Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_P01
         (830 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69302-6|CAL36504.1|  472|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U29488-4|AAL27235.1|  401|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical pr...    29   5.4  
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n...    29   5.4  
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    28   9.4  
AF068721-1|AAC19263.1|  369|Caenorhabditis elegans Hypothetical ...    28   9.4  
AC024748-4|AAF60410.1|  251|Caenorhabditis elegans Hypothetical ...    28   9.4  

>Z69302-6|CAL36504.1|  472|Caenorhabditis elegans Hypothetical
           protein F40F8.11 protein.
          Length = 472

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/55 (27%), Positives = 23/55 (41%)
 Frame = +2

Query: 17  TTHCPPIMSAGRHEMDPHDDWKSAERPNYLTNVDLEYPVLRATVHSAVQAAQAPL 181
           TT  P      RH   P+  W S  +  +L  +D   P  + +V    +AA  P+
Sbjct: 71  TTSKPVQKPYRRHHQRPNKAWSSGSQQFHLVTIDPSKPHEKPSVSKIAEAAPKPI 125


>U29488-4|AAL27235.1|  401|Caenorhabditis elegans Hypothetical
           protein C56C10.7a protein.
          Length = 401

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/53 (26%), Positives = 28/53 (52%)
 Frame = -1

Query: 461 NDSRNVSGAVRNDGRAHERHYFDRVILDVSPGVAVVLVAHRDSVGDLAILVRP 303
           N +++V    + +  ++   + ++V LD S    V  +AH D  GD+  L++P
Sbjct: 185 NANQDVYLEAQIENTSNANMFLEKVELDPSQHYNVTSIAHEDEFGDVGKLLKP 237


>Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical
           protein F07H5.8 protein.
          Length = 872

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -2

Query: 589 SNRAARSPDSIAEACSSARQPGA*YXWDSTGIP*MTTMP 473
           + +A R+P++   AC  A QP   Y + S+G   ++T+P
Sbjct: 346 ATQATRAPETCIPACQPACQPQCVYQYLSSGSSGISTVP 384


>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
            Prion-like-(q/n-rich)-domain-bearingprotein protein 20
            protein.
          Length = 1254

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +2

Query: 320  QDPQQNPGARRERLRHPGLHQG*LGQNSDAHERAHHSEQRQRHYE 454
            Q   Q+PGA      HP +H   L Q+    ++ HH E    H++
Sbjct: 1155 QQQHQHPGAGGHLQLHPQMHMQMLPQHH--QQQQHHEEMMMMHHQ 1197


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +2

Query: 341 GARRERLRHPGLHQG*LGQNSDAHERAHHSEQRQRHY 451
           GA  E   H G H G      + H   HHS+  ++ +
Sbjct: 690 GAHHEHGAHHGAHHGHHDDKENHHHHGHHSKHSKKQH 726


>AF068721-1|AAC19263.1|  369|Caenorhabditis elegans Hypothetical
           protein ZK1055.5 protein.
          Length = 369

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 369 RAYIKDDSVKIVTLMSAPIIPNSARDITRIVNERVGMVVIYGM 497
           RAYI D   +   +    I+   ARD+ R+V++  G+ + Y M
Sbjct: 134 RAYIPDGEQRDYLMNKYNIVTWHARDVLRLVDDMSGISMHYAM 176


>AC024748-4|AAF60410.1|  251|Caenorhabditis elegans Hypothetical
           protein Y110A2AR.1 protein.
          Length = 251

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +3

Query: 144 PYIAQYKLLKLPFTGELIEHVDYW---GEGSIVNGGLYSGFRNCY 269
           P I  +K+LK P    LIE + YW   G   IV+  L + + +C+
Sbjct: 17  PVIGSFKVLKKPTKPRLIECMHYWTIYGSFLIVDWFLSTFYVSCF 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,655,492
Number of Sequences: 27780
Number of extensions: 369552
Number of successful extensions: 1009
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)