Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_P04
(903 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 100 5e-23
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 100 5e-23
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 100 5e-23
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 100 5e-23
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 50 7e-08
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 24 0.57
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 23 9.6
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 100 bits (240), Expect = 5e-23
Identities = 52/157 (33%), Positives = 78/157 (49%)
Frame = +3
Query: 423 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 602
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 603 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERQPTPT 782
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L +
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 783 *IVXXXXXXXXXXXXXXXTAL*NVDLTEFXTNLVPYP 893
N DL + N+VP+P
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFP 157
Score = 31.5 bits (68), Expect = 0.036
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 767 PTYTNLNRLIGQXVSSITASLRFDGALKCGPHRVPX*LGALPRI 898
P+Y +LN L+ +S +T LRF G L ++ + PR+
Sbjct: 116 PSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRL 159
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 100 bits (240), Expect = 5e-23
Identities = 52/157 (33%), Positives = 78/157 (49%)
Frame = +3
Query: 423 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 602
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 603 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERQPTPT 782
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L +
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 783 *IVXXXXXXXXXXXXXXXTAL*NVDLTEFXTNLVPYP 893
N DL + N+VP+P
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFP 157
Score = 31.5 bits (68), Expect = 0.036
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 767 PTYTNLNRLIGQXVSSITASLRFDGALKCGPHRVPX*LGALPRI 898
P+Y +LN L+ +S +T LRF G L ++ + PR+
Sbjct: 116 PSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRL 159
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 100 bits (240), Expect = 5e-23
Identities = 52/157 (33%), Positives = 78/157 (49%)
Frame = +3
Query: 423 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 602
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 603 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERQPTPT 782
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L +
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 783 *IVXXXXXXXXXXXXXXXTAL*NVDLTEFXTNLVPYP 893
N DL + N+VP+P
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFP 157
Score = 31.5 bits (68), Expect = 0.036
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 767 PTYTNLNRLIGQXVSSITASLRFDGALKCGPHRVPX*LGALPRI 898
P+Y +LN L+ +S +T LRF G L ++ + PR+
Sbjct: 116 PSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRL 159
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 100 bits (240), Expect = 5e-23
Identities = 52/157 (33%), Positives = 78/157 (49%)
Frame = +3
Query: 423 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 602
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 603 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERQPTPT 782
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L +
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 783 *IVXXXXXXXXXXXXXXXTAL*NVDLTEFXTNLVPYP 893
N DL + N+VP+P
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFP 157
Score = 31.5 bits (68), Expect = 0.036
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 767 PTYTNLNRLIGQXVSSITASLRFDGALKCGPHRVPX*LGALPRI 898
P+Y +LN L+ +S +T LRF G L ++ + PR+
Sbjct: 116 PSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRL 159
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 50.4 bits (115), Expect = 7e-08
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +3
Query: 105 MRECISVHVGQAGVQIGNACWE 170
MRECISVHVGQAGVQIGN CW+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
Score = 41.1 bits (92), Expect = 4e-05
Identities = 26/68 (38%), Positives = 28/68 (41%)
Frame = +1
Query: 160 PAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVXXXXXXXXXXXXXX 339
P T WS AS+ RCP+TR S ST SS R AST PV
Sbjct: 19 PCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRC 78
Query: 340 XXAHTDSC 363
A T SC
Sbjct: 79 APARTASC 86
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.8 bits (49), Expect(2) = 0.57
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 211 CPQTRPSGVETILSTLSSARPELAS 285
C RPS ++ ++ S RP+LA+
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAA 188
Score = 21.8 bits (44), Expect(2) = 0.57
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 154 VMPAGSFTAWSTASSLMARCPQTRPSGV 237
V+ AG F AW TA +T+P G+
Sbjct: 116 VLLAGDFNAWHTAWG----SERTKPKGI 139
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
TPR-containing phosphoprotein protein.
Length = 1200
Score = 23.4 bits (48), Expect = 9.6
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 721 MKPSMTSAAV-ISTLSANLHQPESSHRTDXLLDHCF 825
++P A V ++ L NLH+PES+ +L +
Sbjct: 226 LEPQCVGALVGLAILKLNLHEPESNRMGVQMLSKAY 261
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 955,400
Number of Sequences: 2352
Number of extensions: 20379
Number of successful extensions: 67
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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