Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_O02
(855 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 27 0.29
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 25 0.89
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 24 2.1
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.7
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.7
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 23 4.7
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 6.3
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 26.6 bits (56), Expect = 0.29
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 502 KSLIQKDLQEYTSKITSLNC--SNYMEMLKILQWLLQDLTGAMXXXXXN 642
K+L++ +L+ K+ L C SN ++LK+++W+ ++L GA+ N
Sbjct: 45 KTLVE-ELKSKPGKLVPLQCDLSNQNDILKVIEWVEKNL-GAIDILINN 91
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.89
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 3 LARLVAL--LKMSKSDPGPLPSRWLNCPRKCTSLIAQS 110
LAR+V L + +S+P P R NCP C + QS
Sbjct: 321 LARIVLLNFQEERRSEPVEPPRRKNNCPLHCKPELGQS 358
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/32 (25%), Positives = 19/32 (59%)
Frame = -2
Query: 350 YLVFTRCLSVTFALYFHIFTVHFLYLPFIVKS 255
YL+F+ +S L+ +FT + +Y ++++
Sbjct: 206 YLIFSSTISFYLPLFVMVFTYYKIYRAAVIQT 237
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -3
Query: 544 SCLYIPGGLF 515
SCLY+P G+F
Sbjct: 98 SCLYVPPGIF 107
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -3
Query: 544 SCLYIPGGLF 515
SCLY+P G+F
Sbjct: 98 SCLYVPPGIF 107
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -3
Query: 544 SCLYIPGGLF 515
SCLY+P G+F
Sbjct: 98 SCLYVPPGIF 107
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -3
Query: 544 SCLYIPGGLF 515
SCLY+P G+F
Sbjct: 98 SCLYVPPGIF 107
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -3
Query: 544 SCLYIPGGLF 515
SCLY+P G+F
Sbjct: 98 SCLYVPPGIF 107
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -3
Query: 544 SCLYIPGGLF 515
SCLY+P G+F
Sbjct: 98 SCLYVPPGIF 107
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -3
Query: 544 SCLYIPGGLF 515
SCLY+P G+F
Sbjct: 166 SCLYVPPGIF 175
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -3
Query: 544 SCLYIPGGLF 515
SCLY+P G+F
Sbjct: 166 SCLYVPPGIF 175
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 22.6 bits (46), Expect = 4.7
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -3
Query: 610 GLAGAIGVSSTSPYSLNNSVR*SCLYIPGGL 518
G A + SS PYS N+ + L PG L
Sbjct: 131 GYASPMSTSSYDPYSPNSKIGRDELSQPGSL 161
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.2 bits (45), Expect = 6.3
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -3
Query: 592 GVSSTSPYSLNNSVR*SCLYIPGGLF 515
G T P ++ +CLY+P G+F
Sbjct: 119 GFDGTYPTNVVVKNNGTCLYVPPGIF 144
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,628
Number of Sequences: 438
Number of extensions: 4643
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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