Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_O08
         (843 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011775-1|AAH11775.1|  360|Homo sapiens non imprinted in Prader...    32   3.0  
BC000957-1|AAH00957.3|  294|Homo sapiens NIPA2 protein protein.        32   3.0  
AY732242-1|AAU34000.1|  360|Homo sapiens hypothetical protein pr...    32   3.0  
AK096305-1|BAC04757.1|  360|Homo sapiens protein ( Homo sapiens ...    32   3.0  

>BC011775-1|AAH11775.1|  360|Homo sapiens non imprinted in
           Prader-Willi/Angelman syndrome 2 protein.
          Length = 360

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +2

Query: 146 LVFSIGPVHLK-NILMHLTRCPQSSV*IVDCVVGIDFYVLLMKLLRCSRVLRH 301
           L+F +GP H + NIL+++T C       V CV G+   + + +L     VLRH
Sbjct: 165 LIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLG--IAIKELFAGKPVLRH 215


>BC000957-1|AAH00957.3|  294|Homo sapiens NIPA2 protein protein.
          Length = 294

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +2

Query: 146 LVFSIGPVHLK-NILMHLTRCPQSSV*IVDCVVGIDFYVLLMKLLRCSRVLRH 301
           L+F +GP H + NIL+++T C       V CV G+   + + +L     VLRH
Sbjct: 99  LIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLG--IAIKELFAGKPVLRH 149


>AY732242-1|AAU34000.1|  360|Homo sapiens hypothetical protein
           protein.
          Length = 360

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +2

Query: 146 LVFSIGPVHLK-NILMHLTRCPQSSV*IVDCVVGIDFYVLLMKLLRCSRVLRH 301
           L+F +GP H + NIL+++T C       V CV G+   + + +L     VLRH
Sbjct: 165 LIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLG--IAIKELFAGKPVLRH 215


>AK096305-1|BAC04757.1|  360|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38986 fis, clone NT2RI2005814. ).
          Length = 360

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +2

Query: 146 LVFSIGPVHLK-NILMHLTRCPQSSV*IVDCVVGIDFYVLLMKLLRCSRVLRH 301
           L+F +GP H + NIL+++T C       V CV G+   + + +L     VLRH
Sbjct: 165 LIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLG--IAIKELFAGKPVLRH 215


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,364,624
Number of Sequences: 237096
Number of extensions: 2045621
Number of successful extensions: 3545
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3545
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)