Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_O18
(898 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 36 7e-04
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 35 9e-04
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 30 0.025
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 26 0.54
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 24 1.6
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 24 1.6
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 5.0
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 6.6
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 6.6
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 6.6
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 8.7
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 8.7
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 8.7
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 35.5 bits (78), Expect = 7e-04
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +3
Query: 159 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRLTDTRKDEQDRCI-TIK 335
M K++ N+ VI HVD GKST T L+ K G I + + K+ Q+ + K
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGI-----DKRTIEKFEKEAQEMGKGSFK 55
Query: 336 STAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 512
+ + E + + I + ++ K + + +ID+PGH DF + D A+
Sbjct: 56 YAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAV 113
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 35.1 bits (77), Expect = 9e-04
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +3
Query: 159 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRLTDTRKDEQDRCI-TIK 335
M K++ N+ VI HVD GKST T L+ K G I + + K+ Q+ + K
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGI-----DKRTIEKFEKEAQEMGKGSFK 55
Query: 336 STAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 512
+ + E + + I + ++ K + + +ID+PGH DF + D A+
Sbjct: 56 YAWVLDKLKAERERGITIDIALWKFETAK-YYVTIIDAPGHRDFIKNMITGTSQADCAV 113
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 30.3 bits (65), Expect = 0.025
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = +3
Query: 417 EKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPI 596
E G + +D+PGH F S +TD + QT + A ++ I
Sbjct: 190 ESGERVTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKEQTLQSIEMAKDAKVPII 249
Query: 597 LFMNKMDR 620
+ +NK+D+
Sbjct: 250 VAINKIDK 257
Score = 29.5 bits (63), Expect = 0.043
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 186 MSVIAHVDHGKSTLTDSL 239
++++ HVDHGK+TL D+L
Sbjct: 148 VTIMGHVDHGKTTLLDAL 165
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.8 bits (54), Expect = 0.54
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +3
Query: 183 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRLT---DTRKDEQDR 320
N+ I HV HGKST+ + +S + E +T DTR ++ R
Sbjct: 44 NIGTIGHVAHGKSTIVKA-ISGVQTVRFKNELERNITIKLDTRAEDSTR 91
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 426 FLINLIDSPGHVDFSSEVTAALRVTDGAL 512
+ + +ID+PGH DF + D A+
Sbjct: 12 YYVTIIDAPGHRDFIKNMITGTSQADCAV 40
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 426 FLINLIDSPGHVDFSSEVTAALRVTDGAL 512
+ + +ID+PGH DF + D A+
Sbjct: 28 YYVTIIDAPGHRDFIKNMITGTSQADCAV 56
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.6 bits (46), Expect = 5.0
Identities = 8/21 (38%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +3
Query: 48 PFSKRTPLLAYGSW-FNRTKI 107
PF ++T ++ +GSW FN ++
Sbjct: 159 PFDQQTCIMKFGSWTFNGDQV 179
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 6.6
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 48 PFSKRTPLLAYGSW 89
PF ++T +L +GSW
Sbjct: 161 PFDEQTCVLKFGSW 174
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 6.6
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = -3
Query: 566 TQYCFSLYTHTRHTVNNHKGSISDTECSCYFRREINVSR*VNQV 435
T C S Y +RH N + + CS RE R +Q+
Sbjct: 227 TSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKDRRYDQL 270
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.2 bits (45), Expect = 6.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 279 ETRLTDTRKDEQDRCITIKSTAISMFF 359
+ RL +T E C T+K +A+ M+F
Sbjct: 676 DARLRNTM--ENLTCATVKGSAVDMYF 700
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 8.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 345 ISMFFELEEKDLVFITNPDQREKSEKGFLI 434
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.8 bits (44), Expect = 8.7
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -1
Query: 529 TQSTTTRAP-SVTRSAAVTSEEKSTC 455
+ STTT +P + T+S V + STC
Sbjct: 324 SSSTTTTSPMTSTKSTIVRNHLNSTC 349
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 8.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 345 ISMFFELEEKDLVFITNPDQREKSEKGFLI 434
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,310
Number of Sequences: 438
Number of extensions: 4202
Number of successful extensions: 29
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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