Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_N14
(856 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 28 0.13
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 0.67
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 25 0.67
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 0.67
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 25 0.67
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 24 2.1
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 24 2.1
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 23 2.7
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 23 2.7
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 22 8.3
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 27.9 bits (59), Expect = 0.13
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
Frame = -2
Query: 564 PSW*TTRKISTVIEAGRASLLKGAGPTSSAAAMEAGYDSQGHAEVLASRVLRPHEHVEAV 385
P+ TT +T + A A+ A P++ A A + +R LR +
Sbjct: 216 PATVTTTGATTTLPAASATGTGPATPSAVVATSNATAAMTTGTTTIPTRRLRKRRQNDGE 275
Query: 384 ----RDQDSDEHREHYAGDEASASERLGHGQDA-GAQATF-QQVDXGSQCYWSASA 235
RD D + E ++ A +RL +DA GA + ++ D GS+ Y +++A
Sbjct: 276 GADDRDDDEENEEEEDGRGQSEAEKRLKLDEDADGAVSPLRREKDRGSREYPTSNA 331
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 25.4 bits (53), Expect = 0.67
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +1
Query: 268 IHLLKCSLGTGILAMPQAFARAGLVTGIVFTVLIGVLVTHCLHVLVRSQ 414
+ L +C+ G G L+ + + L + ++FT+L + + L LVR++
Sbjct: 4 VALGRCAGGGGRLSSVLSLSLTSLASSLIFTILCILTLALTLVTLVRAE 52
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 25.4 bits (53), Expect = 0.67
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +1
Query: 268 IHLLKCSLGTGILAMPQAFARAGLVTGIVFTVLIGVLVTHCLHVLVRSQ 414
+ L +C+ G G L+ + + L + ++FT+L + + L LVR++
Sbjct: 4 VALGRCAGGGGRLSSVLSLSLTSLASSLIFTILCILTLALTLVTLVRAE 52
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 25.4 bits (53), Expect = 0.67
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +1
Query: 268 IHLLKCSLGTGILAMPQAFARAGLVTGIVFTVLIGVLVTHCLHVLVRSQ 414
+ L +C+ G G L+ + + L + ++FT+L + + L LVR++
Sbjct: 4 VALGRCAGGGGRLSSVLSLSLTSLASSLIFTILCILTLALTLVTLVRAE 52
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 25.4 bits (53), Expect = 0.67
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +1
Query: 268 IHLLKCSLGTGILAMPQAFARAGLVTGIVFTVLIGVLVTHCLHVLVRSQ 414
+ L +C+ G G L+ + + L + ++FT+L + + L LVR++
Sbjct: 4 VALGRCAGGGGRLSSVLSLSLTSLASSLIFTILCILTLALTLVTLVRAE 52
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 23.8 bits (49), Expect = 2.1
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 465 EAGYDSQGHAEVLASRVLRPHEHVEAVRDQDSDEHREHYAG-DEASASERLGHGQD 301
+ G Q + EVL ++ + V+AVR+ ++ + +++ +G GQD
Sbjct: 688 QVGGGIQQNVEVLPENLVNAQQQVQAVRNYYANLYTKYHGQYPNTQIQNPVGQGQD 743
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 23.8 bits (49), Expect = 2.1
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +1
Query: 313 PQAFARAGLVTGIVFTVLIGVLVTH---CLHV-LVRSQYAACKHLRVPLAV 453
P +A L+ ++ ++++G ++ + C+ V LVR C +L V LAV
Sbjct: 35 PYTVTQAILIALVLGSIIVGTVIGNILVCVAVFLVRKLRRPCNYLLVSLAV 85
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 23.4 bits (48), Expect = 2.7
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +2
Query: 491 PAPFRRLARPASITVDIFLVVYQLGICCVYIVF 589
PAP + +I + L++ +G CCV +F
Sbjct: 50 PAPGKHFHIGLAIIYSMLLIMSLVGNCCVIWIF 82
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 23.4 bits (48), Expect = 2.7
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +2
Query: 491 PAPFRRLARPASITVDIFLVVYQLGICCVYIVF 589
PAP + +I + L++ +G CCV +F
Sbjct: 50 PAPGKHFHIGLAIIYSMLLIMSLVGNCCVIWIF 82
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 106 IADQNGREQSGDDVPSCCP 162
+AD+NG + G +P+ P
Sbjct: 90 VADENGFQVQGSHIPTAPP 108
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,007
Number of Sequences: 438
Number of extensions: 4170
Number of successful extensions: 28
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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