Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_P07
(827 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D29641-1|BAA06124.2| 1046|Homo sapiens KIAA0052 protein protein. 163 5e-40
BC113509-1|AAI13510.1| 1042|Homo sapiens superkiller viralicidic... 163 5e-40
BC104996-1|AAI04997.1| 1042|Homo sapiens superkiller viralicidic... 163 5e-40
BC065258-1|AAH65258.1| 1043|Homo sapiens SKIV2L2 protein protein. 163 5e-40
BC028604-1|AAH28604.3| 1042|Homo sapiens superkiller viralicidic... 163 5e-40
Z48796-1|CAA88733.1| 1246|Homo sapiens helicase protein. 106 1e-22
X98378-1|CAA67024.1| 1246|Homo sapiens SKI2W protein protein. 106 1e-22
CR753822-4|CAM26058.1| 1246|Homo sapiens superkiller viralicidic... 106 1e-22
BX005143-14|CAM25870.1| 1246|Homo sapiens superkiller viralicidi... 106 1e-22
BC015758-1|AAH15758.1| 1246|Homo sapiens superkiller viralicidic... 106 1e-22
AL844853-15|CAI41863.1| 1246|Homo sapiens superkiller viralicidi... 106 1e-22
AL662849-12|CAI17460.1| 1246|Homo sapiens superkiller viralicidi... 106 1e-22
AL645922-13|CAI41730.1| 1246|Homo sapiens superkiller viralicidi... 106 1e-22
AL049547-13|CAB89307.1| 1245|Homo sapiens dJ34F7.7 (superkiller ... 106 1e-22
AF059675-1|AAC78607.1| 1246|Homo sapiens putative RNA helicase S... 106 1e-22
AF019413-6|AAB67978.1| 1246|Homo sapiens helicase protein. 106 1e-22
U09877-1|AAB52523.1| 1245|Homo sapiens helicase-like protein pro... 105 3e-22
BC112891-1|AAI12892.1| 1887|Homo sapiens ASCC3L1 protein protein. 45 3e-04
BC065924-1|AAH65924.1| 1821|Homo sapiens ASCC3L1 protein protein. 45 3e-04
BC007577-1|AAH07577.1| 1308|Homo sapiens ASCC3L1 protein protein. 45 3e-04
AY572488-1|AAS78571.1| 2136|Homo sapiens 200 kDa U5 snRNP-specif... 45 3e-04
AK024391-1|BAB14906.1| 1811|Homo sapiens protein ( Homo sapiens ... 45 3e-04
AB018331-1|BAA34508.2| 2026|Homo sapiens KIAA0788 protein protein. 45 3e-04
BC038115-1|AAH38115.1| 1712|Homo sapiens hypothetical protein FL... 44 5e-04
BC007820-1|AAH07820.1| 299|Homo sapiens FLJ20035 protein protein. 44 5e-04
AK001649-1|BAA91809.1| 1174|Homo sapiens protein ( Homo sapiens ... 44 5e-04
Z70200-1|CAA94089.1| 1701|Homo sapiens U5 snRNP-specific 200kD p... 42 0.003
X90568-1|CAA62188.1|26926|Homo sapiens titin protein. 35 0.31
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein. 35 0.31
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein. 35 0.31
BX323048-2|CAO03501.1| 1435|Homo sapiens HFM1, ATP-dependent DNA... 35 0.41
BC132823-1|AAI32824.1| 471|Homo sapiens HFM1 protein protein. 35 0.41
AB204867-1|BAF45466.1| 1435|Homo sapiens helicase-like protein H... 35 0.41
BC041785-1|AAH41785.1| 599|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 33 1.3
AK093661-1|BAC04214.1| 360|Homo sapiens protein ( Homo sapiens ... 33 1.3
AK001652-1|BAA91812.1| 491|Homo sapiens protein ( Homo sapiens ... 33 1.3
AJ010840-1|CAA09374.1| 420|Homo sapiens ATP-dependent RNA helic... 33 1.3
AB208938-1|BAD92175.1| 512|Homo sapiens ATP-dependent RNA helic... 33 1.3
AY338826-1|AAR08421.2| 2590|Homo sapiens DNA polymerase theta pr... 30 8.9
AY032677-1|AAK39635.1| 2724|Homo sapiens DNA polymerase theta pr... 30 8.9
>D29641-1|BAA06124.2| 1046|Homo sapiens KIAA0052 protein protein.
Length = 1046
Score = 163 bits (397), Expect = 5e-40
Identities = 82/133 (61%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Frame = +3
Query: 375 IVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVL 554
+ + ++ET EGCTHEVA+P ++Y PL P + K+Y FILD FQ+EAI C+DN QSVL
Sbjct: 103 VKVQSVETVEGCTHEVALPAEEDYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVL 162
Query: 555 VSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSXEFMMLV*XLVMYYQ 734
VSAHTSAGKTV AEYAIAL+L+ KQRVI+T+PIKALSNQKYRE EF +
Sbjct: 163 VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 222
Query: 735 SP-ASCLIMTTEI 770
+P ASCL+MTTEI
Sbjct: 223 NPTASCLVMTTEI 235
>BC113509-1|AAI13510.1| 1042|Homo sapiens superkiller viralicidic
activity 2-like 2 (S. cerevisiae) protein.
Length = 1042
Score = 163 bits (397), Expect = 5e-40
Identities = 82/133 (61%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Frame = +3
Query: 375 IVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVL 554
+ + ++ET EGCTHEVA+P ++Y PL P + K+Y FILD FQ+EAI C+DN QSVL
Sbjct: 99 VKVQSVETVEGCTHEVALPAEEDYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVL 158
Query: 555 VSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSXEFMMLV*XLVMYYQ 734
VSAHTSAGKTV AEYAIAL+L+ KQRVI+T+PIKALSNQKYRE EF +
Sbjct: 159 VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218
Query: 735 SP-ASCLIMTTEI 770
+P ASCL+MTTEI
Sbjct: 219 NPTASCLVMTTEI 231
>BC104996-1|AAI04997.1| 1042|Homo sapiens superkiller viralicidic
activity 2-like 2 (S. cerevisiae) protein.
Length = 1042
Score = 163 bits (397), Expect = 5e-40
Identities = 82/133 (61%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Frame = +3
Query: 375 IVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVL 554
+ + ++ET EGCTHEVA+P ++Y PL P + K+Y FILD FQ+EAI C+DN QSVL
Sbjct: 99 VKVQSVETVEGCTHEVALPAEEDYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVL 158
Query: 555 VSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSXEFMMLV*XLVMYYQ 734
VSAHTSAGKTV AEYAIAL+L+ KQRVI+T+PIKALSNQKYRE EF +
Sbjct: 159 VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218
Query: 735 SP-ASCLIMTTEI 770
+P ASCL+MTTEI
Sbjct: 219 NPTASCLVMTTEI 231
>BC065258-1|AAH65258.1| 1043|Homo sapiens SKIV2L2 protein protein.
Length = 1043
Score = 163 bits (397), Expect = 5e-40
Identities = 82/133 (61%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Frame = +3
Query: 375 IVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVL 554
+ + ++ET EGCTHEVA+P ++Y PL P + K+Y FILD FQ+EAI C+DN QSVL
Sbjct: 100 VKVQSVETVEGCTHEVALPAEEDYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVL 159
Query: 555 VSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSXEFMMLV*XLVMYYQ 734
VSAHTSAGKTV AEYAIAL+L+ KQRVI+T+PIKALSNQKYRE EF +
Sbjct: 160 VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 219
Query: 735 SP-ASCLIMTTEI 770
+P ASCL+MTTEI
Sbjct: 220 NPTASCLVMTTEI 232
>BC028604-1|AAH28604.3| 1042|Homo sapiens superkiller viralicidic
activity 2-like 2 (S. cerevisiae) protein.
Length = 1042
Score = 163 bits (397), Expect = 5e-40
Identities = 82/133 (61%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Frame = +3
Query: 375 IVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVL 554
+ + ++ET EGCTHEVA+P ++Y PL P + K+Y FILD FQ+EAI C+DN QSVL
Sbjct: 99 VKVQSVETVEGCTHEVALPAEEDYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVL 158
Query: 555 VSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSXEFMMLV*XLVMYYQ 734
VSAHTSAGKTV AEYAIAL+L+ KQRVI+T+PIKALSNQKYRE EF +
Sbjct: 159 VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218
Query: 735 SP-ASCLIMTTEI 770
+P ASCL+MTTEI
Sbjct: 219 NPTASCLVMTTEI 231
>Z48796-1|CAA88733.1| 1246|Homo sapiens helicase protein.
Length = 1246
Score = 106 bits (254), Expect = 1e-22
Identities = 63/118 (53%), Positives = 81/118 (68%), Gaps = 2/118 (1%)
Frame = +3
Query: 423 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 602
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 289 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 345
Query: 603 IALSLKNKQRVIYTTPIKALSNQKYREFSXEF--MMLV*XLVMYYQSPASCLIMTTEI 770
IAL+ K+ R IYT+PIKALSNQK+R+F F + L+ V + ASCLIMTTEI
Sbjct: 346 IALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE-ASCLIMTTEI 402
>X98378-1|CAA67024.1| 1246|Homo sapiens SKI2W protein protein.
Length = 1246
Score = 106 bits (254), Expect = 1e-22
Identities = 63/118 (53%), Positives = 81/118 (68%), Gaps = 2/118 (1%)
Frame = +3
Query: 423 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 602
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 289 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 345
Query: 603 IALSLKNKQRVIYTTPIKALSNQKYREFSXEF--MMLV*XLVMYYQSPASCLIMTTEI 770
IAL+ K+ R IYT+PIKALSNQK+R+F F + L+ V + ASCLIMTTEI
Sbjct: 346 IALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE-ASCLIMTTEI 402
>CR753822-4|CAM26058.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 106 bits (254), Expect = 1e-22
Identities = 63/118 (53%), Positives = 81/118 (68%), Gaps = 2/118 (1%)
Frame = +3
Query: 423 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 602
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 289 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 345
Query: 603 IALSLKNKQRVIYTTPIKALSNQKYREFSXEF--MMLV*XLVMYYQSPASCLIMTTEI 770
IAL+ K+ R IYT+PIKALSNQK+R+F F + L+ V + ASCLIMTTEI
Sbjct: 346 IALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE-ASCLIMTTEI 402
>BX005143-14|CAM25870.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 106 bits (254), Expect = 1e-22
Identities = 63/118 (53%), Positives = 81/118 (68%), Gaps = 2/118 (1%)
Frame = +3
Query: 423 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 602
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 289 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 345
Query: 603 IALSLKNKQRVIYTTPIKALSNQKYREFSXEF--MMLV*XLVMYYQSPASCLIMTTEI 770
IAL+ K+ R IYT+PIKALSNQK+R+F F + L+ V + ASCLIMTTEI
Sbjct: 346 IALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE-ASCLIMTTEI 402
>BC015758-1|AAH15758.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 106 bits (254), Expect = 1e-22
Identities = 63/118 (53%), Positives = 81/118 (68%), Gaps = 2/118 (1%)
Frame = +3
Query: 423 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 602
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 289 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 345
Query: 603 IALSLKNKQRVIYTTPIKALSNQKYREFSXEF--MMLV*XLVMYYQSPASCLIMTTEI 770
IAL+ K+ R IYT+PIKALSNQK+R+F F + L+ V + ASCLIMTTEI
Sbjct: 346 IALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE-ASCLIMTTEI 402
>AL844853-15|CAI41863.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 106 bits (254), Expect = 1e-22
Identities = 63/118 (53%), Positives = 81/118 (68%), Gaps = 2/118 (1%)
Frame = +3
Query: 423 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 602
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 289 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 345
Query: 603 IALSLKNKQRVIYTTPIKALSNQKYREFSXEF--MMLV*XLVMYYQSPASCLIMTTEI 770
IAL+ K+ R IYT+PIKALSNQK+R+F F + L+ V + ASCLIMTTEI
Sbjct: 346 IALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE-ASCLIMTTEI 402
>AL662849-12|CAI17460.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 106 bits (254), Expect = 1e-22
Identities = 63/118 (53%), Positives = 81/118 (68%), Gaps = 2/118 (1%)
Frame = +3
Query: 423 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 602
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 289 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 345
Query: 603 IALSLKNKQRVIYTTPIKALSNQKYREFSXEF--MMLV*XLVMYYQSPASCLIMTTEI 770
IAL+ K+ R IYT+PIKALSNQK+R+F F + L+ V + ASCLIMTTEI
Sbjct: 346 IALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE-ASCLIMTTEI 402
>AL645922-13|CAI41730.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 106 bits (254), Expect = 1e-22
Identities = 63/118 (53%), Positives = 81/118 (68%), Gaps = 2/118 (1%)
Frame = +3
Query: 423 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 602
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 289 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 345
Query: 603 IALSLKNKQRVIYTTPIKALSNQKYREFSXEF--MMLV*XLVMYYQSPASCLIMTTEI 770
IAL+ K+ R IYT+PIKALSNQK+R+F F + L+ V + ASCLIMTTEI
Sbjct: 346 IALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE-ASCLIMTTEI 402
>AL049547-13|CAB89307.1| 1245|Homo sapiens dJ34F7.7 (superkiller
viralicidic activity 2 (S. cerevisiae homolog)-like
(SKI2 protein.
Length = 1245
Score = 106 bits (254), Expect = 1e-22
Identities = 63/118 (53%), Positives = 81/118 (68%), Gaps = 2/118 (1%)
Frame = +3
Query: 423 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 602
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 288 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 344
Query: 603 IALSLKNKQRVIYTTPIKALSNQKYREFSXEF--MMLV*XLVMYYQSPASCLIMTTEI 770
IAL+ K+ R IYT+PIKALSNQK+R+F F + L+ V + ASCLIMTTEI
Sbjct: 345 IALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE-ASCLIMTTEI 401
>AF059675-1|AAC78607.1| 1246|Homo sapiens putative RNA helicase
Ski2w protein.
Length = 1246
Score = 106 bits (254), Expect = 1e-22
Identities = 63/118 (53%), Positives = 81/118 (68%), Gaps = 2/118 (1%)
Frame = +3
Query: 423 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 602
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 289 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 345
Query: 603 IALSLKNKQRVIYTTPIKALSNQKYREFSXEF--MMLV*XLVMYYQSPASCLIMTTEI 770
IAL+ K+ R IYT+PIKALSNQK+R+F F + L+ V + ASCLIMTTEI
Sbjct: 346 IALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE-ASCLIMTTEI 402
>AF019413-6|AAB67978.1| 1246|Homo sapiens helicase protein.
Length = 1246
Score = 106 bits (254), Expect = 1e-22
Identities = 63/118 (53%), Positives = 81/118 (68%), Gaps = 2/118 (1%)
Frame = +3
Query: 423 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 602
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 289 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 345
Query: 603 IALSLKNKQRVIYTTPIKALSNQKYREFSXEF--MMLV*XLVMYYQSPASCLIMTTEI 770
IAL+ K+ R IYT+PIKALSNQK+R+F F + L+ V + ASCLIMTTEI
Sbjct: 346 IALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE-ASCLIMTTEI 402
>U09877-1|AAB52523.1| 1245|Homo sapiens helicase-like protein
protein.
Length = 1245
Score = 105 bits (251), Expect = 3e-22
Identities = 62/118 (52%), Positives = 81/118 (68%), Gaps = 2/118 (1%)
Frame = +3
Query: 423 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 602
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 288 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 344
Query: 603 IALSLKNKQRVIYTTPIKALSNQKYREFSXEF--MMLV*XLVMYYQSPASCLIMTTEI 770
IAL+ K+ R IYT+PIKAL+NQK+R+F F + L+ V + ASCLIMTTEI
Sbjct: 345 IALAQKHMTRTIYTSPIKALTNQKFRDFRNTFGDVGLLTGDVQLHPE-ASCLIMTTEI 401
>BC112891-1|AAI12892.1| 1887|Homo sapiens ASCC3L1 protein protein.
Length = 1887
Score = 45.2 bits (102), Expect = 3e-04
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Frame = +3
Query: 429 PPNQEYAPLLPLTTEPVKQYSF---------ILDPFQKEAILCIDNLQ-SVLVSAHTSAG 578
PP E L PL ++ +F +P Q + + N +V V A T +G
Sbjct: 1047 PPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSG 1106
Query: 579 KTVVAEYAIALSL--KNKQRVIYTTPIKALSNQKYREFSXEF 698
KT+ AE+AI L ++ R +Y TP++AL+ Q Y ++ +F
Sbjct: 1107 KTICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKF 1148
>BC065924-1|AAH65924.1| 1821|Homo sapiens ASCC3L1 protein protein.
Length = 1821
Score = 45.2 bits (102), Expect = 3e-04
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Frame = +3
Query: 429 PPNQEYAPLLPLTTEPVKQYSF---------ILDPFQKEAILCIDNLQ-SVLVSAHTSAG 578
PP E L PL ++ +F +P Q + + N +V V A T +G
Sbjct: 981 PPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSG 1040
Query: 579 KTVVAEYAIALSL--KNKQRVIYTTPIKALSNQKYREFSXEF 698
KT+ AE+AI L ++ R +Y TP++AL+ Q Y ++ +F
Sbjct: 1041 KTICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKF 1082
>BC007577-1|AAH07577.1| 1308|Homo sapiens ASCC3L1 protein protein.
Length = 1308
Score = 45.2 bits (102), Expect = 3e-04
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Frame = +3
Query: 429 PPNQEYAPLLPLTTEPVKQYSF---------ILDPFQKEAILCIDNLQ-SVLVSAHTSAG 578
PP E L PL ++ +F +P Q + + N +V V A T +G
Sbjct: 468 PPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSG 527
Query: 579 KTVVAEYAIALSL--KNKQRVIYTTPIKALSNQKYREFSXEF 698
KT+ AE+AI L ++ R +Y TP++AL+ Q Y ++ +F
Sbjct: 528 KTICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKF 569
>AY572488-1|AAS78571.1| 2136|Homo sapiens 200 kDa U5 snRNP-specific
spliceosomal protein protein.
Length = 2136
Score = 45.2 bits (102), Expect = 3e-04
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Frame = +3
Query: 429 PPNQEYAPLLPLTTEPVKQYSF---------ILDPFQKEAILCIDNLQ-SVLVSAHTSAG 578
PP E L PL ++ +F +P Q + + N +V V A T +G
Sbjct: 1296 PPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSG 1355
Query: 579 KTVVAEYAIALSL--KNKQRVIYTTPIKALSNQKYREFSXEF 698
KT+ AE+AI L ++ R +Y TP++AL+ Q Y ++ +F
Sbjct: 1356 KTICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKF 1397
>AK024391-1|BAB14906.1| 1811|Homo sapiens protein ( Homo sapiens cDNA
FLJ14329 fis, clone PLACE4000259, highly similar to
H.sapiens gene for U5 snRNP-specific 200kD protein. ).
Length = 1811
Score = 45.2 bits (102), Expect = 3e-04
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Frame = +3
Query: 429 PPNQEYAPLLPLTTEPVKQYSF---------ILDPFQKEAILCIDNLQ-SVLVSAHTSAG 578
PP E L PL ++ +F +P Q + + N +V V A T +G
Sbjct: 971 PPPTELLDLQPLPVSALRNSAFESLYRDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSG 1030
Query: 579 KTVVAEYAIALSL--KNKQRVIYTTPIKALSNQKYREFSXEF 698
KT+ AE+AI L ++ R +Y TP++AL+ Q Y ++ +F
Sbjct: 1031 KTICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKF 1072
>AB018331-1|BAA34508.2| 2026|Homo sapiens KIAA0788 protein protein.
Length = 2026
Score = 45.2 bits (102), Expect = 3e-04
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Frame = +3
Query: 429 PPNQEYAPLLPLTTEPVKQYSF---------ILDPFQKEAILCIDNLQ-SVLVSAHTSAG 578
PP E L PL ++ +F +P Q + + N +V V A T +G
Sbjct: 1186 PPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSG 1245
Query: 579 KTVVAEYAIALSL--KNKQRVIYTTPIKALSNQKYREFSXEF 698
KT+ AE+AI L ++ R +Y TP++AL+ Q Y ++ +F
Sbjct: 1246 KTICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKF 1287
>BC038115-1|AAH38115.1| 1712|Homo sapiens hypothetical protein
FLJ20035 protein.
Length = 1712
Score = 44.4 bits (100), Expect = 5e-04
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = +3
Query: 492 FILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQR--VIYTTPIKALS 665
FI D +Q+E + +D +S ++ A TS+GKT + Y + LK V+Y P KAL
Sbjct: 762 FIPDTWQRELLDVVDKNESAVIVAPTSSGKTYASYYCMEKVLKESDDGVVVYVAPTKALV 821
Query: 666 NQ 671
NQ
Sbjct: 822 NQ 823
>BC007820-1|AAH07820.1| 299|Homo sapiens FLJ20035 protein protein.
Length = 299
Score = 44.4 bits (100), Expect = 5e-04
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = +3
Query: 492 FILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQR--VIYTTPIKALS 665
FI D +Q+E + +D +S ++ A TS+GKT + Y + LK V+Y P KAL
Sbjct: 35 FIPDTWQRELLDVVDKNESAVIVAPTSSGKTYASYYCMEKVLKESDDGVVVYVAPTKALV 94
Query: 666 NQ 671
NQ
Sbjct: 95 NQ 96
>AK001649-1|BAA91809.1| 1174|Homo sapiens protein ( Homo sapiens
cDNA FLJ10787 fis, clone NT2RP4000481, weakly similar to
ATP-DEPENDENT RNA HELICASE DOB1. ).
Length = 1174
Score = 44.4 bits (100), Expect = 5e-04
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = +3
Query: 492 FILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQR--VIYTTPIKALS 665
FI D +Q+E + +D +S ++ A TS+GKT + Y + LK V+Y P KAL
Sbjct: 762 FIPDTWQRELLDVVDKNESAVIVAPTSSGKTYASYYCMEKVLKESDDGVVVYVAPTKALV 821
Query: 666 NQ 671
NQ
Sbjct: 822 NQ 823
>Z70200-1|CAA94089.1| 1701|Homo sapiens U5 snRNP-specific 200kD
protein protein.
Length = 1701
Score = 41.9 bits (94), Expect = 0.003
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Frame = +3
Query: 429 PPNQEYAPLLPLTTEPVKQYSF---------ILDPFQKEAILCIDNLQ-SVLVSAHTSAG 578
PP E L PL ++ +F +P Q + + N +V V A T +G
Sbjct: 861 PPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSG 920
Query: 579 KTVVAEYAI-ALSLKNKQ-RVIYTTPIKALSNQKYREFSXEF 698
KT+ AE+AI + L+N + R +Y TP++ Q Y ++ +F
Sbjct: 921 KTICAEFAILRMLLQNSEGRCVYITPMRLWQEQVYMDWYEKF 962
>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
Length = 26926
Score = 35.1 bits (77), Expect = 0.31
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +3
Query: 360 CSNLVIVIHTLETHEGCTHEVAIPPNQEYAPLLPL-TTEPVKQYSFILDPFQKEAILCID 536
C+ I L+ EGC++ + + EY LP TTEPVK L P + +
Sbjct: 18755 CTKTTFRIENLQ--EGCSYYFRVLASNEYGIGLPAETTEPVKVSEPPLPPGRVTLVDVTR 18812
Query: 537 NLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKAL 662
N ++ S G + + Y + + K ++ T +K L
Sbjct: 18813 NTATIKWEKPESDGGSKITGYVVEMQTKGSEKWSTCTQVKTL 18854
>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
Length = 30000
Score = 35.1 bits (77), Expect = 0.31
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +3
Query: 360 CSNLVIVIHTLETHEGCTHEVAIPPNQEYAPLLPL-TTEPVKQYSFILDPFQKEAILCID 536
C+ I L+ EGC++ + + EY LP TTEPVK L P + +
Sbjct: 26179 CTKTTFRIENLQ--EGCSYYFRVLASNEYGIGLPAETTEPVKVSEPPLPPGRVTLVDVTR 26236
Query: 537 NLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKAL 662
N ++ S G + + Y + + K ++ T +K L
Sbjct: 26237 NTATIKWEKPESDGGSKITGYVVEMQTKGSEKWSTCTQVKTL 26278
>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
Length = 26926
Score = 35.1 bits (77), Expect = 0.31
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +3
Query: 360 CSNLVIVIHTLETHEGCTHEVAIPPNQEYAPLLPL-TTEPVKQYSFILDPFQKEAILCID 536
C+ I L+ EGC++ + + EY LP TTEPVK L P + +
Sbjct: 18755 CTKTTFRIENLQ--EGCSYYFRVLASNEYGIGLPAETTEPVKVSEPPLPPGRVTLVDVTR 18812
Query: 537 NLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKAL 662
N ++ S G + + Y + + K ++ T +K L
Sbjct: 18813 NTATIKWEKPESDGGSKITGYVVEMQTKGSEKWSTCTQVKTL 18854
>BX323048-2|CAO03501.1| 1435|Homo sapiens HFM1, ATP-dependent DNA
helicase homolog (S. cerevisiae) protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.41
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Frame = +3
Query: 543 QSVLVSAHTSAGKTVVAEYAIALSLKNKQ------RVIYTTPIKALSNQKYREFSXEF 698
++ ++ A T +GKTVV E AI L +++Y PIKAL +Q++ ++ +F
Sbjct: 297 RNFVICAPTGSGKTVVFELAITRLLMEVPLPWLNIKIVYMAPIKALCSQRFDDWKEKF 354
>BC132823-1|AAI32824.1| 471|Homo sapiens HFM1 protein protein.
Length = 471
Score = 34.7 bits (76), Expect = 0.41
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Frame = +3
Query: 543 QSVLVSAHTSAGKTVVAEYAIALSLKNKQ------RVIYTTPIKALSNQKYREFSXEF 698
++ ++ A T +GKTVV E AI L +++Y PIKAL +Q++ ++ +F
Sbjct: 297 RNFVICAPTGSGKTVVFELAITRLLMEVPLPWLNIKIVYMAPIKALCSQRFDDWKEKF 354
>AB204867-1|BAF45466.1| 1435|Homo sapiens helicase-like protein HFM1
protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.41
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Frame = +3
Query: 543 QSVLVSAHTSAGKTVVAEYAIALSLKNKQ------RVIYTTPIKALSNQKYREFSXEF 698
++ ++ A T +GKTVV E AI L +++Y PIKAL +Q++ ++ +F
Sbjct: 297 RNFVICAPTGSGKTVVFELAITRLLMEVPLPWLNIKIVYMAPIKALCSQRFDDWKEKF 354
>BC041785-1|AAH41785.1| 599|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 52 protein.
Length = 599
Score = 33.1 bits (72), Expect = 1.3
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = +3
Query: 504 PFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLK---NKQ-RVIYTTPIKALSNQ 671
P Q +AI + + + +L SA T +GKT+ I + LK NK R + +P + L++Q
Sbjct: 190 PIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQ 249
Query: 672 KYRE 683
+RE
Sbjct: 250 IHRE 253
>AK093661-1|BAC04214.1| 360|Homo sapiens protein ( Homo sapiens
cDNA FLJ36342 fis, clone THYMU2006666, highly similar to
Homo sapiens putative ATP-dependent RNA helicase ROK1
mRNA. ).
Length = 360
Score = 33.1 bits (72), Expect = 1.3
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = +3
Query: 504 PFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLK---NKQ-RVIYTTPIKALSNQ 671
P Q +AI + + + +L SA T +GKT+ I + LK NK R + +P + L++Q
Sbjct: 82 PIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQ 141
Query: 672 KYRE 683
+RE
Sbjct: 142 IHRE 145
>AK001652-1|BAA91812.1| 491|Homo sapiens protein ( Homo sapiens
cDNA FLJ10790 fis, clone NT2RP4000518, weakly similar to
ATP-DEPENDENT RNA HELICASE ROK1. ).
Length = 491
Score = 33.1 bits (72), Expect = 1.3
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = +3
Query: 504 PFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLK---NKQ-RVIYTTPIKALSNQ 671
P Q +AI + + + +L SA T +GKT+ I + LK NK R + +P + L++Q
Sbjct: 82 PIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQ 141
Query: 672 KYRE 683
+RE
Sbjct: 142 IHRE 145
>AJ010840-1|CAA09374.1| 420|Homo sapiens ATP-dependent RNA helicase
protein.
Length = 420
Score = 33.1 bits (72), Expect = 1.3
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = +3
Query: 504 PFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLK---NKQ-RVIYTTPIKALSNQ 671
P Q +AI + + + +L SA T +GKT+ I + LK NK R + +P + L++Q
Sbjct: 11 PIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQ 70
Query: 672 KYRE 683
+RE
Sbjct: 71 IHRE 74
>AB208938-1|BAD92175.1| 512|Homo sapiens ATP-dependent RNA helicase
ROK1 isoform a variant protein.
Length = 512
Score = 33.1 bits (72), Expect = 1.3
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = +3
Query: 504 PFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLK---NKQ-RVIYTTPIKALSNQ 671
P Q +AI + + + +L SA T +GKT+ I + LK NK R + +P + L++Q
Sbjct: 189 PIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQ 248
Query: 672 KYRE 683
+RE
Sbjct: 249 IHRE 252
>AY338826-1|AAR08421.2| 2590|Homo sapiens DNA polymerase theta
protein.
Length = 2590
Score = 30.3 bits (65), Expect = 8.9
Identities = 15/45 (33%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +3
Query: 543 QSVLVSAHTSAGKTVVAEYAIALS-LKNKQRVIYTTPIKALSNQK 674
++++ SA TSAGKT+VAE I L+ +++ ++ P +++ +K
Sbjct: 109 KNLVYSAPTSAGKTLVAELLILKRVLEMRKKALFILPFVSVAKEK 153
>AY032677-1|AAK39635.1| 2724|Homo sapiens DNA polymerase theta
protein.
Length = 2724
Score = 30.3 bits (65), Expect = 8.9
Identities = 15/45 (33%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +3
Query: 543 QSVLVSAHTSAGKTVVAEYAIALS-LKNKQRVIYTTPIKALSNQK 674
++++ SA TSAGKT+VAE I L+ +++ ++ P +++ +K
Sbjct: 242 KNLVYSAPTSAGKTLVAELLILKRVLEMRKKALFILPFVSVAKEK 286
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,864,848
Number of Sequences: 237096
Number of extensions: 2077084
Number of successful extensions: 4229
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 4046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4206
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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