SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_P02
         (845 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF166168-1|AAD49857.1|  679|Caenorhabditis elegans adducin-relat...    48   1e-05
AF166167-1|AAD49856.1|  732|Caenorhabditis elegans adducin-relat...    48   1e-05
AF039043-6|AAP82653.1|  718|Caenorhabditis elegans Adducin prote...    48   1e-05
AF039043-5|AAK70639.1|  732|Caenorhabditis elegans Adducin prote...    48   1e-05
AF039043-4|AAL32219.1|  702|Caenorhabditis elegans Adducin prote...    48   1e-05
AF039043-3|AAM54181.1|  682|Caenorhabditis elegans Adducin prote...    48   1e-05
AF039043-2|AAK70638.1|  679|Caenorhabditis elegans Adducin prote...    48   1e-05
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr...    38   0.012
Z81586-9|CAB04699.2|  676|Caenorhabditis elegans Hypothetical pr...    32   0.45 
AL132949-13|CAB70106.2|  425|Caenorhabditis elegans Hypothetical...    32   0.59 
AF197575-1|AAF18441.1|  425|Caenorhabditis elegans ASC-1 protein.      32   0.59 
Z81533-5|CAB04337.1|  342|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z27079-1|CAA81593.2|  411|Caenorhabditis elegans Hypothetical pr...    30   2.4  
AC024777-5|AAF60564.1|  506|Caenorhabditis elegans Hypothetical ...    30   2.4  
AL132904-7|CAC35838.1|  430|Caenorhabditis elegans Hypothetical ...    29   3.1  
AL034364-4|CAA22250.2|  290|Caenorhabditis elegans Hypothetical ...    29   3.1  
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p...    29   4.2  
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U41036-1|AAA82384.1|  315|Caenorhabditis elegans Hypothetical pr...    29   5.5  
AF100657-3|AAC68961.1|  335|Caenorhabditis elegans Hypothetical ...    29   5.5  
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ...    28   7.3  
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ...    28   7.3  
AC025716-3|AAK39618.1|  690|Caenorhabditis elegans Hypothetical ...    28   7.3  
Z81041-9|CAJ55253.1|  824|Caenorhabditis elegans Hypothetical pr...    28   9.6  
Z81041-8|CAB02784.1|  829|Caenorhabditis elegans Hypothetical pr...    28   9.6  
AC024751-4|AAK21505.1|  425|Caenorhabditis elegans Hypothetical ...    28   9.6  
AC006757-3|AAF60541.2|  916|Caenorhabditis elegans Hypothetical ...    28   9.6  

>AF166168-1|AAD49857.1|  679|Caenorhabditis elegans adducin-related
           protein protein.
          Length = 679

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
 Frame = +3

Query: 420 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 587
           QRPA I  D+ EMERRKRV+ ++ SK F  ELE V+ Q+       P    +LQ++ ++ 
Sbjct: 27  QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86

Query: 588 --GGRLHTGSLR---GS*LRFADQR 647
              G +  G+L    G+ +  AD R
Sbjct: 87  VPQGNMSFGNLHTYGGNTIAIADLR 111


>AF166167-1|AAD49856.1|  732|Caenorhabditis elegans adducin-related
           protein protein.
          Length = 732

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
 Frame = +3

Query: 420 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 587
           QRPA I  D+ EMERRKRV+ ++ SK F  ELE V+ Q+       P    +LQ++ ++ 
Sbjct: 27  QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86

Query: 588 --GGRLHTGSLR---GS*LRFADQR 647
              G +  G+L    G+ +  AD R
Sbjct: 87  VPQGNMSFGNLHTYGGNTIAIADLR 111


>AF039043-6|AAP82653.1|  718|Caenorhabditis elegans Adducin protein
           1, isoform e protein.
          Length = 718

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
 Frame = +3

Query: 420 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 587
           QRPA I  D+ EMERRKRV+ ++ SK F  ELE V+ Q+       P    +LQ++ ++ 
Sbjct: 27  QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86

Query: 588 --GGRLHTGSLR---GS*LRFADQR 647
              G +  G+L    G+ +  AD R
Sbjct: 87  VPQGNMSFGNLHTYGGNTIAIADLR 111


>AF039043-5|AAK70639.1|  732|Caenorhabditis elegans Adducin protein
           1, isoform b protein.
          Length = 732

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
 Frame = +3

Query: 420 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 587
           QRPA I  D+ EMERRKRV+ ++ SK F  ELE V+ Q+       P    +LQ++ ++ 
Sbjct: 27  QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86

Query: 588 --GGRLHTGSLR---GS*LRFADQR 647
              G +  G+L    G+ +  AD R
Sbjct: 87  VPQGNMSFGNLHTYGGNTIAIADLR 111


>AF039043-4|AAL32219.1|  702|Caenorhabditis elegans Adducin protein
           1, isoform c protein.
          Length = 702

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
 Frame = +3

Query: 420 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 587
           QRPA I  D+ EMERRKRV+ ++ SK F  ELE V+ Q+       P    +LQ++ ++ 
Sbjct: 27  QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86

Query: 588 --GGRLHTGSLR---GS*LRFADQR 647
              G +  G+L    G+ +  AD R
Sbjct: 87  VPQGNMSFGNLHTYGGNTIAIADLR 111


>AF039043-3|AAM54181.1|  682|Caenorhabditis elegans Adducin protein
           1, isoform d protein.
          Length = 682

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
 Frame = +3

Query: 420 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 587
           QRPA I  D+ EMERRKRV+ ++ SK F  ELE V+ Q+       P    +LQ++ ++ 
Sbjct: 27  QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86

Query: 588 --GGRLHTGSLR---GS*LRFADQR 647
              G +  G+L    G+ +  AD R
Sbjct: 87  VPQGNMSFGNLHTYGGNTIAIADLR 111


>AF039043-2|AAK70638.1|  679|Caenorhabditis elegans Adducin protein
           1, isoform a protein.
          Length = 679

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
 Frame = +3

Query: 420 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 587
           QRPA I  D+ EMERRKRV+ ++ SK F  ELE V+ Q+       P    +LQ++ ++ 
Sbjct: 27  QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86

Query: 588 --GGRLHTGSLR---GS*LRFADQR 647
              G +  G+L    G+ +  AD R
Sbjct: 87  VPQGNMSFGNLHTYGGNTIAIADLR 111


>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
            F36H2.3 protein.
          Length = 1388

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 31/88 (35%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
 Frame = +1

Query: 367  SRTAPGPC--PPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSCPRSCSAKNWNGSSTSRC 540
            S T  GPC  PP     A       S+   A W AGS + +SCP   + +   G+S S C
Sbjct: 1248 SGTGTGPCYTPPLTPVGA---TLTYSSGYFAPWTAGSTATMSCP---AGQTVIGTSISYC 1301

Query: 541  TRAA---TLRSCRGSRRWSAGDCTPEAS 615
            T +A    L SC GS    A   T   S
Sbjct: 1302 TNSAWSPALGSCSGSSVGQASTTTTTCS 1329


>Z81586-9|CAB04699.2|  676|Caenorhabditis elegans Hypothetical
           protein T05F1.11 protein.
          Length = 676

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +3

Query: 396 EEEDERLKQRPADIDADVREMERRKRV-EALMSSKLFREELERVLDQQMHEGGDAPLLQR 572
           EE+++R K   ++    ++E E+RKRV E  M  K   EE +  L+ +M E  +   ++R
Sbjct: 449 EEDEKRRKAEESERVRKLKEEEKRKRVLEEEMEMKRKNEEAKIKLEAEMREKAEQAEIKR 508

Query: 573 IKE 581
            +E
Sbjct: 509 REE 511


>AL132949-13|CAB70106.2|  425|Caenorhabditis elegans Hypothetical
           protein Y53F4B.15 protein.
          Length = 425

 Score = 31.9 bits (69), Expect = 0.59
 Identities = 25/80 (31%), Positives = 40/80 (50%)
 Frame = +3

Query: 348 ETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVL 527
           ++D  TI N   P  +  + E LK R  ++ A +RE ER+K V +L        E+ R  
Sbjct: 141 QSDYSTIENS--PFLSASDREALKLRREELKA-LREKERKKFVVSLDFDGGVVHEMTRRS 197

Query: 528 DQQMHEGGDAPLLQRIKEMV 587
             +  +  + P++QRI E V
Sbjct: 198 GTEALQDKNDPVIQRIMERV 217


>AF197575-1|AAF18441.1|  425|Caenorhabditis elegans ASC-1 protein.
          Length = 425

 Score = 31.9 bits (69), Expect = 0.59
 Identities = 25/80 (31%), Positives = 40/80 (50%)
 Frame = +3

Query: 348 ETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVL 527
           ++D  TI N   P  +  + E LK R  ++ A +RE ER+K V +L        E+ R  
Sbjct: 141 QSDYSTIENS--PFLSASDREALKLRREELKA-LREKERKKFVVSLDFDGGVVHEMTRRS 197

Query: 528 DQQMHEGGDAPLLQRIKEMV 587
             +  +  + P++QRI E V
Sbjct: 198 GTEALQDKNDPVIQRIMERV 217


>Z81533-5|CAB04337.1|  342|Caenorhabditis elegans Hypothetical
           protein F36G9.8 protein.
          Length = 342

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -2

Query: 151 ICKNTHLLFSLYFLQH*LNRHRMYRRYFINFVRSKKFST-LPSQSM 17
           +C +TH       + +  NRH  YR++  + +RS+KFST LP+  +
Sbjct: 285 LCMSTHTFLGTLSMLY-FNRH--YRQWLCSIIRSRKFSTSLPTSKI 327


>Z27079-1|CAA81593.2|  411|Caenorhabditis elegans Hypothetical
           protein T05G5.1 protein.
          Length = 411

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +3

Query: 396 EEEDERLKQRPADIDADVREMERRKR-VEALMSSKLFREELERVLDQQMHEGGD 554
           EEE  RL  +    +A VR+ ERR++  E  +  +L  +  + + +Q  +EGGD
Sbjct: 190 EEESRRLAAQRETDEARVRDEERRRQETEKEVEKELNDKRTQSMNEQFEYEGGD 243


>AC024777-5|AAF60564.1|  506|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.1 protein.
          Length = 506

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = -1

Query: 686 SPFSYPMPSIPRMSLIGKTQLGPPEASGVQSPADHLLDPLQERSVAA 546
           +P ++PMPS   +S IG TQL  P   G  S       P Q++   A
Sbjct: 456 APLNFPMPS---LSSIGITQLATPPVPGATSYQPPSFPPQQQQQYGA 499


>AL132904-7|CAC35838.1|  430|Caenorhabditis elegans Hypothetical
           protein Y111B2A.10a protein.
          Length = 430

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/66 (22%), Positives = 37/66 (56%)
 Frame = +3

Query: 387 LSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAPLL 566
           L  E ED R+ +   +++++  E E   +++     K   ++L+  +++++++ GD  L 
Sbjct: 49  LEFEPEDRRVPEVAEEVESEDEE-EEDVQIKYPYERKDAYQDLQERIERRLNDSGDEKLE 107

Query: 567 QRIKEM 584
           Q+ KE+
Sbjct: 108 QKAKEL 113


>AL034364-4|CAA22250.2|  290|Caenorhabditis elegans Hypothetical
           protein W06D4.2 protein.
          Length = 290

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = -3

Query: 714 GGQLAAEYLLPLLIPYAFDTSDV 646
           GGQL+  Y L  LI Y FDTS V
Sbjct: 96  GGQLSGAYALTPLIQYVFDTSVV 118


>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
           protein C34E11.3 protein.
          Length = 1577

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +3

Query: 399 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 518
           EE+E+LK    D+  ++ EM+ + R E +   +  + ELE
Sbjct: 126 EENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELE 165


>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
           protein C34E11.3 protein.
          Length = 1577

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +3

Query: 399 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 518
           EE+E+LK    D+  ++ EM+ + R E +   +  + ELE
Sbjct: 126 EENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELE 165


>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
           protein C34E11.3 protein.
          Length = 1577

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +3

Query: 399 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 518
           EE+E+LK    D+  ++ EM+ + R E +   +  + ELE
Sbjct: 126 EENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELE 165


>U41036-1|AAA82384.1|  315|Caenorhabditis elegans Hypothetical
           protein T14E8.2 protein.
          Length = 315

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +3

Query: 342 MAETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELER 521
           M E D + + N +   S EEE+ +  +   D D   +E ERR++ EA       R  L  
Sbjct: 248 MNEKDDDDV-NKSVEESDEEEENQESEEQEDNDKAEKEEERRRQEEAARQHSKRRRTLRH 306

Query: 522 VL 527
           +L
Sbjct: 307 LL 308


>AF100657-3|AAC68961.1|  335|Caenorhabditis elegans Hypothetical
           protein F52C12.3 protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = -1

Query: 722 RYTAASLQRSIFSP--FSYPMPSIPRMSLIGKTQLGPP 615
           R T  ++   +FSP  FS+ +P+ P  SLI  +  GPP
Sbjct: 259 RITVENVDFHVFSPASFSHRLPARPLFSLICYSATGPP 296


>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
            protein Y46G5A.1b protein.
          Length = 1021

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +1

Query: 325  RLELSEWLRRTQRRSRTAPGPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASK 480
            R E+ E   R  R + T   P P R++++  +       P+  KWN G+AS+
Sbjct: 876  RDEIHEIQSRRSRANSTGRSPYPKRKESARGAGAPKGPPPVQHKWN-GNASQ 926


>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
            protein Y46G5A.1a protein.
          Length = 1085

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +1

Query: 325  RLELSEWLRRTQRRSRTAPGPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASK 480
            R E+ E   R  R + T   P P R++++  +       P+  KWN G+AS+
Sbjct: 876  RDEIHEIQSRRSRANSTGRSPYPKRKESARGAGAPKGPPPVQHKWN-GNASQ 926


>AC025716-3|AAK39618.1|  690|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.10 protein.
          Length = 690

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = +3

Query: 393 TEEEDERLKQRPADIDAD---VREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAPL 563
           T  E+  LK    D+ A+   ++EM+   R   L  SK F+E L R+ D+      D   
Sbjct: 82  TTSEENNLKILNRDLVAENLELKEMKEELRKIWLSDSKKFQEALTRISDENTKLQKDCHE 141

Query: 564 LQRIKE 581
           L+ I++
Sbjct: 142 LESIRQ 147


>Z81041-9|CAJ55253.1|  824|Caenorhabditis elegans Hypothetical
           protein C27A7.1b protein.
          Length = 824

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 480 ALMSSKLFREELERVLDQQMHEGGDAPLLQRIKEMVG 590
           A+ SSK+  EEL R L Q + + G  P L+R+  M G
Sbjct: 82  AMSSSKVQLEELTRKLSQPLEQLG--PTLERLSNMPG 116


>Z81041-8|CAB02784.1|  829|Caenorhabditis elegans Hypothetical
           protein C27A7.1a protein.
          Length = 829

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 480 ALMSSKLFREELERVLDQQMHEGGDAPLLQRIKEMVG 590
           A+ SSK+  EEL R L Q + + G  P L+R+  M G
Sbjct: 87  AMSSSKVQLEELTRKLSQPLEQLG--PTLERLSNMPG 121


>AC024751-4|AAK21505.1|  425|Caenorhabditis elegans Hypothetical
           protein Y18H1A.1 protein.
          Length = 425

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = -3

Query: 423 AASSARLPPR--WTGARCRSGSSLSPSQPFRQLESIDLSSKTWVSNPVARVLQESCTVQQ 250
           +  +A  PP+   +G + +   +LS S P     S+   +  WV   VA+   +S    +
Sbjct: 68  STENAFQPPKDLISGRKPKGAPNLSGSVPLSHKSSLTGGADKWVGEAVAKNWMDSIDTAE 127

Query: 249 MARRSDKL 226
           + +  DKL
Sbjct: 128 VKKEYDKL 135


>AC006757-3|AAF60541.2|  916|Caenorhabditis elegans Hypothetical
           protein Y40C7B.1 protein.
          Length = 916

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 12/61 (19%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 399 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLD-QQMHEGGDAPLLQRI 575
           + +E +KQ+  + +  + +   ++++E L   KLF +  +  L  ++ H+  +   L+++
Sbjct: 249 KREEEIKQQNQEREKQINDDFEKRKLEKLQREKLFEKNKQAKLQREKAHQESERRKLEKL 308

Query: 576 K 578
           K
Sbjct: 309 K 309


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,457,127
Number of Sequences: 27780
Number of extensions: 400868
Number of successful extensions: 1529
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1527
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -