Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_P03
(844 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 348 3e-96
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 348 3e-96
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 348 3e-96
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 346 1e-95
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 320 1e-87
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 320 1e-87
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 318 2e-87
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 318 2e-87
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 316 1e-86
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 314 7e-86
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 314 7e-86
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 312 2e-85
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 295 3e-80
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 293 8e-80
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 274 4e-74
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 250 1e-66
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 167 1e-41
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 165 3e-41
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 164 6e-41
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 163 2e-40
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 163 2e-40
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 162 3e-40
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 144 5e-35
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 144 5e-35
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 91 7e-19
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 91 7e-19
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.59
AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical ... 29 3.1
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 4.1
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 4.1
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 4.1
AL110485-19|CAB60367.2| 529|Caenorhabditis elegans Hypothetical... 28 7.2
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 28 9.5
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 9.5
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 9.5
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 9.5
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 9.5
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 9.5
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 9.5
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 9.5
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 9.5
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 348 bits (856), Expect = 3e-96
Identities = 168/242 (69%), Positives = 186/242 (76%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 283
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 643
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 644 VVEPYNSIXXXXXXXXXXXXCFHGRQ*SXL*HLPPXXSTLSAQPTPT*NRLIGQIVSSXP 823
VVEPYNSI F + + + NRLIGQIVSS
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDN-EAIYDICRRNLDIERPSYTNLNRLIGQIVSSIT 239
Query: 824 AS 829
AS
Sbjct: 240 AS 241
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3
Query: 690 KHSDCAFMVDNEAXYDICRR 749
+HSDC+FMVDNEA YDICRR
Sbjct: 196 EHSDCSFMVDNEAIYDICRR 215
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 348 bits (856), Expect = 3e-96
Identities = 168/242 (69%), Positives = 186/242 (76%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 283
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 643
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 644 VVEPYNSIXXXXXXXXXXXXCFHGRQ*SXL*HLPPXXSTLSAQPTPT*NRLIGQIVSSXP 823
VVEPYNSI F + + + NRLIGQIVSS
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDN-EAIYDICRRNLDIERPSYTNLNRLIGQIVSSIT 239
Query: 824 AS 829
AS
Sbjct: 240 AS 241
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3
Query: 690 KHSDCAFMVDNEAXYDICRR 749
+HSDC+FMVDNEA YDICRR
Sbjct: 196 EHSDCSFMVDNEAIYDICRR 215
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 348 bits (856), Expect = 3e-96
Identities = 168/242 (69%), Positives = 186/242 (76%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 283
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 643
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 644 VVEPYNSIXXXXXXXXXXXXCFHGRQ*SXL*HLPPXXSTLSAQPTPT*NRLIGQIVSSXP 823
VVEPYNSI F + + + NRLIGQIVSS
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDN-EAIYDICRRNLDIERPSYTNLNRLIGQIVSSIT 239
Query: 824 AS 829
AS
Sbjct: 240 AS 241
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3
Query: 690 KHSDCAFMVDNEAXYDICRR 749
+HSDC+FMVDNEA YDICRR
Sbjct: 196 EHSDCSFMVDNEAIYDICRR 215
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 346 bits (851), Expect = 1e-95
Identities = 167/241 (69%), Positives = 185/241 (76%)
Frame = +2
Query: 107 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 286
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 287 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 467 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 646
IR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTAV
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAV 180
Query: 647 VEPYNSIXXXXXXXXXXXXCFHGRQ*SXL*HLPPXXSTLSAQPTPT*NRLIGQIVSSXPA 826
VEPYNSI F + + + NRLIGQIVSS A
Sbjct: 181 VEPYNSILTTHTTLEHSDCSFMVDN-EAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 239
Query: 827 S 829
S
Sbjct: 240 S 240
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3
Query: 690 KHSDCAFMVDNEAXYDICRR 749
+HSDC+FMVDNEA YDICRR
Sbjct: 195 EHSDCSFMVDNEAIYDICRR 214
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 320 bits (785), Expect = 1e-87
Identities = 145/188 (77%), Positives = 164/188 (87%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 283
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 643
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 644 VVEPYNSI 667
VVEPYNSI
Sbjct: 179 VVEPYNSI 186
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +3
Query: 690 KHSDCAFMVDNEAXYDICRR 749
+HSDCAFMVDNEA YDICRR
Sbjct: 194 EHSDCAFMVDNEAIYDICRR 213
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 320 bits (785), Expect = 1e-87
Identities = 145/188 (77%), Positives = 164/188 (87%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 283
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 643
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 644 VVEPYNSI 667
VVEPYNSI
Sbjct: 179 VVEPYNSI 186
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +3
Query: 690 KHSDCAFMVDNEAXYDICRR 749
+HSDCAFMVDNEA YDICRR
Sbjct: 194 EHSDCAFMVDNEAIYDICRR 213
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 318 bits (782), Expect = 2e-87
Identities = 144/188 (76%), Positives = 164/188 (87%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 283
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 643
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 644 VVEPYNSI 667
VVEPYNSI
Sbjct: 179 VVEPYNSI 186
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +3
Query: 690 KHSDCAFMVDNEAXYDICRR 749
+HSDCAFMVDNEA YDICRR
Sbjct: 194 EHSDCAFMVDNEAIYDICRR 213
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 318 bits (782), Expect = 2e-87
Identities = 156/246 (63%), Positives = 183/246 (74%), Gaps = 1/246 (0%)
Frame = +2
Query: 95 SNQMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETG 274
+N+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET
Sbjct: 3 NNRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETM 62
Query: 275 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 454
AGKHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+
Sbjct: 63 AGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDV 122
Query: 455 VLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 634
V+DR+R+L + C GLQGFL+FH LLMERLSVDYGKKSKLEF IYPAPQV
Sbjct: 123 VMDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQV 182
Query: 635 STAVVEPYNSIXXXXXXXXXXXXCFHGRQ*SXL*HLPPXXSTLSAQPTPT-*NRLIGQIV 811
ST++VEPYNSI F + + L A+PT T NRLI Q++
Sbjct: 183 STSMVEPYNSILTTHTTLEHSDCSFMVDN-EAIYDICRRNLDL-ARPTYTNLNRLIAQVI 240
Query: 812 SSXPAS 829
SS AS
Sbjct: 241 SSVTAS 246
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3
Query: 690 KHSDCAFMVDNEAXYDICRR 749
+HSDC+FMVDNEA YDICRR
Sbjct: 201 EHSDCSFMVDNEAIYDICRR 220
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 316 bits (777), Expect = 1e-86
Identities = 143/188 (76%), Positives = 163/188 (86%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 283
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 643
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQV TA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTA 178
Query: 644 VVEPYNSI 667
VVEPYNSI
Sbjct: 179 VVEPYNSI 186
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +3
Query: 690 KHSDCAFMVDNEAXYDICRR 749
+HSDCAFMVDNEA YDICRR
Sbjct: 194 EHSDCAFMVDNEAIYDICRR 213
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 314 bits (770), Expect = 7e-86
Identities = 142/188 (75%), Positives = 162/188 (86%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 283
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 643
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 644 VVEPYNSI 667
VVEPYNSI
Sbjct: 179 VVEPYNSI 186
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3
Query: 690 KHSDCAFMVDNEAXYDICRR 749
+HSDCAFMVDNEA YDIC+R
Sbjct: 194 EHSDCAFMVDNEAIYDICKR 213
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 314 bits (770), Expect = 7e-86
Identities = 142/188 (75%), Positives = 162/188 (86%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 283
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 643
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 644 VVEPYNSI 667
VVEPYNSI
Sbjct: 179 VVEPYNSI 186
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3
Query: 690 KHSDCAFMVDNEAXYDICRR 749
+HSDCAFMVDNEA YDIC+R
Sbjct: 194 EHSDCAFMVDNEAIYDICKR 213
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 312 bits (766), Expect = 2e-85
Identities = 136/188 (72%), Positives = 162/188 (86%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 283
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 643
R+R+L ++C LQGFLIFH L+MERLS+DYGKK+KLEF+IYPAPQ+ST+
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTS 180
Query: 644 VVEPYNSI 667
+VEPYNS+
Sbjct: 181 MVEPYNSL 188
Score = 32.7 bits (71), Expect = 0.34
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +3
Query: 690 KHSDCAFMVDNEAXYDICR 746
+HSDC+F++DNEA Y+I +
Sbjct: 196 EHSDCSFIMDNEAIYEITK 214
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 295 bits (723), Expect = 3e-80
Identities = 133/188 (70%), Positives = 153/188 (81%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 283
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 643
RIR+LA+ C GLQGF +FH +LMERLS +YGKKSKLEF+IYPAPQ+ST+
Sbjct: 118 RIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTS 177
Query: 644 VVEPYNSI 667
VVEPYNSI
Sbjct: 178 VVEPYNSI 185
Score = 45.2 bits (102), Expect = 6e-05
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +3
Query: 690 KHSDCAFMVDNEAXYDICRRXSR 758
+HSDC+FMVDNEA YDICRR R
Sbjct: 193 EHSDCSFMVDNEAIYDICRRNLR 215
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 293 bits (720), Expect = 8e-80
Identities = 147/242 (60%), Positives = 173/242 (71%), Gaps = 1/242 (0%)
Frame = +2
Query: 107 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 286
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 287 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 467 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 646
+++LA+ C GLQGF+IFH LLMERLS +YGKK KLEFAIYPAPQVST++
Sbjct: 128 VKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSM 187
Query: 647 VEPYNSIXXXXXXXXXXXXCFHGRQ*SXL*HLPPXXSTLSAQPTPT-*NRLIGQIVSSXP 823
VEPYNSI F + + L A+PT T NRL+ QI+SS
Sbjct: 188 VEPYNSILMTHTTLEHSDCTFMVDN-EAIYDICRRNLDL-ARPTYTNLNRLVAQIISSIT 245
Query: 824 AS 829
AS
Sbjct: 246 AS 247
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 690 KHSDCAFMVDNEAXYDICRR 749
+HSDC FMVDNEA YDICRR
Sbjct: 202 EHSDCTFMVDNEAIYDICRR 221
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 274 bits (673), Expect = 4e-74
Identities = 134/241 (55%), Positives = 162/241 (67%)
Frame = +2
Query: 107 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 286
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 287 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 467 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 646
IRK + C GLQGFL+FH LLMERLSV++GKKSKLEF++YPAPQVST+V
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSV 184
Query: 647 VEPYNSIXXXXXXXXXXXXCFHGRQ*SXL*HLPPXXSTLSAQPTPT*NRLIGQIVSSXPA 826
VEPYNSI F + L + NRLI Q+VSS A
Sbjct: 185 VEPYNSILTTHTTLELSDCSFMVDN-EAIYDLCRQKLHVERPSYSNLNRLIAQVVSSITA 243
Query: 827 S 829
S
Sbjct: 244 S 244
Score = 38.3 bits (85), Expect = 0.007
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3
Query: 696 SDCAFMVDNEAXYDICRR 749
SDC+FMVDNEA YD+CR+
Sbjct: 201 SDCSFMVDNEAIYDLCRQ 218
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 250 bits (611), Expect = 1e-66
Identities = 127/221 (57%), Positives = 153/221 (69%), Gaps = 1/221 (0%)
Frame = +2
Query: 170 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 349
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 350 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXX 529
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 530 XXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIXXXXXXXXXXXXCF 709
LLMERLS +YGKK KLEFAIYPAPQVST++VEPYNSI F
Sbjct: 121 GGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTF 180
Query: 710 HGRQ*SXL*HLPPXXSTLSAQPTPT-*NRLIGQIVSSXPAS 829
+ + L A+PT T NRL+ QI+SS AS
Sbjct: 181 MVDN-EAIYDICRRNLDL-ARPTYTNLNRLVAQIISSITAS 219
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 690 KHSDCAFMVDNEAXYDICRR 749
+HSDC FMVDNEA YDICRR
Sbjct: 174 EHSDCTFMVDNEAIYDICRR 193
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 167 bits (405), Expect = 1e-41
Identities = 81/187 (43%), Positives = 112/187 (59%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 283
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 643
+RK A+ C LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 644 VVEPYNS 664
VVEPYN+
Sbjct: 179 VVEPYNA 185
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 690 KHSDCAFMVDNEAXYDICRR 749
+++D F +DNEA YDIC R
Sbjct: 194 ENTDETFCIDNEALYDICFR 213
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 165 bits (402), Expect = 3e-41
Identities = 81/187 (43%), Positives = 113/187 (60%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 283
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 643
IRK A+ C LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 644 VVEPYNS 664
VVEPYN+
Sbjct: 179 VVEPYNA 185
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 690 KHSDCAFMVDNEAXYDICRR 749
+++D + +DNEA YDIC R
Sbjct: 194 ENTDETYCIDNEALYDICYR 213
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 164 bits (399), Expect = 6e-41
Identities = 80/187 (42%), Positives = 113/187 (60%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 283
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 643
IRK A+ C LQGF + H LL+ ++ ++ + F++ P+P+VS
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDT 178
Query: 644 VVEPYNS 664
VVEPYN+
Sbjct: 179 VVEPYNA 185
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 690 KHSDCAFMVDNEAXYDICRR 749
+++D + +DNEA YDIC R
Sbjct: 194 ENTDETYCIDNEALYDICYR 213
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 163 bits (395), Expect = 2e-40
Identities = 79/187 (42%), Positives = 112/187 (59%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 283
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 643
+RK A+ LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 644 VVEPYNS 664
VVEPYN+
Sbjct: 179 VVEPYNA 185
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 690 KHSDCAFMVDNEAXYDICRR 749
+++D F +DNEA YDIC R
Sbjct: 194 ENTDSTFCIDNEALYDICFR 213
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 163 bits (395), Expect = 2e-40
Identities = 79/187 (42%), Positives = 112/187 (59%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 283
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 643
+RK A+ LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 644 VVEPYNS 664
VVEPYN+
Sbjct: 179 VVEPYNA 185
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 690 KHSDCAFMVDNEAXYDICRR 749
+++D F +DNEA YDIC R
Sbjct: 194 ENTDSTFCIDNEALYDICFR 213
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 162 bits (393), Expect = 3e-40
Identities = 78/187 (41%), Positives = 109/187 (58%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 283
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 643
+RK A+ C LQGF + H LL+ ++ +Y + + F++ P+P+VS
Sbjct: 119 VVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDT 178
Query: 644 VVEPYNS 664
VVEPYN+
Sbjct: 179 VVEPYNA 185
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 690 KHSDCAFMVDNEAXYDICRR 749
+++D F +DNEA YDIC R
Sbjct: 194 ENTDETFCIDNEALYDICFR 213
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 144 bits (350), Expect = 5e-35
Identities = 75/188 (39%), Positives = 107/188 (56%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 283
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 643
IR+ A+ L+GF + H LL+ +L +Y K+ +I P+ +VS
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDT 178
Query: 644 VVEPYNSI 667
VVEPYN+I
Sbjct: 179 VVEPYNAI 186
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 144 bits (350), Expect = 5e-35
Identities = 75/188 (39%), Positives = 107/188 (56%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 283
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 643
IR+ A+ L+GF + H LL+ +L +Y K+ +I P+ +VS
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDT 178
Query: 644 VVEPYNSI 667
VVEPYN+I
Sbjct: 179 VVEPYNAI 186
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 91.5 bits (217), Expect = 7e-19
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 4/186 (2%)
Frame = +2
Query: 116 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 295
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 296 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 466
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 467 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST-A 643
I + A+ L G L H LL+ERL + KK ++++ ST
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 644 VVEPYN 661
VV PYN
Sbjct: 184 VVHPYN 189
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 91.5 bits (217), Expect = 7e-19
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 4/186 (2%)
Frame = +2
Query: 116 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 295
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 296 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 466
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 467 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST-A 643
I + A+ L G L H LL+ERL + KK ++++ ST
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 644 VVEPYN 661
VV PYN
Sbjct: 184 VVHPYN 189
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.59
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 132 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 287
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical
protein F19B2.6 protein.
Length = 807
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 613 HLPRASGFHCRRRALQLYPHHPHNP 687
H P SG+H + YP+HP NP
Sbjct: 411 HEPAPSGYHPPQAQSNCYPNHPPNP 435
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 146 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 325
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 326 VDE 334
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 146 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 325
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 326 VDE 334
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 146 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 325
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 326 VDE 334
DE
Sbjct: 116 ADE 118
>AL110485-19|CAB60367.2| 529|Caenorhabditis elegans Hypothetical
protein Y46G5A.24 protein.
Length = 529
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -1
Query: 637 GNLRRGVDGELQFRLLAVVNGETLHQ*GSEPRAGTSTEGVEDQESLQTGTLVSELADSVQ 458
GNL V +L+F + N E HQ EP + EG+E+ + G L+ + S +
Sbjct: 435 GNLAGVVKADLKFGNHLIWNRENPHQICGEPIFVPNPEGIEEDD----GILIVPIMSSSE 490
Query: 457 NQI 449
Q+
Sbjct: 491 KQV 493
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 74 HLSIEKNSNQMRECISVHVGQAGVQ---IGNACWELYCLEHGIQP 199
H+ IEK +RE + H+G+ Q IGNA + + H + P
Sbjct: 198 HVLIEKEVEDLREKVREHLGELSKQSETIGNALHSIDSVIHELTP 242
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 323 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 323 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 323 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 323 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 323 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 323 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 323 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 323 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,253,528
Number of Sequences: 27780
Number of extensions: 415680
Number of successful extensions: 1069
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -