVSAHTSAGKTVV 590
P + Y I DP + +LC L +SVL +A +AGKTV+
Sbjct: 12 PAQDYPTI-DPTSFDVVLCGTGLPESVLAAACAAAGKTVL 50
>09_02_0212 +
5820866-5821031,5821172-5821224,5821512-5821639,
5821728-5821833,5821998-5822132,5822211-5822262,
5822383-5822447,5823984-5824090,5824596-5824792,
5825145-5825260,5825368-5825453,5825525-5825597,
5826886-5826977,5827069-5827207,5827275-5827369,
5827804-5827978,5828345-5828491
Length = 643
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 278 QYADTSVSKKPREEEEDSELITDIN 352
+ AD S K+PR ++ED EL+ +N
Sbjct: 552 EIADESPPKRPRYDKEDEELLEKVN 576
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,926,900
Number of Sequences: 37544
Number of extensions: 335834
Number of successful extensions: 931
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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