Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_O24
(895 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 205 6e-53
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 133 3e-31
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 128 1e-29
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 127 2e-29
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 126 5e-29
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 124 2e-28
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 117 2e-26
AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated po... 117 3e-26
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 115 8e-26
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 115 1e-25
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 114 1e-25
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 110 2e-24
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 110 3e-24
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 110 3e-24
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 109 4e-24
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 107 3e-23
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 105 6e-23
AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 105 6e-23
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 105 8e-23
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 104 1e-22
AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p pro... 101 2e-21
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 97 2e-20
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 97 4e-20
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 96 5e-20
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 96 5e-20
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 96 5e-20
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 96 5e-20
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 96 5e-20
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 96 5e-20
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 96 5e-20
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 39 0.011
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 39 0.011
AY051559-1|AAK92983.1| 721|Drosophila melanogaster GH20931p pro... 30 4.9
AE014298-933|AAZ52502.1| 721|Drosophila melanogaster CG4523-PH,... 30 4.9
AE014298-932|AAZ52501.1| 721|Drosophila melanogaster CG4523-PG,... 30 4.9
AE014298-931|AAZ52500.1| 721|Drosophila melanogaster CG4523-PF,... 30 4.9
AE014298-930|AAZ52499.1| 721|Drosophila melanogaster CG4523-PE,... 30 4.9
AE014298-929|AAZ52498.1| 721|Drosophila melanogaster CG4523-PD,... 30 4.9
AE014298-928|AAZ52497.1| 721|Drosophila melanogaster CG4523-PC,... 30 4.9
AE014298-927|AAF46188.1| 721|Drosophila melanogaster CG4523-PB,... 30 4.9
AE014298-926|AAN09178.1| 721|Drosophila melanogaster CG4523-PA,... 30 4.9
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 205 bits (501), Expect = 6e-53
Identities = 102/165 (61%), Positives = 126/165 (76%)
Frame = +2
Query: 134 LDCDLTNDNQISELKILLNKFEHLFIHGYPHTRVNTGELEIRLKDESKTVERRPYRLSPV 313
+D +L DN+ ++L LL K F +G PHTRVNTGE++IRL D +KTV+RRPYRLSP
Sbjct: 410 IDTELV-DNEKAQLIELLEKHSTSFTNGIPHTRVNTGEMKIRLIDPTKTVQRRPYRLSPE 468
Query: 314 ERGKVRDIVNELLEHKIIRESKSPFASPIIIVKKKNGKDRMCVDYRELNRNTVRDHYPLP 493
ER VR V+EL+ I+R S SPFASP+++VKKKNG DR+CVD+RELN NT+ D YPLP
Sbjct: 469 EREVVRMQVSELIRCNIVRPSCSPFASPMLLVKKKNGTDRLCVDFRELNSNTISDKYPLP 528
Query: 494 IISDQIDQLAGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGL 628
+ISDQI +L G YFT +DMA+GFHQIPI S+E TAFV PDGL
Sbjct: 529 LISDQIARLRGANYFTCLDMASGFHQIPIHPESVEYTAFV-PDGL 572
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 133 bits (322), Expect = 3e-31
Identities = 68/170 (40%), Positives = 111/170 (65%), Gaps = 2/170 (1%)
Frame = +2
Query: 155 DNQISELKILLNK-FEHLFIHGY-PHTRVNTGELEIRLKDESKTVERRPYRLSPVERGKV 328
+N + L++ ++ F + +I+ P+ E+++ LK+ K P RLS E+ ++
Sbjct: 674 ENVSNRLQLEFDRLFRNFYINAKRPNEPTVRSEIQLCLKNP-KPFSCSPRRLSYTEKDRL 732
Query: 329 RDIVNELLEHKIIRESKSPFASPIIIVKKKNGKDRMCVDYRELNRNTVRDHYPLPIISDQ 508
+ +++E LE+ IR S S +ASPI++VKKK G RMCVD+R+LN+ T++D+YPLP+I D
Sbjct: 733 QKLLDEYLENGFIRPSDSEYASPIVLVKKKTGDLRMCVDFRKLNKMTMKDNYPLPLIDDL 792
Query: 509 IDQLAGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
+D++ FT +D+ GF + + + SI+ T+FVTP G YE+L MPFGL
Sbjct: 793 LDRMNEKTVFTKLDLKNGFFHVHVKKESIKYTSFVTPLGQYEWLRMPFGL 842
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 128 bits (308), Expect = 1e-29
Identities = 74/178 (41%), Positives = 102/178 (57%), Gaps = 6/178 (3%)
Frame = +2
Query: 143 DLTNDNQISELKILLNKFEHL-FIHGYPHTRVNTGELEIRLKDESKTVERRPYRLSPVER 319
D N + ++L LL +F+ L + G T N + IR + V R+PY +P
Sbjct: 109 DHLNSEEKAKLITLLKEFQDLQYKKGDQLTFTNNVKHTIRTS-HNDPVYRKPYGYAPGLD 167
Query: 320 GKVRDIVNELLEHKIIRESKSPFASPIIIVKKK-----NGKDRMCVDYRELNRNTVRDHY 484
+V + + E+L+ IIRES SP+ SPI++V KK K R+ +DYR LN T+ D Y
Sbjct: 168 TEVENQIKEMLDQGIIRESNSPYCSPIVVVPKKPDISGQKKYRIAIDYRYLNEITIADKY 227
Query: 485 PLPIISDQIDQLAGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
P+P + + + +L G YFTTID+ GFHQI + SI KTAF T G YEY MPFGL
Sbjct: 228 PIPNMDEILSKLGGCNYFTTIDLIKGFHQIEMDPESIPKTAFTTKTGHYEYTRMPFGL 285
Score = 29.5 bits (63), Expect = 6.5
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 661 HAVSVYQRCINRALAHLTSSPDQVCQVYVDDVL 759
+A + +QRC+N L L + ++C VY+DD++
Sbjct: 287 NAPATFQRCMNDVLRPLLN---KICMVYLDDII 316
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 127 bits (307), Expect = 2e-29
Identities = 76/184 (41%), Positives = 103/184 (55%), Gaps = 6/184 (3%)
Frame = +2
Query: 125 FGKLDCDLTNDNQISELKILLNKFEHL-FIHGYPHTRVNTGELEIRLKDESKTVERRPYR 301
F + D N + +LK LLNKF +L + G T NT + + S ++ Y
Sbjct: 155 FSQFRLDHLNQEETFKLKGLLNKFRNLEYKEGEKLTFTNTIKHVLNTTHNSPIYSKQ-YP 213
Query: 302 LSPVERGKVRDIVNELLEHKIIRESKSPFASPIIIVKKKN-----GKDRMCVDYRELNRN 466
L+ +V + V E+L +IRES SP+ SP +V KK K R+ +DYR+LN
Sbjct: 214 LAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEI 273
Query: 467 TVRDHYPLPIISDQIDQLAGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTM 646
T+ D YP+P + + + +L YFTTID+A GFHQI + E SI KTAF T G YEYL M
Sbjct: 274 TIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRM 333
Query: 647 PFGL 658
PFGL
Sbjct: 334 PFGL 337
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1065
Score = 126 bits (303), Expect = 5e-29
Identities = 72/178 (40%), Positives = 104/178 (58%), Gaps = 6/178 (3%)
Frame = +2
Query: 143 DLTNDNQISELKILLNKFEHL-FIHGYPHTRVNTGELEIRLKDESKTVERRPYRLSPVER 319
D ND + L +L +F + + G T +T + I K E + RRPY+
Sbjct: 150 DHLNDEERKALTSVLYEFSDIQYKEGENLTFTSTTKHVITTKHEDP-IYRRPYKYPQSFD 208
Query: 320 GKVRDIVNELLEHKIIRESKSPFASPIIIVKKK---NGKD--RMCVDYRELNRNTVRDHY 484
+V + + +++ IIR+S SP+ SP+ +V KK +GK R+ +DYR LN TV D Y
Sbjct: 209 EEVENQMKDMIRQGIIRKSNSPYCSPVWVVPKKPDASGKSKFRIVIDYRNLNEITVDDKY 268
Query: 485 PLPIISDQIDQLAGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
P+P++ + +D+L YFTTID+A GFHQI + E SI KTAF T +G +EY MPFGL
Sbjct: 269 PIPVMDEILDKLGNCQYFTTIDLAKGFHQIQMDENSIAKTAFSTKNGHFEYTRMPFGL 326
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 124 bits (299), Expect = 2e-28
Identities = 73/175 (41%), Positives = 103/175 (58%), Gaps = 6/175 (3%)
Frame = +2
Query: 152 NDNQISELKILLNKFEHL-FIHGYPHTRVNTGELEIRLKDESKTVERRPYRLSPVERGKV 328
N ++ LK L ++ + + G T +T + I+ + E V R+PY+ +V
Sbjct: 238 NAEEVECLKKFLYEYRDIQYKEGENLTFTSTIKHVIQTQHEDP-VYRKPYKYPQSVDQEV 296
Query: 329 RDIVNELLEHKIIRESKSPFASPIIIVKKK---NGKD--RMCVDYRELNRNTVRDHYPLP 493
+ E++E I+R+SKSP+ SPI +V KK +GK R+ VDYR LN TV D +P+P
Sbjct: 297 NKQIKEMIEQGIVRKSKSPYCSPIWVVPKKADASGKQKFRLVVDYRNLNEITVNDKFPIP 356
Query: 494 IISDQIDQLAGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
+ + +D+L YFTTID+A GFHQI + E SI KTAF T G YEY MPFGL
Sbjct: 357 RMDEILDKLGRCQYFTTIDLAKGFHQIQMDENSIAKTAFSTKHGHYEYTRMPFGL 411
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 117 bits (282), Expect = 2e-26
Identities = 63/170 (37%), Positives = 99/170 (58%), Gaps = 6/170 (3%)
Frame = +2
Query: 167 SELKILLNKFEHLFIHGYPHTRVNTGELEIRLKDESKT-VERRPYRLSPVERGKVRDIVN 343
S + L+ KFEH+F T E++ R+ ++ + + Y+ + + +V +
Sbjct: 95 SSINELIQKFEHIFYKEGQDLSF-TSEIKHRIITKNDLPIYSKTYKYPEIHKDEVNRQIA 153
Query: 344 ELLEHKIIRESKSPFASPIIIVKKK-----NGKDRMCVDYRELNRNTVRDHYPLPIISDQ 508
E+L+ IIR SKSP+ SP+ +V+KK K R+ VDYR+LN+ T+ D +P+P I +
Sbjct: 154 EMLDQGIIRHSKSPYNSPLWVVQKKMDQSNKQKWRLVVDYRKLNKETIEDRFPIPNIDEI 213
Query: 509 IDQLAGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
D+L F+T+D+A GF+QI + + KTAF T G YE+L MPFGL
Sbjct: 214 FDKLGDCKIFSTLDLAKGFYQIEMDNKDVHKTAFSTTSGHYEFLRMPFGL 263
>AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated pol
protein protein.
Length = 407
Score = 117 bits (281), Expect = 3e-26
Identities = 55/131 (41%), Positives = 85/131 (64%), Gaps = 5/131 (3%)
Frame = +2
Query: 281 VERRPYRLSPVERGKVRDIVNELLEHKIIRESKSPFASPIIIVKKKNG-----KDRMCVD 445
+ + YR V + +VR ++++LE II+ S SP+++P+ +V KK+ K R+ +D
Sbjct: 185 IHTKSYRYPFVHKDEVRKQISKMLEQNIIKNSHSPWSAPVWVVPKKSDNIGEKKWRLVID 244
Query: 446 YRELNRNTVRDHYPLPIISDQIDQLAGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDG 625
+R+LN TV D YP+P I+D +D + +YFTTID+A+GFHQI ++ KTAF +G
Sbjct: 245 FRKLNEKTVSDRYPIPNIADILDSIGKTMYFTTIDLASGFHQIQMNPRDASKTAFTVENG 304
Query: 626 LYEYLTMPFGL 658
YE+ MPFGL
Sbjct: 305 HYEFTRMPFGL 315
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 115 bits (277), Expect = 8e-26
Identities = 71/169 (42%), Positives = 97/169 (57%), Gaps = 7/169 (4%)
Frame = +2
Query: 173 LKILLNKFEHLFIHGYPHTRVNTG-ELEIRLKDESKTVERR-PYRLSPVERGKVRDIVNE 346
L LL +F +F V T + EIR + + PY ++ RG+V ++E
Sbjct: 88 LNSLLGEFPRIFEPPLSGMSVETAVKAEIRTNTQDPIYAKSYPYPVNM--RGEVERQIDE 145
Query: 347 LLEHKIIRESKSPFASPIIIVKKK---NGKD--RMCVDYRELNRNTVRDHYPLPIISDQI 511
LL+ IIR S SP+ SPI IV KK NG+ RM VD++ LN T+ D YP+P I+ +
Sbjct: 146 LLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATL 205
Query: 512 DQLAGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
L YFTT+D+ +GFHQI + E I KTAF T +G YE+L +PFGL
Sbjct: 206 ASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGL 254
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 115 bits (276), Expect = 1e-25
Identities = 68/174 (39%), Positives = 90/174 (51%), Gaps = 5/174 (2%)
Frame = +2
Query: 152 NDNQISELKILLNKFEHLFIHGYPHTRVNTGELEIRLKDESKTVERRPYRLSPVERGKVR 331
N + +L LL +F+ + H E + V + Y +V
Sbjct: 127 NAEEKYKLTNLLTRFKDIQFHEGDKLSFTNQEKHTINTTHNIPVYSKMYSFQQSYEQEVE 186
Query: 332 DIVNELLEHKIIRESKSPFASPIIIVKKK-----NGKDRMCVDYRELNRNTVRDHYPLPI 496
+ E+LE IIRES SP+ SPI +V KK K R+ +DYR+LN T+ D YP+P
Sbjct: 187 RQIQEMLEQGIIRESSSPYCSPIWVVPKKLDASGQQKLRIVIDYRKLNEITINDRYPMPN 246
Query: 497 ISDQIDQLAGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
I + + +L YFTTID+A GFHQI + SI KTAF T G YEY MPFGL
Sbjct: 247 IDEILGKLGRSNYFTTIDLAKGFHQIEMDSESIAKTAFSTKYGHYEYTRMPFGL 300
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 114 bits (275), Expect = 1e-25
Identities = 63/175 (36%), Positives = 98/175 (56%), Gaps = 6/175 (3%)
Frame = +2
Query: 152 NDNQISELKILLNKFEHLFIHGY-PHTRVNTGELEIRLKDESKTVERRPYRLSPVERGKV 328
N + + L L +F +F + P T N I D + + + YR V + +V
Sbjct: 274 NPEEKTALTTLCKQFRDIFYNPETPLTFTNKITHSIPTIDNTP-IHTKSYRYPFVHKTEV 332
Query: 329 RDIVNELLEHKIIRESKSPFASPIIIVKKK-----NGKDRMCVDYRELNRNTVRDHYPLP 493
+ + +L+ +IIR S SP+++P+ +V KK N K R+ +DYR+LN T+ D YP+P
Sbjct: 333 KKQIESMLDQQIIRSSHSPWSAPVWVVPKKLDGTGNRKWRLVIDYRKLNDKTISDRYPIP 392
Query: 494 IISDQIDQLAGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
I+D +D + YF+T+D+ +GFHQI ++ I KTAF G YE+ MPFGL
Sbjct: 393 NINDILDSIGKAKYFSTLDLTSGFHQIEMNPKDIAKTAFTVEGGHYEFTRMPFGL 447
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 110 bits (265), Expect = 2e-24
Identities = 53/140 (37%), Positives = 86/140 (61%), Gaps = 5/140 (3%)
Frame = +2
Query: 254 IRLKDESKTVERRPYRLSPVERGKVRDIVNELLEHKIIRESKSPFASPIIIVKKK----- 418
I+ D++ + + YR + + +V+ + +L II+ S SP+++P+ +V KK
Sbjct: 195 IKTTDDTP-IHTKSYRYPYIHKEEVKKQIEAMLNQDIIKSSYSPWSAPVWVVPKKITPTG 253
Query: 419 NGKDRMCVDYRELNRNTVRDHYPLPIISDQIDQLAGGIYFTTIDMAAGFHQIPISEGSIE 598
K R+ +DYR+LN T+ D YP+P I+D +D+L YF+T+D+A+GFHQI ++
Sbjct: 254 EQKWRLVIDYRKLNEKTISDRYPIPNIADILDRLGKAKYFSTLDLASGFHQIEMNPDDTP 313
Query: 599 KTAFVTPDGLYEYLTMPFGL 658
KTAF G YE++ MPFGL
Sbjct: 314 KTAFTVEGGHYEFIRMPFGL 333
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 110 bits (264), Expect = 3e-24
Identities = 59/171 (34%), Positives = 104/171 (60%), Gaps = 7/171 (4%)
Frame = +2
Query: 167 SELKILLNKFEHLF-IHGYPHTRVNTGELEIRLKDESKTVERRPYRLSPVERGKVRDIVN 343
S+L+ + +++ +F + P T N + ++RLKD+ + V + YR + +++ V
Sbjct: 277 SQLENICSEYIDIFALESEPITVNNLYKQQLRLKDD-EPVYTKNYRSPHSQVEEIQAQVQ 335
Query: 344 ELLEHKIIRESKSPFASPIIIVKKKNG------KDRMCVDYRELNRNTVRDHYPLPIISD 505
+L++ KI+ S S + SP+++V KK+ K R+ +DYR++N+ + D +PLP I D
Sbjct: 336 KLIKDKIVEPSVSQYNSPLLLVPKKSSPNSDKKKWRLVIDYRQINKKLLADKFPLPRIDD 395
Query: 506 QIDQLAGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
+DQL YF+ +D+ +GFHQI + EGS + T+F T +G Y + +PFGL
Sbjct: 396 ILDQLGRAKYFSCLDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGL 446
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 110 bits (264), Expect = 3e-24
Identities = 59/171 (34%), Positives = 104/171 (60%), Gaps = 7/171 (4%)
Frame = +2
Query: 167 SELKILLNKFEHLF-IHGYPHTRVNTGELEIRLKDESKTVERRPYRLSPVERGKVRDIVN 343
S+L+ + +++ +F + P T N + ++RLKD+ + V + YR + +++ V
Sbjct: 40 SQLENICSEYIDIFALESEPITVNNLYKQQLRLKDD-EPVYTKNYRSPHSQVEEIQAQVQ 98
Query: 344 ELLEHKIIRESKSPFASPIIIVKKKNG------KDRMCVDYRELNRNTVRDHYPLPIISD 505
+L++ KI+ S S + SP+++V KK+ K R+ +DYR++N+ + D +PLP I D
Sbjct: 99 KLIKDKIVEPSVSQYNSPLLLVPKKSSPNSDKKKWRLVIDYRQINKKLLADKFPLPRIDD 158
Query: 506 QIDQLAGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
+DQL YF+ +D+ +GFHQI + EGS + T+F T +G Y + +PFGL
Sbjct: 159 ILDQLGRAKYFSCLDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGL 209
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 109 bits (263), Expect = 4e-24
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 6/175 (3%)
Frame = +2
Query: 152 NDNQISELKILLNKFEHLFIH-GYPHTRVNTGELEIRLKDESKTVERRPYRLSPVERGKV 328
N+ + L LL K+ + H G T N + I K + Y +V
Sbjct: 166 NNEEKQRLCALLQKYHDIQYHEGDKLTFTNQTKHTINTKHNLPLYSK--YSYPQAYEQEV 223
Query: 329 RDIVNELLEHKIIRESKSPFASPIIIVKKK---NGKD--RMCVDYRELNRNTVRDHYPLP 493
+ ++L IIR S SP+ SPI +V KK +GK R+ +DYR+LN TV D +P+P
Sbjct: 224 ESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIP 283
Query: 494 IISDQIDQLAGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
+ + + +L YFTTID+A GFHQI + S+ KTAF T G YEYL MPFGL
Sbjct: 284 NMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGL 338
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p
protein.
Length = 1026
Score = 107 bits (256), Expect = 3e-23
Identities = 52/119 (43%), Positives = 77/119 (64%)
Frame = +2
Query: 299 RLSPVERGKVRDIVNELLEHKIIRESKSPFASPIIIVKKKNGKDRMCVDYRELNRNTVRD 478
RLS E V+ V E +E I+R+S S AS I++VKKK+G R+CVDYR+LN + D
Sbjct: 189 RLSEEEAIAVKKQVEEWVEQSIVRKSTSNVASRIVVVKKKDGTLRVCVDYRKLNTMVLMD 248
Query: 479 HYPLPIISDQIDQLAGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFG 655
+P+PI+ + +++L +FTT+D+ GF + + E S TAFVT +GL+E+ PFG
Sbjct: 249 CFPVPIMEEVLEKLQSAKWFTTMDLQNGFFHVAVEEASKPYTAFVTREGLFEFNKAPFG 307
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 105 bits (253), Expect = 6e-23
Identities = 51/119 (42%), Positives = 77/119 (64%)
Frame = +2
Query: 299 RLSPVERGKVRDIVNELLEHKIIRESKSPFASPIIIVKKKNGKDRMCVDYRELNRNTVRD 478
RLS E V+ V E +E I+R+S S AS I++V+KK+G R+CVDYR+LN + D
Sbjct: 495 RLSEEEAIAVKKQVEEWVEQSIVRKSTSNVASRIVVVRKKDGTLRVCVDYRKLNTMVLMD 554
Query: 479 HYPLPIISDQIDQLAGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFG 655
+P+PI+ + +++L +FTT+D+ GF + + E S TAFVT +GL+E+ PFG
Sbjct: 555 CFPVPIMEEVLEKLQSAKWFTTMDLQNGFFHVAVEEASKPYTAFVTREGLFEFNKAPFG 613
>AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein
protein.
Length = 437
Score = 105 bits (253), Expect = 6e-23
Identities = 60/143 (41%), Positives = 86/143 (60%), Gaps = 5/143 (3%)
Frame = +2
Query: 317 RGKVRDIVNELLEHKIIRESKSPFASPIIIVKKK---NGKD--RMCVDYRELNRNTVRDH 481
+ +V ++ELL IIR S+SP+ SP+ IV KK +GK R+ +DYR+LN TV D
Sbjct: 51 KDEVHKQISELLHDGIIRPSRSPYNSPVWIVPKKLDSSGKKKYRVVIDYRKLNMVTVADR 110
Query: 482 YPLPIISDQIDQLAGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGLC 661
YP+P I++ + QL F+ +D+ +GFHQI + E IEKTAF +G YE+ +PFGL
Sbjct: 111 YPIPDINEVLAQLGDNKIFSVLDLKSGFHQILLKESDIEKTAFSINNGKYEFTRLPFGLK 170
Query: 662 TRCQSTSAALIGLSLISRAHQTK 730
AL G S SR ++ +
Sbjct: 171 NAPSIFQRALDGYS--SRTYRVR 191
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1013
Score = 105 bits (252), Expect = 8e-23
Identities = 61/140 (43%), Positives = 85/140 (60%), Gaps = 12/140 (8%)
Frame = +2
Query: 275 KTVERRPY--RLSPVERGKVRDIVN----ELLEHKIIRESKSPFASPIIIVKKK------ 418
+TV+ P +L P G D VN ELL++ II++SKSP+ +PI +V KK
Sbjct: 152 RTVDEEPIYAKLYPYPMGAA-DFVNGEIQELLKNGIIQKSKSPYNNPIWVVDKKGTDDAG 210
Query: 419 NGKDRMCVDYRELNRNTVRDHYPLPIISDQIDQLAGGIYFTTIDMAAGFHQIPISEGSIE 598
N K R+ +D+R+LN TV D YP+P IS + L YFTT+D+ +G+HQI ++E E
Sbjct: 211 NKKMRLVLDFRKLNERTVPDRYPMPNISMILGNLGKAKYFTTLDLKSGYHQITLAERDRE 270
Query: 599 KTAFVTPDGLYEYLTMPFGL 658
KTAF G YE+ +PFGL
Sbjct: 271 KTAFAVNGGKYEFRRLPFGL 290
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 104 bits (250), Expect = 1e-22
Identities = 54/119 (45%), Positives = 77/119 (64%), Gaps = 5/119 (4%)
Frame = +2
Query: 317 RGKVRDIVNELLEHKIIRESKSPFASPIIIVKKK---NGKD--RMCVDYRELNRNTVRDH 481
+ +V ++ELL IIR S+SP+ SP+ IV KK +GK R+ +DYR+LN TV D
Sbjct: 208 KDEVHKQISELLHDGIIRPSRSPYNSPVWIVPKKLDSSGKKKYRVVIDYRKLNMVTVADR 267
Query: 482 YPLPIISDQIDQLAGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
YP+P I++ + QL F+ +D+ +GFHQI + E IEKTAF +G YE+ +PFGL
Sbjct: 268 YPIPDINEVLAQLGDNKIFSVLDLKSGFHQILLKESDIEKTAFSINNGKYEFTRLPFGL 326
>AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p
protein.
Length = 825
Score = 101 bits (241), Expect = 2e-21
Identities = 50/142 (35%), Positives = 85/142 (59%), Gaps = 6/142 (4%)
Frame = +2
Query: 251 EIRLKDESKTVERRPYRLSPVERGKVRDIVNELLEHKIIRESKSPFASPIIIVKKKNGKD 430
+IRL+D+ + + YR ++ ++ V +L+E KI+ + S + SP+++V KK+ D
Sbjct: 200 KIRLRDDEPSYIKN-YRTPHSQQAEISRQVTKLIEDKIVEPAVSEYNSPLLLVPKKSLPD 258
Query: 431 ------RMCVDYRELNRNTVRDHYPLPIISDQIDQLAGGIYFTTIDMAAGFHQIPISEGS 592
R+ +DYR++N+ + D +PLP I D +DQL YF+ +D+ +GFHQI + E S
Sbjct: 259 SKEKKWRLVIDYRQINKKLLADKFPLPRIDDILDQLGRAKYFSCLDLMSGFHQIELEEDS 318
Query: 593 IEKTAFVTPDGLYEYLTMPFGL 658
T+F T G Y + +P+GL
Sbjct: 319 RNITSFSTSSGSYRFTRLPYGL 340
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 97.5 bits (232), Expect = 2e-20
Identities = 55/171 (32%), Positives = 98/171 (57%), Gaps = 7/171 (4%)
Frame = +2
Query: 167 SELKILLNKFEHLF-IHGYPHTRVNTGELEIRLKDESKTVERRPYRLSPVERGKVRDIVN 343
+EL L +F +F + P + N + ++RL E V + YR++ ++ ++ V
Sbjct: 32 NELTKLCTEFSDIFGLETEPISANNFYKQKLRL-GEKTPVYIKNYRMADSQKPEIARQVK 90
Query: 344 ELLEHKIIRESKSPFASPIIIVKKK---NGKD---RMCVDYRELNRNTVRDHYPLPIISD 505
+L++ I+ S S + SP+++V KK N + R+ VDYR++N+ + D +PLP I D
Sbjct: 91 KLIDDGIVEPSMSEYNSPLLLVPKKPLPNSTEKRWRLAVDYRQINKKLLSDKFPLPRIED 150
Query: 506 QIDQLAGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
+DQL YF+ +D+ +GFHQI + + + T+F T +G Y + +P+GL
Sbjct: 151 ILDQLGRAKYFSCLDLMSGFHQIELEKRYRDITSFSTANGSYRFTRLPYGL 201
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 96.7 bits (230), Expect = 4e-20
Identities = 71/229 (31%), Positives = 118/229 (51%), Gaps = 13/229 (5%)
Frame = +2
Query: 11 LIGINLIENTNLSVVVNSRGAMLVHQ-PIIYHMRSQSPKFGKLDCDLTNDNQIS-ELKIL 184
+IG++L++ N ++ ++ + ++ I +R S F ++ ++ NQIS + +
Sbjct: 97 IIGLDLLKQGNATLDFKNKTLNINNEVESIQFLRCDSVNFANIE-NIVVPNQISNKFHTM 155
Query: 185 LNKFEHLFIHGYPHTRVNTGELE-IRLKDESKTVERRPYRLSPVERGKVRDIVNE----L 349
L +F NT + IR +D+ + L P G V D VN+ L
Sbjct: 156 LRNRLAVFAEPEEALPYNTNIVATIRTEDDQPIYSK----LYPYPMG-VSDFVNKETHAL 210
Query: 350 LEHKIIRESKSPFASPIIIVKKK------NGKDRMCVDYRELNRNTVRDHYPLPIISDQI 511
L+ IIR S SP+ +P+ +V KK N K R+ +D+R+LN T+ D YP+P + +
Sbjct: 211 LKDGIIRPSSSPYNNPVWVVDKKGTDEEGNTKKRLVIDFRKLNLKTIDDKYPIPNVVWIL 270
Query: 512 DQLAGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
L +FTT+D+ + FHQI ++E KTAF +G YE+ +PFGL
Sbjct: 271 SNLGKARFFTTLDLKSAFHQILLAEKDRAKTAFSVGNGKYEFCRLPFGL 319
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 96.3 bits (229), Expect = 5e-20
Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 9/225 (4%)
Frame = +2
Query: 11 LIGINLIENTNLSVVVNSRGAMLVHQPI---IYHMRSQSPKFGKLDCDLTNDNQISELKI 181
+IG++L+ T V +N L +Q I +++ S F ++ + D+ E K
Sbjct: 71 IIGLDLL--TQAGVKLNLAEDSLEYQGIAEKLHYFSCPSVNFTDVNDIVVPDSVKKEFKD 128
Query: 182 LLNKFEHLFIHGYPHTRVNTGELEIRLKDESKTVERRPYRLSPVERGKVRDIVNELLEHK 361
+ + + F NT +++ V R Y V + V +LL+
Sbjct: 129 TIIRRKKAFSTTNEALPFNTAVTATIRTVDNEPVYSRAYPTLMGVSDFVNNEVKQLLKDG 188
Query: 362 IIRESKSPFASPIIIVKKK------NGKDRMCVDYRELNRNTVRDHYPLPIISDQIDQLA 523
IIR S+SP+ SP +V KK N R+ +D+R+LN T+ D YP+P I + L
Sbjct: 189 IIRPSRSPYNSPTWVVDKKGTDASGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANLG 248
Query: 524 GGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
+FTT+D+ +G+HQI ++E EKT+F G YE+ +PFGL
Sbjct: 249 KAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGL 293
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 96.3 bits (229), Expect = 5e-20
Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 9/225 (4%)
Frame = +2
Query: 11 LIGINLIENTNLSVVVNSRGAMLVHQPI---IYHMRSQSPKFGKLDCDLTNDNQISELKI 181
+IG++L+ T V +N L +Q I +++ S F ++ + D+ E K
Sbjct: 66 IIGLDLL--TQAGVKLNLAEDSLEYQGIAEKLHYFSCPSVNFTDVNDIVVPDSVKKEFKD 123
Query: 182 LLNKFEHLFIHGYPHTRVNTGELEIRLKDESKTVERRPYRLSPVERGKVRDIVNELLEHK 361
+ + + F NT +++ V R Y V + V +LL+
Sbjct: 124 TIIRRKKAFSTTNEALPFNTAVTATIRTVDNEPVYSRAYPTLMGVSDFVNNEVKQLLKDG 183
Query: 362 IIRESKSPFASPIIIVKKK------NGKDRMCVDYRELNRNTVRDHYPLPIISDQIDQLA 523
IIR S+SP+ SP +V KK N R+ +D+R+LN T+ D YP+P I + L
Sbjct: 184 IIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANLG 243
Query: 524 GGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
+FTT+D+ +G+HQI ++E EKT+F G YE+ +PFGL
Sbjct: 244 KAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGL 288
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 96.3 bits (229), Expect = 5e-20
Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 9/225 (4%)
Frame = +2
Query: 11 LIGINLIENTNLSVVVNSRGAMLVHQPI---IYHMRSQSPKFGKLDCDLTNDNQISELKI 181
+IG++L+ T V +N L +Q I +++ S F ++ + D+ E K
Sbjct: 101 IIGLDLL--TQAGVKLNLAEDSLEYQGIAEKLHYFSCPSVNFTDVNDIVVPDSVKKEFKD 158
Query: 182 LLNKFEHLFIHGYPHTRVNTGELEIRLKDESKTVERRPYRLSPVERGKVRDIVNELLEHK 361
+ + + F NT +++ V R Y V + V +LL+
Sbjct: 159 TIIRRKKAFSTTNEALPFNTAVTATIRTVDNEPVYSRAYPTLMGVSDFVNNEVKQLLKDG 218
Query: 362 IIRESKSPFASPIIIVKKK------NGKDRMCVDYRELNRNTVRDHYPLPIISDQIDQLA 523
IIR S+SP+ SP +V KK N R+ +D+R+LN T+ D YP+P I + L
Sbjct: 219 IIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANLG 278
Query: 524 GGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
+FTT+D+ +G+HQI ++E EKT+F G YE+ +PFGL
Sbjct: 279 KAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGL 323
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 96.3 bits (229), Expect = 5e-20
Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 9/225 (4%)
Frame = +2
Query: 11 LIGINLIENTNLSVVVNSRGAMLVHQPI---IYHMRSQSPKFGKLDCDLTNDNQISELKI 181
+IG++L+ T V +N L +Q I +++ S F ++ + D+ E K
Sbjct: 101 IIGLDLL--TQAGVKLNLAEDSLEYQGIAEKLHYFSCPSVNFTDVNDIVVPDSVKKEFKD 158
Query: 182 LLNKFEHLFIHGYPHTRVNTGELEIRLKDESKTVERRPYRLSPVERGKVRDIVNELLEHK 361
+ + + F NT +++ V R Y V + V +LL+
Sbjct: 159 TIIRRKKAFSTTNEALPFNTAVTATIRTVDNEPVYSRAYPTLMGVSDFVNNEVKQLLKDG 218
Query: 362 IIRESKSPFASPIIIVKKK------NGKDRMCVDYRELNRNTVRDHYPLPIISDQIDQLA 523
IIR S+SP+ SP +V KK N R+ +D+R+LN T+ D YP+P I + L
Sbjct: 219 IIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANLG 278
Query: 524 GGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
+FTT+D+ +G+HQI ++E EKT+F G YE+ +PFGL
Sbjct: 279 KAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGL 323
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 96.3 bits (229), Expect = 5e-20
Identities = 71/226 (31%), Positives = 110/226 (48%), Gaps = 10/226 (4%)
Frame = +2
Query: 11 LIGINLIENTNLSVVVNSRGAMLVHQPI---IYHMRSQSPKFGKLDCDLTNDNQISELKI 181
+IG++L+ T V +N L +Q I +++ S F ++ + D+ E K
Sbjct: 66 IIGLDLL--TQAGVKLNLAEDSLEYQGIAEKLHYFSCPSVNFTDVNDIVVPDSVKKEFKD 123
Query: 182 LLNKFEHLFIHGYPHTRVNTG-ELEIRLKDESKTVERRPYRLSPVERGKVRDIVNELLEH 358
+ + + F NT IR D R L V V + V +LL+
Sbjct: 124 TIIRRKKAFSTTNEALPFNTAVTATIRTVDNEPVYSRAYPNLMGVS-DFVNNEVKQLLKD 182
Query: 359 KIIRESKSPFASPIIIVKKK------NGKDRMCVDYRELNRNTVRDHYPLPIISDQIDQL 520
IIR S+SP+ SP +V KK N R+ +D+R+LN T+ D YP+P I + L
Sbjct: 183 GIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNERTIPDRYPMPSIPMILANL 242
Query: 521 AGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
+FTT+D+ +G+HQI ++E EKT+F G YE+ +PFGL
Sbjct: 243 GKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGL 288
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 96.3 bits (229), Expect = 5e-20
Identities = 71/226 (31%), Positives = 110/226 (48%), Gaps = 10/226 (4%)
Frame = +2
Query: 11 LIGINLIENTNLSVVVNSRGAMLVHQPI---IYHMRSQSPKFGKLDCDLTNDNQISELKI 181
+IG++L+ T V +N L +Q I +++ S F ++ + D+ E K
Sbjct: 66 IIGLDLL--TQAGVKLNLAEDSLEYQGIAEKLHYFSCPSVNFTDVNDIVVPDSVKKEFKD 123
Query: 182 LLNKFEHLFIHGYPHTRVNTG-ELEIRLKDESKTVERRPYRLSPVERGKVRDIVNELLEH 358
+ + + F NT IR D R L V V + V +LL+
Sbjct: 124 TIIRRKKAFSTTNEALPFNTAVTATIRTVDNEPVYSRAYPNLMGVS-DFVNNEVKQLLKD 182
Query: 359 KIIRESKSPFASPIIIVKKK------NGKDRMCVDYRELNRNTVRDHYPLPIISDQIDQL 520
IIR S+SP+ SP +V KK N R+ +D+R+LN T+ D YP+P I + L
Sbjct: 183 GIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNERTIPDRYPMPSIPMILANL 242
Query: 521 AGGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
+FTT+D+ +G+HQI ++E EKT+F G YE+ +PFGL
Sbjct: 243 GKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGL 288
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 96.3 bits (229), Expect = 5e-20
Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 9/225 (4%)
Frame = +2
Query: 11 LIGINLIENTNLSVVVNSRGAMLVHQPI---IYHMRSQSPKFGKLDCDLTNDNQISELKI 181
+IG++L+ T V +N L +Q I +++ S F ++ + D+ E K
Sbjct: 519 IIGLDLL--TQAGVKLNLAEDSLEYQGIAEKLHYFSCPSVNFTDVNDIVVPDSVKKEFKD 576
Query: 182 LLNKFEHLFIHGYPHTRVNTGELEIRLKDESKTVERRPYRLSPVERGKVRDIVNELLEHK 361
+ + + F NT +++ V R Y V + V +LL+
Sbjct: 577 TIIRRKKAFSTTNEALPFNTAVTATIRTVDNEPVYSRAYPTLMGVSDFVNNEVKQLLKDG 636
Query: 362 IIRESKSPFASPIIIVKKK------NGKDRMCVDYRELNRNTVRDHYPLPIISDQIDQLA 523
IIR S+SP+ SP +V KK N R+ +D+R+LN T+ D YP+P I + L
Sbjct: 637 IIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANLG 696
Query: 524 GGIYFTTIDMAAGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
+FTT+D+ +G+HQI ++E EKT+F G YE+ +PFGL
Sbjct: 697 KAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGL 741
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 38.7 bits (86), Expect = 0.011
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 557 AGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
+GFHQI + E S T+F T +G Y + +PFGL
Sbjct: 2 SGFHQIELEENSRNITSFSTSNGSYRFTRLPFGL 35
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 38.7 bits (86), Expect = 0.011
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 557 AGFHQIPISEGSIEKTAFVTPDGLYEYLTMPFGL 658
+GFHQI + E S T+F T +G Y + +PFGL
Sbjct: 2 SGFHQIELEENSRNITSFSTSNGSYRFTRLPFGL 35
>AY051559-1|AAK92983.1| 721|Drosophila melanogaster GH20931p
protein.
Length = 721
Score = 29.9 bits (64), Expect = 4.9
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 128 GKLDC-DLTNDNQISELKILLNKFEHLFIHGYPHTRVNTGELEIRLKDESKTV 283
G LD DL+ N+I L +L HL HG H + + + I L+D++ V
Sbjct: 444 GLLDSQDLSTRNRILLLAQMLEAVNHLSRHGVAHRDLKSDNVLIELQDDAAPV 496
>AE014298-933|AAZ52502.1| 721|Drosophila melanogaster CG4523-PH,
isoform H protein.
Length = 721
Score = 29.9 bits (64), Expect = 4.9
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 128 GKLDC-DLTNDNQISELKILLNKFEHLFIHGYPHTRVNTGELEIRLKDESKTV 283
G LD DL+ N+I L +L HL HG H + + + I L+D++ V
Sbjct: 444 GLLDSQDLSTRNRILLLAQMLEAVNHLSRHGVAHRDLKSDNVLIELQDDAAPV 496
>AE014298-932|AAZ52501.1| 721|Drosophila melanogaster CG4523-PG,
isoform G protein.
Length = 721
Score = 29.9 bits (64), Expect = 4.9
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 128 GKLDC-DLTNDNQISELKILLNKFEHLFIHGYPHTRVNTGELEIRLKDESKTV 283
G LD DL+ N+I L +L HL HG H + + + I L+D++ V
Sbjct: 444 GLLDSQDLSTRNRILLLAQMLEAVNHLSRHGVAHRDLKSDNVLIELQDDAAPV 496
>AE014298-931|AAZ52500.1| 721|Drosophila melanogaster CG4523-PF,
isoform F protein.
Length = 721
Score = 29.9 bits (64), Expect = 4.9
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 128 GKLDC-DLTNDNQISELKILLNKFEHLFIHGYPHTRVNTGELEIRLKDESKTV 283
G LD DL+ N+I L +L HL HG H + + + I L+D++ V
Sbjct: 444 GLLDSQDLSTRNRILLLAQMLEAVNHLSRHGVAHRDLKSDNVLIELQDDAAPV 496
>AE014298-930|AAZ52499.1| 721|Drosophila melanogaster CG4523-PE,
isoform E protein.
Length = 721
Score = 29.9 bits (64), Expect = 4.9
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 128 GKLDC-DLTNDNQISELKILLNKFEHLFIHGYPHTRVNTGELEIRLKDESKTV 283
G LD DL+ N+I L +L HL HG H + + + I L+D++ V
Sbjct: 444 GLLDSQDLSTRNRILLLAQMLEAVNHLSRHGVAHRDLKSDNVLIELQDDAAPV 496
>AE014298-929|AAZ52498.1| 721|Drosophila melanogaster CG4523-PD,
isoform D protein.
Length = 721
Score = 29.9 bits (64), Expect = 4.9
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 128 GKLDC-DLTNDNQISELKILLNKFEHLFIHGYPHTRVNTGELEIRLKDESKTV 283
G LD DL+ N+I L +L HL HG H + + + I L+D++ V
Sbjct: 444 GLLDSQDLSTRNRILLLAQMLEAVNHLSRHGVAHRDLKSDNVLIELQDDAAPV 496
>AE014298-928|AAZ52497.1| 721|Drosophila melanogaster CG4523-PC,
isoform C protein.
Length = 721
Score = 29.9 bits (64), Expect = 4.9
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 128 GKLDC-DLTNDNQISELKILLNKFEHLFIHGYPHTRVNTGELEIRLKDESKTV 283
G LD DL+ N+I L +L HL HG H + + + I L+D++ V
Sbjct: 444 GLLDSQDLSTRNRILLLAQMLEAVNHLSRHGVAHRDLKSDNVLIELQDDAAPV 496
>AE014298-927|AAF46188.1| 721|Drosophila melanogaster CG4523-PB,
isoform B protein.
Length = 721
Score = 29.9 bits (64), Expect = 4.9
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 128 GKLDC-DLTNDNQISELKILLNKFEHLFIHGYPHTRVNTGELEIRLKDESKTV 283
G LD DL+ N+I L +L HL HG H + + + I L+D++ V
Sbjct: 444 GLLDSQDLSTRNRILLLAQMLEAVNHLSRHGVAHRDLKSDNVLIELQDDAAPV 496
>AE014298-926|AAN09178.1| 721|Drosophila melanogaster CG4523-PA,
isoform A protein.
Length = 721
Score = 29.9 bits (64), Expect = 4.9
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 128 GKLDC-DLTNDNQISELKILLNKFEHLFIHGYPHTRVNTGELEIRLKDESKTV 283
G LD DL+ N+I L +L HL HG H + + + I L+D++ V
Sbjct: 444 GLLDSQDLSTRNRILLLAQMLEAVNHLSRHGVAHRDLKSDNVLIELQDDAAPV 496
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,093,963
Number of Sequences: 53049
Number of extensions: 759088
Number of successful extensions: 1780
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1753
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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