Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_N11
(872 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC131504-1|AAI31505.1| 888|Homo sapiens LMTK2 protein protein. 32 2.4
AY130988-1|AAN08717.1| 1503|Homo sapiens KPI-2 protein protein. 32 2.4
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein. 32 3.1
AB029002-1|BAA83031.2| 1476|Homo sapiens KIAA1079 protein protein. 31 4.1
AY960861-1|AAX57561.1| 117|Homo sapiens anti-oxLDL immunoglobul... 31 5.5
AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot... 31 5.5
AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein. 31 5.5
BC016638-1|AAH16638.1| 677|Homo sapiens Unknown (protein for IM... 30 9.5
AB040883-1|BAA95974.1| 1139|Homo sapiens KIAA1450 protein protein. 30 9.5
>BC131504-1|AAI31505.1| 888|Homo sapiens LMTK2 protein protein.
Length = 888
Score = 32.3 bits (70), Expect = 2.4
Identities = 23/72 (31%), Positives = 31/72 (43%)
Frame = +2
Query: 449 QTSPGLSTPPKDSSLHTDILKILTTFKISSVSLVKRAYTMEPGTNCPQT*RPRRNSAQKW 628
+ PGLS ++ S D ++ T S SL P T+ PRR
Sbjct: 160 ENKPGLSLLQENVSTKGDDTDVMLTGDTLSTSLQSSPEVQVPPTSFETEETPRRVPPD-- 217
Query: 629 SLPTQGQSMITC 664
SLPTQG++ TC
Sbjct: 218 SLPTQGETQPTC 229
>AY130988-1|AAN08717.1| 1503|Homo sapiens KPI-2 protein protein.
Length = 1503
Score = 32.3 bits (70), Expect = 2.4
Identities = 23/72 (31%), Positives = 31/72 (43%)
Frame = +2
Query: 449 QTSPGLSTPPKDSSLHTDILKILTTFKISSVSLVKRAYTMEPGTNCPQT*RPRRNSAQKW 628
+ PGLS ++ S D ++ T S SL P T+ PRR
Sbjct: 775 ENKPGLSLLQENVSTKGDDTDVMLTGDTLSTSLQSSPEVQVPPTSFETEETPRRVPPD-- 832
Query: 629 SLPTQGQSMITC 664
SLPTQG++ TC
Sbjct: 833 SLPTQGETQPTC 844
>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
Length = 2448
Score = 31.9 bits (69), Expect = 3.1
Identities = 48/167 (28%), Positives = 67/167 (40%), Gaps = 7/167 (4%)
Frame = +2
Query: 101 SQTTTQMRTCCIHTPQYPT----SVCTTS*RYRLVEGWYTTSITGEKEK*LTLTG*EASV 268
S+TTT + T TPQ T + TTS TTS T T++G + +
Sbjct: 2250 SRTTTLVTTSTTSTPQTSTTYAHTTSTTSAPTARTTSAPTTSTTSVPTT-STISGPKTTP 2308
Query: 269 GATT*TNSLRS*VRATARESKYPTGFPSCPWTTATLPVTSETVALKLLPSVRGRSVSGAL 448
T S S T+ S T S P TT + +T+ T + P+ R S S A
Sbjct: 2309 SPVP-TTSTTS-AATTSTISAPTTSTTSVPGTTPSPVLTTSTTS---APTTRTTSASPAG 2363
Query: 449 QTSPGLSTP---PKDSSLHTDILKILTTFKISSVSLVKRAYTMEPGT 580
TS +TP P S++ I + S+ S + T PGT
Sbjct: 2364 TTSGPGNTPSPVPTTSTISAPTTSITSAPTTSTTSAPTSSTTSGPGT 2410
>AB029002-1|BAA83031.2| 1476|Homo sapiens KIAA1079 protein protein.
Length = 1476
Score = 31.5 bits (68), Expect = 4.1
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +2
Query: 449 QTSPGLSTPPKDSSLHTDILKILTTFKISSVSLVKRAYTMEPGTNCPQT*RPRRNSAQKW 628
+ PG+S ++ S D ++ T S SL P T+ PRR
Sbjct: 797 ENKPGMSLLQENVSTKGDDTDVMLTGDTLSTSLQSSPEVQVPPTSFETEETPRRVPPD-- 854
Query: 629 SLPTQGQSMITC 664
SLPTQG++ TC
Sbjct: 855 SLPTQGETQPTC 866
>AY960861-1|AAX57561.1| 117|Homo sapiens anti-oxLDL immunoglobulin
heavy chain variable region protein.
Length = 117
Score = 31.1 bits (67), Expect = 5.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 163 MYHLVKIPIGRGLVHHVDYWGEGKVTNL 246
+Y+ +I G G H+DYWG+G + +
Sbjct: 88 VYYCARIHYGSGSSPHIDYWGQGTLVTV 115
>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
protein.
Length = 1217
Score = 31.1 bits (67), Expect = 5.5
Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 3/130 (2%)
Frame = +2
Query: 92 PPLSQTTTQMRTCCIHTPQYPTSVC--TTS*RYRLVEGWYTTSITGEKEK*LTLTG*EAS 265
P + + T T TP +S T S + +TTS T +T +
Sbjct: 318 PGFTSSITTTETTSESTPSLSSSTIYSTVSTSTTAITSHFTTSETAVTPTPVTPSSLSTD 377
Query: 266 VGATT*TNSLRS*VRATARESKYPTGFPSCPWTTATLPVTSETVALKLLPSVRGRSVSGA 445
+ T+ S V T+ T FPS P +TLP + ++ PS++ S
Sbjct: 378 IPTTSLRTLTPSSV-GTSTSLTTTTDFPSIPTDISTLPTRTHIISSS--PSIQSTETSSL 434
Query: 446 L-QTSPGLST 472
+ TSP +ST
Sbjct: 435 VGTTSPTMST 444
>AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein.
Length = 957
Score = 31.1 bits (67), Expect = 5.5
Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 3/130 (2%)
Frame = +2
Query: 92 PPLSQTTTQMRTCCIHTPQYPTSVC--TTS*RYRLVEGWYTTSITGEKEK*LTLTG*EAS 265
P + + T T TP +S T S + +TTS T +T +
Sbjct: 318 PGFTSSITTTETTSESTPSLSSSTIYSTVSTSTTAITSHFTTSETAVTPTPVTPSSLSTD 377
Query: 266 VGATT*TNSLRS*VRATARESKYPTGFPSCPWTTATLPVTSETVALKLLPSVRGRSVSGA 445
+ T+ S V T+ T FPS P +TLP + ++ PS++ S
Sbjct: 378 IPTTSLRTLTPSSV-GTSTSLTTTTDFPSIPTDISTLPTRTHIISSS--PSIQSTETSSL 434
Query: 446 L-QTSPGLST 472
+ TSP +ST
Sbjct: 435 VGTTSPTMST 444
>BC016638-1|AAH16638.1| 677|Homo sapiens Unknown (protein for
IMAGE:4384966) protein.
Length = 677
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = +2
Query: 311 ATARESKYPTGFPSCPWTTATLPVTSETVALKLLPSVRGRSVSGALQTSPGLSTPPKDSS 490
A R + +PTGFP CP T S + LK R G+ S G P D+S
Sbjct: 610 AAERHNPWPTGFPECPEGT-----DSRDLGLKPDKEANRRPEQGSEACSAGCLGPASDAS 664
>AB040883-1|BAA95974.1| 1139|Homo sapiens KIAA1450 protein protein.
Length = 1139
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = +2
Query: 311 ATARESKYPTGFPSCPWTTATLPVTSETVALKLLPSVRGRSVSGALQTSPGLSTPPKDSS 490
A R + +PTGFP CP T S + LK R G+ S G P D+S
Sbjct: 612 AAERHNPWPTGFPECPEGT-----DSRDLGLKPDKEANRRPEQGSEACSAGCLGPASDAS 666
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.316 0.133 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,537,704
Number of Sequences: 237096
Number of extensions: 2882577
Number of successful extensions: 8581
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8581
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -