Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_P07
(827 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical pr... 165 3e-41
Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical pr... 109 3e-24
U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical p... 45 8e-05
AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical ... 40 0.002
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 36 0.027
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 36 0.047
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 36 0.047
AL132862-19|CAB70231.2| 640|Caenorhabditis elegans Hypothetical... 34 0.11
U61953-2|AAC48081.1| 356|Caenorhabditis elegans Seven tm recept... 29 4.1
Z77655-6|CAB01139.1| 351|Caenorhabditis elegans Hypothetical pr... 28 9.4
U75587-1|AAB48299.1| 351|Caenorhabditis elegans caveolin-2 prot... 28 9.4
>Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical
protein W08D2.7 protein.
Length = 1026
Score = 165 bits (401), Expect = 3e-41
Identities = 89/135 (65%), Positives = 101/135 (74%), Gaps = 3/135 (2%)
Frame = +3
Query: 375 IVIHTLET-HEGCTHEVAIPPNQEYAPLLPLT-TEPVKQYSFILDPFQKEAILCIDNLQS 548
I++HT+ T +E CTHEVAIPPN E+A L + TEP K Y F LD FQK+AILCIDN QS
Sbjct: 83 IIVHTIRTDNENCTHEVAIPPNAEFAELRENSGTEPAKYYPFQLDAFQKQAILCIDNNQS 142
Query: 549 VLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSXEFMMLV*XLVMY 728
VLVSAHTSAGKTVVA YAIA L+ KQRVIYT+PIKALSNQKYRE EF +
Sbjct: 143 VLVSAHTSAGKTVVATYAIAKCLREKQRVIYTSPIKALSNQKYRELEEEFKDVGLMTGDV 202
Query: 729 YQSP-ASCLIMTTEI 770
+P ASCL+MTTEI
Sbjct: 203 TLNPDASCLVMTTEI 217
>Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical
protein F01G4.3 protein.
Length = 1266
Score = 109 bits (261), Expect = 3e-24
Identities = 59/112 (52%), Positives = 79/112 (70%), Gaps = 2/112 (1%)
Frame = +3
Query: 441 EYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLK 620
EY L+P ++Y F LDPFQ+ ++LC++ +S+ V+AHTSAGKTVVAEYAIAL
Sbjct: 277 EYKRLVPTMA---RKYPFSLDPFQQSSVLCMERGESLFVAAHTSAGKTVVAEYAIALCQA 333
Query: 621 NKQRVIYTTPIKALSNQKYREFSXEF--MMLV*XLVMYYQSPASCLIMTTEI 770
+K R +YT+PIKALSNQK+R+F F + LV + + A+CLIMTTEI
Sbjct: 334 HKTRAVYTSPIKALSNQKFRDFKQIFGDVGLVTGDIQLHPE-AACLIMTTEI 384
>U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical
protein C28H8.3 protein.
Length = 1714
Score = 44.8 bits (101), Expect = 8e-05
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = +3
Query: 453 LLPLTTEPVKQ---YSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKN 623
L+ + ++P K F D +Q++ + +D S L+ A TSAGKT V+ Y I L++
Sbjct: 767 LIDIQSDPKKDDRVSGFAPDGWQRKMLDSVDRGNSALIIAPTSAGKTFVSYYCIEKVLRS 826
Query: 624 KQR--VIYTTPIKALSNQ 671
V+Y P KAL NQ
Sbjct: 827 SDNDVVVYVAPSKALINQ 844
>AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical
protein Y54E2A.6 protein.
Length = 1798
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Frame = +3
Query: 486 YSF-ILDPFQKEAILCIDNL-QSVLVSAHTSAGKTVVAEYAIALSLKNK--QRVIYTTPI 653
Y+F +P Q + C+ +S L+ A T +GKT+ AE A+ L++ +V+Y P+
Sbjct: 956 YNFDYFNPIQAQVFFCLYKTDKSALIGAPTGSGKTLCAELAMFRLLQDHPGMKVVYIAPL 1015
Query: 654 KALSNQKYREFSXEF 698
K+L ++ ++ +F
Sbjct: 1016 KSLVRERVDDWKKKF 1030
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 36.3 bits (80), Expect = 0.027
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Frame = +3
Query: 429 PPNQEYAPLLPLTTEPVKQYSF----------ILDPFQKEAILCI-DNLQSVLVSAHTSA 575
PP E L PL V F + +P Q + + ++ ++V+V A +
Sbjct: 1289 PPPTELLDLQPLPISAVTNKEFQTVFAESGFKVFNPIQTQVFRTVFESNENVIVCAPNGS 1348
Query: 576 GKTVVAEYAIALSLKN--KQRVIYTTPIKALSNQKYREF 686
GKT +AE A+ +N + + +Y TP++ ++ + Y ++
Sbjct: 1349 GKTAIAELAVLRHFENTPEAKAVYITPMEDMATKVYADW 1387
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 35.5 bits (78), Expect = 0.047
Identities = 26/84 (30%), Positives = 43/84 (51%)
Frame = +3
Query: 504 PFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYRE 683
P Q++ I CI + + V+ + T +GKT A + I + K K+R TT I+AL RE
Sbjct: 49 PIQRKTIPCIMDGKDVVAMSRTGSGKT--AAFVIPMLQKLKRR--DTTGIRALMVSPTRE 104
Query: 684 FSXEFMMLV*XLVMYYQSPASCLI 755
+ + +V L + +CL+
Sbjct: 105 LALQTFKVVKELGRFTGLRCACLV 128
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 35.5 bits (78), Expect = 0.047
Identities = 26/84 (30%), Positives = 43/84 (51%)
Frame = +3
Query: 504 PFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYRE 683
P Q++ I CI + + V+ + T +GKT A + I + K K+R TT I+AL RE
Sbjct: 49 PIQRKTIPCIMDGKDVVAMSRTGSGKT--AAFVIPMLQKLKRR--DTTGIRALMVSPTRE 104
Query: 684 FSXEFMMLV*XLVMYYQSPASCLI 755
+ + +V L + +CL+
Sbjct: 105 LALQTFKVVKELGRFTGLRCACLV 128
>AL132862-19|CAB70231.2| 640|Caenorhabditis elegans Hypothetical
protein Y73F8A.25a protein.
Length = 640
Score = 34.3 bits (75), Expect = 0.11
Identities = 24/69 (34%), Positives = 32/69 (46%)
Frame = +2
Query: 149 LFDCFDETPITEAAIQLPNVKNVEKPNLEELTAAGNKRAHDDIQYADTSVSKKPREEEED 328
L FDE T A Q + + P LEEL NK+ D Q + +S S P E D
Sbjct: 295 LMQAFDELEPTIAEYQSDLIAGMTAPELEEL----NKQIDCDDQMSQSSDSAPPSEVSSD 350
Query: 329 SELITDINV 355
EL T +++
Sbjct: 351 LELDTALDI 359
>U61953-2|AAC48081.1| 356|Caenorhabditis elegans Seven tm receptor
protein 185 protein.
Length = 356
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = -2
Query: 286 SVLDVIMCTLISSSSQLFQVWFFNIFNIWQLNRSFSYWCFIKTVKQTIYVRHFKQVTLQI 107
+V I C S +F V+FF I +++ + S C + +V + + + F+ + +Q
Sbjct: 203 AVFASIACMWFMILSSVFSVFFFGIKCYFRITEALSRTCNVSSVTKGLQQQLFQALVVQT 262
Query: 106 F 104
F
Sbjct: 263 F 263
>Z77655-6|CAB01139.1| 351|Caenorhabditis elegans Hypothetical
protein C56A3.7 protein.
Length = 351
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 375 IVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQ 485
+ + + + +G T VA P ++YAP +PL P +Q
Sbjct: 136 VTVIEIASQKGSTKRVA--PRKDYAPSIPLPEHPAQQ 170
>U75587-1|AAB48299.1| 351|Caenorhabditis elegans caveolin-2
protein.
Length = 351
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 375 IVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQ 485
+ + + + +G T VA P ++YAP +PL P +Q
Sbjct: 136 VTVIEIASQKGSTKRVA--PRKDYAPSIPLPEHPAQQ 170
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,707,901
Number of Sequences: 27780
Number of extensions: 342995
Number of successful extensions: 1010
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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