Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_O22
         (897 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    24   2.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   3.8  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    23   5.0  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    23   5.0  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.6  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.6  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   8.7  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -3

Query: 736 IQIIGHFXWWECGSAFPSMIQVCHHSDEIRVDFILSCIALRD 611
           +QI+G     E G AFPS+  +   S    + F   C A+R+
Sbjct: 35  LQILGVSKQIETGLAFPSITLIVLGSIIFVISFFGCCGAIRE 76


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 287 QNIIFKNSKTGKVEQIS 337
           +NI+F +  TGKVE I+
Sbjct: 813 ENILFLDLSTGKVEMIT 829


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 450 CSPSLKPPYLCKVPFLRNKRK 388
           C     P  +C++ +LRNK+K
Sbjct: 63  CIKICAPGCVCRLGYLRNKKK 83


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 450 CSPSLKPPYLCKVPFLRNKRK 388
           C     P  +C++ +LRNK+K
Sbjct: 63  CIKICAPGCVCRLGYLRNKKK 83


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 135 FNLKEIYANFTLLHRVVKYCQITKHGV 215
           FNL E   N+     V ++ Q+ KHG+
Sbjct: 62  FNLVENLDNYNDKEAVNEFMQLLKHGM 88


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 135 FNLKEIYANFTLLHRVVKYCQITKHGV 215
           FNL E   N+     V ++ Q+ KHG+
Sbjct: 62  FNLVENLDNYNDKEAVNEFMQLLKHGM 88


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 139 LNNSFND*LVTVFYSV*RKTFHLLV 65
           +N+  N  + TVF    RK FH LV
Sbjct: 668 MNSFVNPVIYTVFNPEFRKAFHKLV 692


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,418
Number of Sequences: 438
Number of extensions: 4704
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)