Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_O08
         (843 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF101319-5|AAC69356.2|  530|Caenorhabditis elegans Hypothetical ...    31   1.0  
AL132877-17|CAB60849.2|  269|Caenorhabditis elegans Hypothetical...    30   1.8  
Z81565-5|CAB04583.1|  332|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z70267-8|CAA94216.1|  332|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AF022967-5|AAB69878.1|  537|Caenorhabditis elegans Hypothetical ...    28   9.5  

>AF101319-5|AAC69356.2|  530|Caenorhabditis elegans Hypothetical
           protein K08D9.6 protein.
          Length = 530

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 19/66 (28%), Positives = 29/66 (43%)
 Frame = -1

Query: 792 RHHKKSKQRARXQQNVSDETSVLRAEHTTNGGHIVYKMADYTLTVEHYTIPHNTLLELIS 613
           R H+  K ++    N  +  S L +  T   G +V K   Y  T  HY+       E++S
Sbjct: 328 REHEFVKAKSFKTFNFKEIVSTLESSDTVKRGKVVVKPERYNSTWIHYSWHDANRREIVS 387

Query: 612 FNLIGV 595
            NL+ V
Sbjct: 388 PNLVHV 393


>AL132877-17|CAB60849.2|  269|Caenorhabditis elegans Hypothetical
           protein Y105E8B.7 protein.
          Length = 269

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = -1

Query: 783 KKSKQRARXQQNVSDETSVLRAEHTTNGGHIVYKMADYTLTVEHYTIPHNTLLELISFNL 604
           +K+  +   ++ V     + R  +     H++YK ++Y LT+    +   TL      + 
Sbjct: 190 EKASPKKEKKEKVKSPEELTRRLNECTDSHVIYKASEYLLTLPDTKLSQTTLKLSFDLSR 249

Query: 603 IGVLTSYDLG-IIRG 562
               T  D+G I++G
Sbjct: 250 CDSTTLMDIGRILKG 264


>Z81565-5|CAB04583.1|  332|Caenorhabditis elegans Hypothetical
           protein K04C1.6 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/65 (24%), Positives = 32/65 (49%)
 Frame = -2

Query: 296 VILSNTLVISLITRKNRSQQHSRQFKQKIAGSVLNALIYFLNERDLY*TPDIGLHKRFSR 117
           V+ +  ++I +  +K+ S   S  +K  I G  +N + YF +   L      G+++  S 
Sbjct: 21  VLYTYVVIIIIAHKKSESSFRSSFYKLFIVGFFMNMMTYFNSLISLRLPQSNGINETLSN 80

Query: 116 LFVTN 102
            F+T+
Sbjct: 81  FFLTH 85


>Z70267-8|CAA94216.1|  332|Caenorhabditis elegans Hypothetical
           protein K04C1.6 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/65 (24%), Positives = 32/65 (49%)
 Frame = -2

Query: 296 VILSNTLVISLITRKNRSQQHSRQFKQKIAGSVLNALIYFLNERDLY*TPDIGLHKRFSR 117
           V+ +  ++I +  +K+ S   S  +K  I G  +N + YF +   L      G+++  S 
Sbjct: 21  VLYTYVVIIIIAHKKSESSFRSSFYKLFIVGFFMNMMTYFNSLISLRLPQSNGINETLSN 80

Query: 116 LFVTN 102
            F+T+
Sbjct: 81  FFLTH 85


>AF022967-5|AAB69878.1|  537|Caenorhabditis elegans Hypothetical
           protein C13A2.6 protein.
          Length = 537

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 20/71 (28%), Positives = 29/71 (40%)
 Frame = -1

Query: 792 RHHKKSKQRARXQQNVSDETSVLRAEHTTNGGHIVYKMADYTLTVEHYTIPHNTLLELIS 613
           R H+  K ++    +  D  S L +  T   G +V K   Y  T  HY+       E+ S
Sbjct: 335 REHEFIKAKSFAGFSFKDIVSNLSSSTTVKRGKVVVKPERYNSTWIHYSYHDENRREIES 394

Query: 612 FNLIGVLTSYD 580
            NL+ V    D
Sbjct: 395 PNLVHVQRPLD 405


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,526,620
Number of Sequences: 27780
Number of extensions: 353533
Number of successful extensions: 977
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)