Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_O14
(851 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated ... 264 3e-70
BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processi... 264 4e-70
AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens ... 264 4e-70
AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined b... 249 9e-66
BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein NOP5/... 83 1e-15
BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein prot... 83 1e-15
AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5 pro... 83 1e-15
AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein NOP5/... 83 1e-15
AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein. 83 1e-15
Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein. 77 8e-14
BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A pr... 77 8e-14
BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A (5... 77 8e-14
BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for IM... 77 8e-14
AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A (5... 77 8e-14
DQ374434-1|ABD37635.1| 38|Homo sapiens truncated pre-mRNA spli... 59 2e-08
>AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated 61
kDa protein protein.
Length = 499
Score = 264 bits (647), Expect = 3e-70
Identities = 130/210 (61%), Positives = 161/210 (76%)
Frame = +2
Query: 197 SIRELAKLRYSDRLKRVMSEIECNAGNNRNKVEVAGLMESDPEYQLIVEANNVAVEIDGE 376
S++ +AKL S +M +IE EV G +E+ PEY++IV+ANN+ VEI+ E
Sbjct: 47 SVKTIAKLWDSKMFAEIMMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENE 106
Query: 377 IAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGNDLDRAKNNEILQSFLTQATIMI 556
+ IIH+F+RDKY KRFPELESL+ L+YIRTVKELGN LD+ KNNE LQ LT ATIM+
Sbjct: 107 LNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNATIMV 166
Query: 557 VSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVESRMTFIAPNITAIVGAS 736
VSVTASTTQG+ LS+ ELE ++EACDMA ELN K +IYEYVESRM+FIAPN++ I+GAS
Sbjct: 167 VSVTASTTQGQQLSEEELERLDEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGAS 226
Query: 737 TAAKILGVAGGLSKLSKMPACXVXLSGXXR 826
TAAKI+GVAGGL+ LSKMPAC + L G R
Sbjct: 227 TAAKIMGVAGGLTNLSKMPACNIMLLGAQR 256
>BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processing
factor 31 homolog (S. cerevisiae) protein.
Length = 499
Score = 264 bits (646), Expect = 4e-70
Identities = 130/210 (61%), Positives = 160/210 (76%)
Frame = +2
Query: 197 SIRELAKLRYSDRLKRVMSEIECNAGNNRNKVEVAGLMESDPEYQLIVEANNVAVEIDGE 376
S++ +AKL S +M +IE EV G +E+ PEY++IV+ANN+ VEI+ E
Sbjct: 47 SVKTIAKLWDSKMFAEIMMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENE 106
Query: 377 IAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGNDLDRAKNNEILQSFLTQATIMI 556
+ IIH+F+RDKY KRFPELESL+ L+YIRTVKELGN LD+ KNNE LQ LT ATIM+
Sbjct: 107 LNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNATIMV 166
Query: 557 VSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVESRMTFIAPNITAIVGAS 736
VSVTASTTQG+ LS+ ELE + EACDMA ELN K +IYEYVESRM+FIAPN++ I+GAS
Sbjct: 167 VSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGAS 226
Query: 737 TAAKILGVAGGLSKLSKMPACXVXLSGXXR 826
TAAKI+GVAGGL+ LSKMPAC + L G R
Sbjct: 227 TAAKIMGVAGGLTNLSKMPACNIMLLGAQR 256
>AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens
cDNA FLJ25681 fis, clone TST04131. ).
Length = 364
Score = 264 bits (646), Expect = 4e-70
Identities = 130/210 (61%), Positives = 160/210 (76%)
Frame = +2
Query: 197 SIRELAKLRYSDRLKRVMSEIECNAGNNRNKVEVAGLMESDPEYQLIVEANNVAVEIDGE 376
S++ +AKL S +M +IE EV G +E+ PEY++IV+ANN+ VEI+ E
Sbjct: 47 SVKTIAKLWDSKMFAEIMMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENE 106
Query: 377 IAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGNDLDRAKNNEILQSFLTQATIMI 556
+ IIH+F+RDKY KRFPELESL+ L+YIRTVKELGN LD+ KNNE LQ LT ATIM+
Sbjct: 107 LNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNATIMV 166
Query: 557 VSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVESRMTFIAPNITAIVGAS 736
VSVTASTTQG+ LS+ ELE + EACDMA ELN K +IYEYVESRM+FIAPN++ I+GAS
Sbjct: 167 VSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGAS 226
Query: 737 TAAKILGVAGGLSKLSKMPACXVXLSGXXR 826
TAAKI+GVAGGL+ LSKMPAC + L G R
Sbjct: 227 TAAKIMGVAGGLTNLSKMPACNIMLLGAQR 256
>AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined
breast cancer antigen NY-BR-99 protein.
Length = 278
Score = 249 bits (610), Expect = 9e-66
Identities = 119/175 (68%), Positives = 144/175 (82%)
Frame = +2
Query: 302 GLMESDPEYQLIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKE 481
G +E+ PEY++IV+ANN+ VEI+ E+ IIH+F+RDKY KRFPELESL+ L+YIRTVKE
Sbjct: 2 GPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKE 61
Query: 482 LGNDLDRAKNNEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFK 661
LGN LD+ KNNE LQ LT ATIM+VSVTASTTQG+ LS+ ELE + EACDMA ELN K
Sbjct: 62 LGNSLDKCKNNENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASK 121
Query: 662 SQIYEYVESRMTFIAPNITAIVGASTAAKILGVAGGLSKLSKMPACXVXLSGXXR 826
+IYEYVESRM+FIAPN++ I+GASTAAKI+GV GGL+ LSKMPAC + L G R
Sbjct: 122 HRIYEYVESRMSFIAPNLSIIIGASTAAKIMGVGGGLTNLSKMPACNIMLLGAQR 176
>BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein
NOP5/NOP58 protein.
Length = 529
Score = 83.0 bits (196), Expect = 1e-15
Identities = 50/173 (28%), Positives = 89/173 (51%)
Frame = +2
Query: 332 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGNDLDRAKN 511
+IV+A ++ ++D E+ R+ Y FPEL +I L Y + ++++G+ + A
Sbjct: 161 MIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASA 220
Query: 512 NEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVESR 691
L L + V A + G +S+ ++ I C E++ +++Q+YEY+++R
Sbjct: 221 K--LSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNR 278
Query: 692 MTFIAPNITAIVGASTAAKILGVAGGLSKLSKMPACXVXLSGXXRXPVRLLAS 850
M IAPN+T +VG A+++ AG L L+K A V + G + R L S
Sbjct: 279 MMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKS 331
>BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein
protein.
Length = 522
Score = 83.0 bits (196), Expect = 1e-15
Identities = 50/173 (28%), Positives = 89/173 (51%)
Frame = +2
Query: 332 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGNDLDRAKN 511
+IV+A ++ ++D E+ R+ Y FPEL +I L Y + ++++G+ + A
Sbjct: 161 MIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASA 220
Query: 512 NEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVESR 691
L L + V A + G +S+ ++ I C E++ +++Q+YEY+++R
Sbjct: 221 K--LSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNR 278
Query: 692 MTFIAPNITAIVGASTAAKILGVAGGLSKLSKMPACXVXLSGXXRXPVRLLAS 850
M IAPN+T +VG A+++ AG L L+K A V + G + R L S
Sbjct: 279 MMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKS 331
>AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5
protein.
Length = 529
Score = 83.0 bits (196), Expect = 1e-15
Identities = 50/173 (28%), Positives = 89/173 (51%)
Frame = +2
Query: 332 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGNDLDRAKN 511
+IV+A ++ ++D E+ R+ Y FPEL +I L Y + ++++G+ + A
Sbjct: 161 MIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASA 220
Query: 512 NEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVESR 691
L L + V A + G +S+ ++ I C E++ +++Q+YEY+++R
Sbjct: 221 K--LSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNR 278
Query: 692 MTFIAPNITAIVGASTAAKILGVAGGLSKLSKMPACXVXLSGXXRXPVRLLAS 850
M IAPN+T +VG A+++ AG L L+K A V + G + R L S
Sbjct: 279 MMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKS 331
>AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein
NOP5/NOP58 protein.
Length = 529
Score = 83.0 bits (196), Expect = 1e-15
Identities = 50/173 (28%), Positives = 89/173 (51%)
Frame = +2
Query: 332 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGNDLDRAKN 511
+IV+A ++ ++D E+ R+ Y FPEL +I L Y + ++++G+ + A
Sbjct: 161 MIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASA 220
Query: 512 NEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVESR 691
L L + V A + G +S+ ++ I C E++ +++Q+YEY+++R
Sbjct: 221 K--LSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNR 278
Query: 692 MTFIAPNITAIVGASTAAKILGVAGGLSKLSKMPACXVXLSGXXRXPVRLLAS 850
M IAPN+T +VG A+++ AG L L+K A V + G + R L S
Sbjct: 279 MMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKS 331
>AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein.
Length = 529
Score = 83.0 bits (196), Expect = 1e-15
Identities = 50/173 (28%), Positives = 89/173 (51%)
Frame = +2
Query: 332 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGNDLDRAKN 511
+IV+A ++ ++D E+ R+ Y FPEL +I L Y + ++++G+ + A
Sbjct: 161 MIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASA 220
Query: 512 NEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVESR 691
L L + V A + G +S+ ++ I C E++ +++Q+YEY+++R
Sbjct: 221 K--LSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNR 278
Query: 692 MTFIAPNITAIVGASTAAKILGVAGGLSKLSKMPACXVXLSGXXRXPVRLLAS 850
M IAPN+T +VG A+++ AG L L+K A V + G + R L S
Sbjct: 279 MMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKS 331
>Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein.
Length = 602
Score = 77.0 bits (181), Expect = 8e-14
Identities = 43/173 (24%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Frame = +2
Query: 332 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGN--DLDRA 505
+I+++ ++ ++D +I VR+ Y FPEL +I Y R + +GN +L+
Sbjct: 173 MIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNED 232
Query: 506 KNNEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVE 685
K ++ + + A + + ++ G +S I+L I L+ ++ ++ Y+
Sbjct: 233 KLEKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLR 292
Query: 686 SRMTFIAPNITAIVGASTAAKILGVAGGLSKLSKMPACXVXLSGXXRXPVRLL 844
S+M+ +AP+++A++G + A+++ AG L+ L+K PA V + G + R L
Sbjct: 293 SKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRAL 345
>BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A
protein.
Length = 594
Score = 77.0 bits (181), Expect = 8e-14
Identities = 43/173 (24%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Frame = +2
Query: 332 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGN--DLDRA 505
+I+++ ++ ++D +I VR+ Y FPEL +I Y R + +GN +L+
Sbjct: 167 MIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNED 226
Query: 506 KNNEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVE 685
K ++ + + A + + ++ G +S I+L I L+ ++ ++ Y+
Sbjct: 227 KLEKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLR 286
Query: 686 SRMTFIAPNITAIVGASTAAKILGVAGGLSKLSKMPACXVXLSGXXRXPVRLL 844
S+M+ +AP+++A++G + A+++ AG L+ L+K PA V + G + R L
Sbjct: 287 SKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRAL 339
>BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 77.0 bits (181), Expect = 8e-14
Identities = 43/173 (24%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Frame = +2
Query: 332 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGN--DLDRA 505
+I+++ ++ ++D +I VR+ Y FPEL +I Y R + +GN +L+
Sbjct: 167 MIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNED 226
Query: 506 KNNEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVE 685
K ++ + + A + + ++ G +S I+L I L+ ++ ++ Y+
Sbjct: 227 KLEKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLR 286
Query: 686 SRMTFIAPNITAIVGASTAAKILGVAGGLSKLSKMPACXVXLSGXXRXPVRLL 844
S+M+ +AP+++A++G + A+++ AG L+ L+K PA V + G + R L
Sbjct: 287 SKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRAL 339
>BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for
IMAGE:4448930) protein.
Length = 447
Score = 77.0 bits (181), Expect = 8e-14
Identities = 43/173 (24%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Frame = +2
Query: 332 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGN--DLDRA 505
+I+++ ++ ++D +I VR+ Y FPEL +I Y R + +GN +L+
Sbjct: 163 MIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNED 222
Query: 506 KNNEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVE 685
K ++ + + A + + ++ G +S I+L I L+ ++ ++ Y+
Sbjct: 223 KLEKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLR 282
Query: 686 SRMTFIAPNITAIVGASTAAKILGVAGGLSKLSKMPACXVXLSGXXRXPVRLL 844
S+M+ +AP+++A++G + A+++ AG L+ L+K PA V + G + R L
Sbjct: 283 SKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRAL 335
>AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 77.0 bits (181), Expect = 8e-14
Identities = 43/173 (24%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Frame = +2
Query: 332 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGN--DLDRA 505
+I+++ ++ ++D +I VR+ Y FPEL +I Y R + +GN +L+
Sbjct: 167 MIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNED 226
Query: 506 KNNEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVE 685
K ++ + + A + + ++ G +S I+L I L+ ++ ++ Y+
Sbjct: 227 KLEKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLR 286
Query: 686 SRMTFIAPNITAIVGASTAAKILGVAGGLSKLSKMPACXVXLSGXXRXPVRLL 844
S+M+ +AP+++A++G + A+++ AG L+ L+K PA V + G + R L
Sbjct: 287 SKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRAL 339
>DQ374434-1|ABD37635.1| 38|Homo sapiens truncated pre-mRNA
splicing factor protein protein.
Length = 38
Score = 59.3 bits (137), Expect = 2e-08
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +2
Query: 479 ELGNDLDRAKNNEILQSFLTQATIMIVSVTASTTQG 586
ELGN LD+ KNNE LQ LT ATIM+VSVTASTTQG
Sbjct: 1 ELGNSLDKCKNNENLQQILTNATIMVVSVTASTTQG 36
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,404,234
Number of Sequences: 237096
Number of extensions: 1677258
Number of successful extensions: 3540
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3540
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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