Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_O09
         (847 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021728-3|CAA16820.1| 1042|Drosophila melanogaster EG:95B7.8,FB...    31   1.5  
AF141673-1|AAD32687.1| 1042|Drosophila melanogaster fs(1)YB prot...    31   1.5  
AE014298-454|AAF45815.1| 1042|Drosophila melanogaster CG2706-PA ...    31   1.5  
BT011042-1|AAR31113.1|  856|Drosophila melanogaster SD02665p pro...    31   2.0  
AF353512-1|AAK58866.1|  856|Drosophila melanogaster regular prot...    31   2.0  
AE013599-673|AAF59069.2|  856|Drosophila melanogaster CG8643-PA ...    31   2.0  
BT023033-1|AAY55449.1|  186|Drosophila melanogaster IP04035p pro...    30   3.5  
AE013599-2059|AAF58136.1|  165|Drosophila melanogaster CG12959-P...    30   3.5  
BT025842-1|ABF85742.1|  818|Drosophila melanogaster IP12350p pro...    30   4.6  
BT024328-1|ABC86390.1|  593|Drosophila melanogaster IP10742p pro...    30   4.6  
BT022956-1|AAY55372.1|  148|Drosophila melanogaster IP04235p pro...    30   4.6  
AY061331-1|AAL28879.1|  403|Drosophila melanogaster LD25702p pro...    29   6.1  
AE014296-1025|AAF50735.1|  525|Drosophila melanogaster CG10489-P...    29   6.1  
AB102715-1|BAD10843.1|  403|Drosophila melanogaster DNA polymera...    29   6.1  

>AL021728-3|CAA16820.1| 1042|Drosophila melanogaster
           EG:95B7.8,FBgn0000928;fs(1)Yb protein.
          Length = 1042

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
 Frame = +3

Query: 504 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 671
           K++ I  +  +  V L + FE  S     VD   PAA   +    SPFVT  PT+ L  E
Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279

Query: 672 FETVYGAVELTHLTPPQS-PPGPATQL 749
           F+ +  + ++ ++    + PP P+  +
Sbjct: 280 FQELVKSFKVQNVFKNMNLPPPPSVSI 306


>AF141673-1|AAD32687.1| 1042|Drosophila melanogaster fs(1)YB
           protein.
          Length = 1042

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
 Frame = +3

Query: 504 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 671
           K++ I  +  +  V L + FE  S     VD   PAA   +    SPFVT  PT+ L  E
Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279

Query: 672 FETVYGAVELTHLTPPQS-PPGPATQL 749
           F+ +  + ++ ++    + PP P+  +
Sbjct: 280 FQELVKSFKVQNVFKNMNLPPPPSVSI 306


>AE014298-454|AAF45815.1| 1042|Drosophila melanogaster CG2706-PA
           protein.
          Length = 1042

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
 Frame = +3

Query: 504 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 671
           K++ I  +  +  V L + FE  S     VD   PAA   +    SPFVT  PT+ L  E
Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279

Query: 672 FETVYGAVELTHLTPPQS-PPGPATQL 749
           F+ +  + ++ ++    + PP P+  +
Sbjct: 280 FQELVKSFKVQNVFKNMNLPPPPSVSI 306


>BT011042-1|AAR31113.1|  856|Drosophila melanogaster SD02665p
           protein.
          Length = 856

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 22/68 (32%), Positives = 31/68 (45%)
 Frame = +3

Query: 540 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPP 719
           ++DL  + EN    P    P PP+A ++      S P    L  F  ++  V +T  TP 
Sbjct: 134 EIDLVYVVEN----PLPPSP-PPSADISVDELPGSSPQSFDLDPFAVLHEVVTMTPPTPI 188

Query: 720 QSPPGPAT 743
             PPGP T
Sbjct: 189 APPPGPPT 196


>AF353512-1|AAK58866.1|  856|Drosophila melanogaster regular
           protein.
          Length = 856

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 22/68 (32%), Positives = 31/68 (45%)
 Frame = +3

Query: 540 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPP 719
           ++DL  + EN    P    P PP+A ++      S P    L  F  ++  V +T  TP 
Sbjct: 134 EIDLVYVVEN----PLPPSP-PPSADISVDELPGSSPQSFDLDPFAVLHEVVTMTPPTPI 188

Query: 720 QSPPGPAT 743
             PPGP T
Sbjct: 189 APPPGPPT 196


>AE013599-673|AAF59069.2|  856|Drosophila melanogaster CG8643-PA
           protein.
          Length = 856

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 22/68 (32%), Positives = 31/68 (45%)
 Frame = +3

Query: 540 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPP 719
           ++DL  + EN    P    P PP+A ++      S P    L  F  ++  V +T  TP 
Sbjct: 134 EIDLVYVVEN----PLPPSP-PPSADISVDELPGSSPQSFDLDPFAVLHEVVTMTPPTPI 188

Query: 720 QSPPGPAT 743
             PPGP T
Sbjct: 189 APPPGPPT 196


>BT023033-1|AAY55449.1|  186|Drosophila melanogaster IP04035p
           protein.
          Length = 186

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 21/84 (25%), Positives = 35/84 (41%)
 Frame = +1

Query: 85  VSNRLHTSVCLHAQYKNACQNGALTGQVSPSSQNTNITRHQSLWTFIRIRGTKSLQQ*VR 264
           ++  L  ++ LH  ++   +NGA +    P   N + + H   +T+ +I       Q +R
Sbjct: 41  LTGTLTNALRLHLPHR---RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILR 97

Query: 265 VRRSHGLRPSICSLTMSAVCCSKL 336
                GLR  IC L     C   L
Sbjct: 98  GHTRQGLRCRICKLNAHGDCAPNL 121


>AE013599-2059|AAF58136.1|  165|Drosophila melanogaster CG12959-PA
           protein.
          Length = 165

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 21/84 (25%), Positives = 35/84 (41%)
 Frame = +1

Query: 85  VSNRLHTSVCLHAQYKNACQNGALTGQVSPSSQNTNITRHQSLWTFIRIRGTKSLQQ*VR 264
           ++  L  ++ LH  ++   +NGA +    P   N + + H   +T+ +I       Q +R
Sbjct: 27  LTGTLTNALRLHLPHR---RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILR 83

Query: 265 VRRSHGLRPSICSLTMSAVCCSKL 336
                GLR  IC L     C   L
Sbjct: 84  GHTRQGLRCRICKLNAHGDCAPNL 107


>BT025842-1|ABF85742.1|  818|Drosophila melanogaster IP12350p
           protein.
          Length = 818

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 18/65 (27%), Positives = 26/65 (40%)
 Frame = +1

Query: 142 QNGALTGQVSPSSQNTNITRHQSLWTFIRIRGTKSLQQ*VRVRRSHGLRPSICSLTMSAV 321
           +NGA +    P   N + + H   +T+ +I       Q +R     GLR  IC L     
Sbjct: 689 RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGD 748

Query: 322 CCSKL 336
           C   L
Sbjct: 749 CAPNL 753


>BT024328-1|ABC86390.1|  593|Drosophila melanogaster IP10742p
           protein.
          Length = 593

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 18/65 (27%), Positives = 26/65 (40%)
 Frame = +1

Query: 142 QNGALTGQVSPSSQNTNITRHQSLWTFIRIRGTKSLQQ*VRVRRSHGLRPSICSLTMSAV 321
           +NGA +    P   N + + H   +T+ +I       Q +R     GLR  IC L     
Sbjct: 464 RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGD 523

Query: 322 CCSKL 336
           C   L
Sbjct: 524 CAPNL 528


>BT022956-1|AAY55372.1|  148|Drosophila melanogaster IP04235p
           protein.
          Length = 148

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 18/65 (27%), Positives = 26/65 (40%)
 Frame = +1

Query: 142 QNGALTGQVSPSSQNTNITRHQSLWTFIRIRGTKSLQQ*VRVRRSHGLRPSICSLTMSAV 321
           +NGA +    P   N + + H   +T+ +I       Q +R     GLR  IC L     
Sbjct: 26  RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGD 85

Query: 322 CCSKL 336
           C   L
Sbjct: 86  CAPNL 90


>AY061331-1|AAL28879.1|  403|Drosophila melanogaster LD25702p
           protein.
          Length = 403

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +3

Query: 540 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 695
           ++DLP + E + ++    D  PP A++   PF  S      LR      G +
Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 222


>AE014296-1025|AAF50735.1|  525|Drosophila melanogaster CG10489-PA
           protein.
          Length = 525

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +3

Query: 540 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 695
           ++DLP + E + ++    D  PP A++   PF  S      LR      G +
Sbjct: 293 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 344


>AB102715-1|BAD10843.1|  403|Drosophila melanogaster DNA polymerase
           epsilon secondsubunit protein.
          Length = 403

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +3

Query: 540 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 695
           ++DLP + E + ++    D  PP A++   PF  S      LR      G +
Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 222


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,475,863
Number of Sequences: 53049
Number of extensions: 742217
Number of successful extensions: 2308
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2308
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)