Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_P02
         (845 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    29   0.13 
AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    27   0.72 
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    27   0.72 
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    26   1.3  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   2.2  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   5.1  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   5.1  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    24   6.7  

>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 29.5 bits (63), Expect = 0.13
 Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
 Frame = +3

Query: 342 MAETDSETIPNGTGPLSTEEEDERLKQRPADID-ADVREMERRKRVEALMSSKLFREELE 518
           + E   E +P    P     E+E+ ++  AD + AD  E E  +  + L  ++L  EELE
Sbjct: 61  LPEDAPEPVPEDGSPDEEHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAEELE 120

Query: 519 RVLDQQMHEGGDAPLLQRIKEMVGGRLHTGSLRGS*LRFADQRHPRYRR 665
              ++Q         L  +K  + GRL   ++    +R A  R P  RR
Sbjct: 121 ---ERQQE-------LDYLKRYLVGRLQAVAILDRRVRPAVIRRPWIRR 159


>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 27.1 bits (57), Expect = 0.72
 Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = +1

Query: 520 GSSTSRCTRAATLRSCRGSRRWSAG-DCTPEASGGPSC 630
           G +  RC R     +C  + RWSA   CT    G P C
Sbjct: 134 GFAVDRCVRLLIYENCP-TARWSASVACTKSRQGVPFC 170


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 27.1 bits (57), Expect = 0.72
 Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = +1

Query: 520 GSSTSRCTRAATLRSCRGSRRWSAG-DCTPEASGGPSC 630
           G +  RC R     +C  + RWSA   CT    G P C
Sbjct: 236 GFAVDRCVRLLIYENCP-TARWSASVACTKSRQGVPFC 272


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = +3

Query: 390  STEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGD 554
            +  + +E+  +RP+   +  R  ERR  + A M+    R    +  +++  EGGD
Sbjct: 1062 TVRQREEQCGERPSMPSSSPRTSERRANIRARMARLRQRHRQHQQDERRGVEGGD 1116


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
 Frame = +1

Query: 352  RTQRRSRTAPGPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSCPRSCSAKNWNGSST 531
            R++ RSR+        R  S     R  S   S   +AG  S+ S  RS S      S  
Sbjct: 1102 RSRSRSRSGSAKGSRSRSRSGSGGSRSRSRSRSRSQSAG--SRKSGSRSRSRSGSQASRG 1159

Query: 532  SRCTRAATLRSCRGSR-RWSAGDCTPEAS 615
            SR +R+ + RS  GSR R  +G  + +AS
Sbjct: 1160 SRRSRSRS-RSRSGSRSRSRSGSGSRQAS 1187


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = +3

Query: 393 TEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP 560
           T E  + ++ R AD +A  RE+E RKR E        +++ E   D +  + G  P
Sbjct: 20  TRESLQAIEARIADEEAKQRELE-RKRAEGESDFGRKKKKKEIRYDDEDEDEGPQP 74


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 591 GRLHTGSLRGS*LRFADQRHPRYRRH 668
           GRL TG + G+  R   +R P  RRH
Sbjct: 319 GRLRTGPVPGAAERHRRRRPPPRRRH 344


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 12/36 (33%), Positives = 14/36 (38%)
 Frame = -3

Query: 708 QLAAEYLLPLLIPYAFDTSDVVDRQNAARTP*GFRC 601
           Q+     L  L P   D  DV+D     R P   RC
Sbjct: 450 QIGISRALSALAPIQLDLDDVIDAPPIGRNPGHERC 485


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 853,669
Number of Sequences: 2352
Number of extensions: 18152
Number of successful extensions: 63
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89718867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)