Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_P06
(896 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 88 7e-18
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 58 6e-09
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 55 8e-08
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 51 1e-06
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 45 6e-05
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 45 6e-05
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 42 5e-04
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 42 8e-04
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 42 8e-04
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 41 0.001
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 39 0.004
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 36 0.052
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 34 0.12
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 34 0.16
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 34 0.16
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 34 0.16
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 33 0.28
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 32 0.64
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 32 0.64
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 30 2.0
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 29 4.5
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 28 7.9
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 88.2 bits (209), Expect = 7e-18
Identities = 51/116 (43%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Frame = +3
Query: 420 SNTVPTSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKG 599
S +S ALRAL +E K+LQ +PVEGF + + EDNLF W V I+GPP TLYQGGYFK
Sbjct: 3 SKASTSSGALRALTMELKNLQSQPVEGFTIDV-NEDNLFVWTVGIYGPPKTLYQGGYFKA 61
Query: 600 THEIPP*TTRIHHHP--LGF*LKSGIQMYMKTEIFAYRFSTRPWXDPQSGELPCER 761
+ P + + P + F K + P DPQSGEL CER
Sbjct: 62 SIRFP---SNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACER 114
Score = 58.4 bits (135), Expect = 6e-09
Identities = 25/43 (58%), Positives = 28/43 (65%)
Frame = +2
Query: 644 IRFLTKVWHPNVYENGDLCISILHPPVX*SSVWRTALRTXXPT 772
++F TKVWHPNVYENGDLCISILH P+ A PT
Sbjct: 76 MKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPT 118
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 58.4 bits (135), Expect = 6e-09
Identities = 21/53 (39%), Positives = 36/53 (67%)
Frame = +3
Query: 456 LALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 614
L + ++ PV+GF L+ ++++++WEV + GPPDTLY+GG+FK + P
Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFP 60
Score = 42.7 bits (96), Expect = 3e-04
Identities = 13/26 (50%), Positives = 23/26 (88%)
Frame = +2
Query: 644 IRFLTKVWHPNVYENGDLCISILHPP 721
++F++++WHPN+ + G++CISILH P
Sbjct: 70 MKFISEIWHPNIDKEGNVCISILHDP 95
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 54.8 bits (126), Expect = 8e-08
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +3
Query: 435 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKG 599
+SSA+R L +Y L ++PV+G + L EDN+ EW + G PDT + GGY+ G
Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKA-LPNEDNILEWHYCLRGSPDTPFYGGYYWG 70
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/57 (42%), Positives = 28/57 (49%)
Frame = +3
Query: 444 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 614
AL+ L EYK L P EG + EDN FEWE I GP +T + G F P
Sbjct: 5 ALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFP 61
Score = 39.1 bits (87), Expect = 0.004
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +2
Query: 644 IRFLTKVWHPNVYENGDLCISILHPP 721
+RF ++HPN+Y +G +CISILH P
Sbjct: 71 MRFTCGIFHPNIYADGRVCISILHAP 96
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 45.2 bits (102), Expect = 6e-05
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +3
Query: 435 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFK 596
T+ + R L ++K LQE+P G EDN+ WE IFGP +T ++ G FK
Sbjct: 2 TTPSRRRLMRDFKKLQEDPPAGVSGAPT-EDNILTWEAIIFGPQETPFEDGTFK 54
Score = 36.3 bits (80), Expect = 0.030
Identities = 11/23 (47%), Positives = 20/23 (86%)
Frame = +2
Query: 644 IRFLTKVWHPNVYENGDLCISIL 712
++F++K++HPNVY +G +C+ IL
Sbjct: 70 VKFISKMFHPNVYADGSICLDIL 92
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 45.2 bits (102), Expect = 6e-05
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +3
Query: 435 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFK 596
T+ + R L ++K LQE+P G EDN+ WE IFGP +T ++ G FK
Sbjct: 2 TTPSRRRLMRDFKKLQEDPPAGVSGAPT-EDNILTWEAIIFGPQETPFEDGTFK 54
Score = 36.3 bits (80), Expect = 0.030
Identities = 11/23 (47%), Positives = 20/23 (86%)
Frame = +2
Query: 644 IRFLTKVWHPNVYENGDLCISIL 712
++F++K++HPNVY +G +C+ IL
Sbjct: 70 VKFISKMFHPNVYADGSICLDIL 92
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 42.3 bits (95), Expect = 5e-04
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +3
Query: 444 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKG 599
AL+ L +Y+ L +EPV + L E N+ EW I G P T Y+GG + G
Sbjct: 9 ALQRLKKDYQRLLKEPVPFMKAAPL-ETNILEWRYIIIGAPKTPYEGGIYMG 59
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +3
Query: 444 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 614
AL+ + E + L +P +G+D LF W+ I GPP++ YQGG F T P
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDD-LFHWQATIMGPPESPYQGGVFFLTIHFP 57
Score = 33.9 bits (74), Expect = 0.16
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 644 IRFLTKVWHPNVYENGDLCISIL 712
+ F T+++HPN+ NG +C+ IL
Sbjct: 67 VAFTTRIYHPNINSNGSICLDIL 89
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +3
Query: 444 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 614
AL+ + E + L +P +G+D LF W+ I GPP++ YQGG F T P
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDD-LFHWQATIMGPPESPYQGGVFFLTIHFP 57
Score = 33.9 bits (74), Expect = 0.16
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 644 IRFLTKVWHPNVYENGDLCISIL 712
+ F T+++HPN+ NG +C+ IL
Sbjct: 67 VAFTTRIYHPNINSNGSICLDIL 89
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 41.1 bits (92), Expect = 0.001
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 644 IRFLTKVWHPNVYENGDLCISILHPPVX*SSVWR 745
++ LTKVWHPN+ E+G +C+SIL WR
Sbjct: 94 VKCLTKVWHPNINEDGSICLSILRQNSLDQYGWR 127
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 444 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYF 593
AL+ + E L +P +G+D L+ W+ I GPP++ YQGG F
Sbjct: 2 ALKRIQKELHDLGRDPPAQCSTGSVGDD-LYHWQATIMGPPESPYQGGIF 50
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 35.5 bits (78), Expect = 0.052
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 417 MSNTVPTSSA-LRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYF 593
MS T +A +R L E L++ P E + + + EDNLFEW I G T ++GG +
Sbjct: 1 MSEQYNTKNAGVRRLMKEAMELRQ-PTEMYHAQPM-EDNLFEWHFTIRGTLGTDFEGGIY 58
Query: 594 KG 599
G
Sbjct: 59 HG 60
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 34.3 bits (75), Expect = 0.12
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +2
Query: 644 IRFLTKVWHPNVYENGDLCISIL 712
+RF+TK++HPN+ + G +C+ IL
Sbjct: 70 VRFMTKIYHPNIDKLGRICLDIL 92
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +3
Query: 456 LALEYKSLQEEPVEGFRVKLL----GEDNLFEWEVAIFGPPDTLYQGGYFK 596
LA E K +++ GF K + G NLF WE AI G DT+++GG ++
Sbjct: 9 LAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYR 59
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 647 RFLTKVWHPNVYENGDLCISIL 712
+F ++HPNVY +G +C+S+L
Sbjct: 76 KFEPPLFHPNVYPSGTVCLSLL 97
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +3
Query: 456 LALEYKSLQEEPVEGFRVKLL----GEDNLFEWEVAIFGPPDTLYQGGYFK 596
LA E K +++ GF K + G NLF WE AI G DT+++GG ++
Sbjct: 9 LAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYR 59
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 647 RFLTKVWHPNVYENGDLCISIL 712
+F ++HPNVY +G +C+S+L
Sbjct: 76 KFEPPLFHPNVYPSGTVCLSLL 97
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 644 IRFLTKVWHPNV-YENGDLCISILHPPVX*SSVWRTAL 754
++F TK+WHPNV + G +C+ IL S RT L
Sbjct: 73 VKFSTKIWHPNVSSQTGVICLDILKDQWAASLTLRTVL 110
Score = 32.3 bits (70), Expect = 0.48
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 498 GFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 614
G +++L E NL E + I GPPDT Y GG F +IP
Sbjct: 26 GIMIEILNE-NLTEIKGHIRGPPDTPYAGGMFDLDIKIP 63
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 33.1 bits (72), Expect = 0.28
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 647 RFLTKVWHPNV-YENGDLCISILHPPVX*SSVWRTAL 754
+F+T++WHPN+ + G +C+ IL S RT L
Sbjct: 103 KFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVL 139
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 31.9 bits (69), Expect = 0.64
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 644 IRFLTKVWHPNVYENGDLCISILHPPVX*SSVWRTALRT 760
+ F TK++HPNV E G C+ P+ + W+ A +T
Sbjct: 68 VAFETKIYHPNVDEEGKFCL-----PIVTAENWKPATKT 101
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 31.9 bits (69), Expect = 0.64
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 435 TSSALRALALEYKSLQEEPVEGFRVKLLGEDN-LFEWEVAIFGPPDTLYQGGYF 593
+ +A R L E L+ E EG V N L +W++ + G TLY G F
Sbjct: 2 SDAATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVF 55
Score = 29.1 bits (62), Expect = 4.5
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 668 HPNVYENGDLCISIL 712
HP++Y NG +C+SIL
Sbjct: 82 HPHIYSNGHICLSIL 96
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -2
Query: 553 IATSHSNRLSSPSNLTRKPSTGSSCRLLYSNAKALRAELV 434
+ +SN + SP+N +TG+SC +L+S+ K A V
Sbjct: 12 VGQPYSNLVISPNNRILATTTGASCEVLFSDKKGNDARRV 51
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 29.1 bits (62), Expect = 4.5
Identities = 9/21 (42%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +2
Query: 644 IRFLTKVWHPNVYE-NGDLCI 703
++F+TK+WHP+V +G +C+
Sbjct: 415 VKFITKIWHPSVSPFDGTICL 435
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/25 (40%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +2
Query: 644 IRFLTKVWHPNVYE-NGDLCISILH 715
I FL K++HPN+ E +G +C+ +++
Sbjct: 69 IGFLNKIFHPNIDEASGTVCLDVIN 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,787,733
Number of Sequences: 27780
Number of extensions: 424580
Number of successful extensions: 956
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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