Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_N10
(870 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0665 - 10268959-10269148,10269344-10269936,10270572-102710... 174 7e-44
12_01_0038 - 312152-312748,312930-313362,313572-314440,314535-31... 163 1e-40
11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29... 161 5e-40
07_03_1774 + 29425486-29425831,29426018-29426235,29426337-294271... 143 2e-34
11_04_0388 + 17076157-17076254,17076762-17076813,17077672-170778... 77 2e-14
07_03_1076 + 23779941-23779988,23780102-23780191,23781580-237816... 50 2e-06
03_06_0476 + 34199577-34199638,34200267-34200397,34200535-342006... 47 2e-05
06_01_1006 + 7836366-7836460,7836568-7836626,7836877-7836961,783... 40 0.002
07_03_0951 - 22836167-22836358,22836455-22837213 33 0.22
11_01_0366 + 2793732-2793838,2793944-2794979 31 1.2
06_03_1359 + 29554078-29554375,29554470-29554655,29554768-295549... 30 2.1
03_01_0363 + 2827990-2828055,2828215-2829306,2829715-2829837,282... 29 4.8
10_08_0166 + 15363630-15365633,15366959-15367496,15367577-15367878 29 6.4
07_01_1060 + 9330217-9330219,9330490-9330561,9330773-9330917,933... 29 6.4
03_02_0599 - 9730204-9730314,9730766-9731549,9731631-9732051,973... 28 8.5
02_05_0256 + 27201483-27202499,27203297-27203375,27204617-272049... 28 8.5
>03_02_0665 -
10268959-10269148,10269344-10269936,10270572-10271004,
10271172-10272040,10272121-10272915,10273612-10273829,
10274931-10275230,10276834-10277161
Length = 1241
Score = 174 bits (424), Expect = 7e-44
Identities = 99/213 (46%), Positives = 131/213 (61%), Gaps = 12/213 (5%)
Frame = +3
Query: 183 ADNSVDPPAKKRKLNT----------GEAHSNNSAMANNGARVEDEIDESLYSRQLYVLG 332
A++S D PAKK ++ GEA ++ NG+ V EIDE L+SRQL V G
Sbjct: 127 AESSSDAPAKKARVGASASEAEAMVAGEAGGGGGGVSGNGSEVA-EIDEDLHSRQLAVYG 185
Query: 333 HDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCTVADLSSQFYLSETVI 512
+ MRR+ +S+VL+SGL GLG EIAKN+ L GVKS+TLHD N + DLS F+LSE I
Sbjct: 186 RETMRRLFASNVLVSGLNGLGAEIAKNLALAGVKSITLHDMGNVEMWDLSGNFFLSEDDI 245
Query: 513 GQNRALTSCEQLSELNHYVPTTAYTGPLTEDFLRKFRVVVLTGASWAEQERVAAF--THA 686
G+NRA+ +L ELN+ V + T LT + L KF+ VV T S + + H
Sbjct: 246 GKNRAVACTAKLQELNNAVLISTLTEDLTNEHLSKFQAVVFTDISLDKAFEFDDYCRNHQ 305
Query: 687 NNIALVIADTRGLFSQVFCDFGPEFTVLDVNGE 785
+I+ + A+ GLF VFCDFGP+FTVLDV+GE
Sbjct: 306 PSISFIKAEVCGLFGSVFCDFGPKFTVLDVDGE 338
>12_01_0038 -
312152-312748,312930-313362,313572-314440,314535-314584,
314589-315192,315674-315718,316100-316317,317020-317332,
318681-318716
Length = 1054
Score = 163 bits (397), Expect = 1e-40
Identities = 90/183 (49%), Positives = 118/183 (64%), Gaps = 17/183 (9%)
Frame = +3
Query: 288 EIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCT 467
EIDE L+SRQL V G + M+R+ +S+VL+SGL GLG EIAKN++L GVKSVTLHDD N
Sbjct: 78 EIDEDLHSRQLAVYGRETMKRLFASNVLVSGLNGLGAEIAKNLVLAGVKSVTLHDDDNVE 137
Query: 468 VADLSSQFYLSETVIGQNRALTSCEQLSELNHYVPTTAYTGPLTEDFLRKF--------- 620
+ DLSS F+L+E +GQNRA T ++L ELN+ V + TG LT++ L F
Sbjct: 138 LWDLSSNFFLTEKDVGQNRAQTCVQKLQELNNAVIISTITGDLTKEQLSNFQLPQIPLLL 197
Query: 621 ------RVVVLTGASWAEQERVAAFTHANN--IALVIADTRGLFSQVFCDFGPEFTVLDV 776
+ VV T S + ++ H + IA + ++ RGLF VFCDFGPEFTVLDV
Sbjct: 198 DIWNSIKAVVFTDISLEKAVEFDSYCHNHQPPIAFIKSEIRGLFGSVFCDFGPEFTVLDV 257
Query: 777 NGE 785
+GE
Sbjct: 258 DGE 260
>11_01_0039 -
290960-291086,291615-291714,291809-292013,292466-292513,
295071-295646,295828-296260,296470-297338,297433-298227,
298709-298753,299135-299352,300055-300364,302715-302984
Length = 1331
Score = 161 bits (392), Expect = 5e-40
Identities = 89/183 (48%), Positives = 117/183 (63%), Gaps = 17/183 (9%)
Frame = +3
Query: 288 EIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCT 467
EIDE L+SRQL V G + M+R+ +S+VL+SGL GLG EIAKN++L GVKSV LHDD N
Sbjct: 155 EIDEDLHSRQLAVYGRETMKRLFASNVLVSGLNGLGAEIAKNLVLAGVKSVNLHDDDNVE 214
Query: 468 VADLSSQFYLSETVIGQNRALTSCEQLSELNHYVPTTAYTGPLTEDFLRKF--------- 620
+ DLSS F+L+E +GQNRA T ++L ELN+ V + TG LT++ L F
Sbjct: 215 LWDLSSNFFLTEKDVGQNRAQTCVQKLQELNNAVIISTITGDLTKEQLSNFQLPQIPLLL 274
Query: 621 ------RVVVLTGASWAEQERVAAFTHANN--IALVIADTRGLFSQVFCDFGPEFTVLDV 776
+ VV T S + ++ H + IA + ++ RGLF VFCDFGPEFTVLDV
Sbjct: 275 DIWNSIKAVVFTDISLEKAVEFDSYCHNHQPPIAFIKSEIRGLFGSVFCDFGPEFTVLDV 334
Query: 777 NGE 785
+GE
Sbjct: 335 DGE 337
>07_03_1774 +
29425486-29425831,29426018-29426235,29426337-29427131,
29427206-29428074,29428317-29428749,29429263-29429859
Length = 1085
Score = 143 bits (346), Expect = 2e-34
Identities = 99/230 (43%), Positives = 125/230 (54%), Gaps = 35/230 (15%)
Frame = +3
Query: 204 PAKKRKLNTGEAHSNNSA---MANNGAR---VEDEIDESLYSRQLYVLGHDAMRRMASSD 365
P KR T + + +A NG+ V EIDE L+SRQL V G + MRR+ +S
Sbjct: 16 PTNKRAAGTDDDRPTDPKRPKVAQNGSTNGVVVPEIDEDLHSRQLAVYGRETMRRLFASH 75
Query: 366 VLISGLGGLGV-------------------EIA--------KNVILGGVKSVTLHDDKNC 464
VL+SGL GLG +IA KN+ L GVKSVTLHD KN
Sbjct: 76 VLVSGLNGLGAEIGSSFYPLTLFVLCFFLFQIAFNCLLITTKNLALAGVKSVTLHDVKNV 135
Query: 465 TVADLSSQFYLSETVIGQNRALTSCEQLSELNHYVPTTAYTGPLTEDFLRKFRVVVLT-- 638
+ DLS+ F+LSE IG+NRA +L ELN+ V +A T LT D L KF+ VV T
Sbjct: 136 EMWDLSANFFLSENDIGKNRAAACVSKLQELNNAVLVSALTEELTTDHLSKFQAVVFTDI 195
Query: 639 GASWAEQERVAAFTHANNIALVIADTRGLFSQVFCDFGPEFTVLDVNGEN 788
G A + +H I+ + A+ GLF VFCDFGPEFTVLDV+GE+
Sbjct: 196 GLDKAYEFDDYCHSHCPPISFIKAEVCGLFGTVFCDFGPEFTVLDVDGED 245
>11_04_0388 +
17076157-17076254,17076762-17076813,17077672-17077867,
17078242-17078321,17078465-17078581,17078895-17078950,
17079238-17079268,17079292-17079342,17080411-17080477,
17080621-17080724,17080802-17080909,17081874-17081987
Length = 357
Score = 77.0 bits (181), Expect = 2e-14
Identities = 46/134 (34%), Positives = 75/134 (55%), Gaps = 9/134 (6%)
Frame = +3
Query: 270 GARVEDEI---DESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSV 440
G E+E+ + +LY RQ+ V G DA +R++ + VL+ G+ G E KN++L GV S+
Sbjct: 4 GGGAEEELTAQETALYDRQIRVWGVDAQKRLSKAHVLVCGMNGTTTEFCKNIVLAGVGSL 63
Query: 441 TLHDDKNCTVADLSSQFYL--SETVI-GQNRALTSCEQLSELNHYVPTTAYTGP---LTE 602
+L DD T DL++ F + E++ G++RA CE L + N V G +
Sbjct: 64 SLMDDHLVTEDDLNANFLIPHDESIYGGRSRAEVCCESLKDFNPMVRVAVEKGDPSLIDG 123
Query: 603 DFLRKFRVVVLTGA 644
+FL KF ++V++ A
Sbjct: 124 EFLDKFDIIVVSCA 137
>07_03_1076 +
23779941-23779988,23780102-23780191,23781580-23781663,
23781792-23782010,23782873-23782974,23783809-23784207,
23784332-23784561,23784749-23784842,23784931-23785113,
23785254-23785351,23785831-23786143
Length = 619
Score = 50.4 bits (115), Expect = 2e-06
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Frame = +3
Query: 357 SSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCTVADLSSQFYLSETVIGQNRALTS 536
++ VL+ G GG+G E+ K + L G + + + D V++L+ QF ++ +GQ++A +
Sbjct: 17 AAKVLMVGAGGIGCELLKTLALSGFRDIHIIDLDTIEVSNLNRQFLFRQSHVGQSKAHVA 76
Query: 537 CEQLSELNHYVPTTAYTGPLTE-----DFLRKFRVVVLTGASWAEQER-VAAFTHANNIA 698
+ + + + T+Y + + +F ++F VVL G + R V A +
Sbjct: 77 RDAVLKFRPNINITSYHANVKDAQFNVEFFKQFN-VVLNGLDNLDARRHVNRLCLAAEVP 135
Query: 699 LVIADTRGLFSQV 737
LV + T G QV
Sbjct: 136 LVESGTTGFLGQV 148
>03_06_0476 +
34199577-34199638,34200267-34200397,34200535-34200698,
34201007-34201117,34201308-34201387,34201489-34201639,
34201736-34201829,34202421-34202509,34203672-34203745,
34203859-34204021,34204445-34204530,34205011-34205094,
34205186-34205366,34205837-34205887
Length = 506
Score = 46.8 bits (106), Expect = 2e-05
Identities = 44/147 (29%), Positives = 60/147 (40%), Gaps = 7/147 (4%)
Frame = +3
Query: 306 YSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHD-DKNCTVADLS 482
Y RQL + G + + + + G G E KN++LGGV SVT+ D D C
Sbjct: 16 YDRQLRIWGDQGQAALEKASICLLTCGPTGTEAMKNLVLGGVGSVTVVDVDAEC------ 69
Query: 483 SQFYLSETVIGQNRALTSCEQLSELNHYVPTT-AYTGPL-----TEDFLRKFRVVVLTGA 644
+GQ+RA + C L ELN V PL F +F VV+ T
Sbjct: 70 ---------LGQSRAKSVCSFLQELNDAVNAKFVEESPLALIDTNPSFFSQFTVVIATQL 120
Query: 645 SWAEQERVAAFTHANNIALVIADTRGL 725
++ NI LV A + GL
Sbjct: 121 PERSLLKLDDICRKANIVLVAARSYGL 147
>06_01_1006 +
7836366-7836460,7836568-7836626,7836877-7836961,
7837349-7837496,7837774-7837986,7838403-7838537,
7838659-7838790,7838884-7839099,7839212-7839336,
7839787-7839844,7839977-7840087
Length = 458
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/84 (23%), Positives = 43/84 (51%)
Frame = +3
Query: 279 VEDEIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDK 458
++DE+ +R + G ++ +++ S V++ GLGG+G A ++ GV + L D
Sbjct: 69 LDDEVVSEQLTRNIQFFGMESQKKVTGSFVVVIGLGGVGSHAASMLLRSGVGRLLLVDFD 128
Query: 459 NCTVADLSSQFYLSETVIGQNRAL 530
+++ L+ + +G +AL
Sbjct: 129 QVSLSSLNRHAVATRDDVGTPKAL 152
>07_03_0951 - 22836167-22836358,22836455-22837213
Length = 316
Score = 33.5 bits (73), Expect = 0.22
Identities = 27/82 (32%), Positives = 36/82 (43%)
Frame = -3
Query: 406 AISTPKPPRPDIRTSELAIRRIASWPST*SWREYRLSSISSSTRAPLFAIAELFECASPV 227
A+S P P P +S RR SW S R + S+ S T AP +ELF S
Sbjct: 61 ALSPPPTPTPSQPSSSYHRRRRESWESAAGSRHTSIRSVGSDT-AP----SELFPTMSRE 115
Query: 226 FSFRFFAGGSTELSATSALDIG 161
FS A + +A +A + G
Sbjct: 116 FSAMVAAAANANAAAAAAANGG 137
>11_01_0366 + 2793732-2793838,2793944-2794979
Length = 380
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 315 QLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGG-VKSVTL 446
+L + HD R ++ VL+ G G +GVE+A +++ K VTL
Sbjct: 115 RLQMFEHDKARIASAGSVLVVGGGPIGVELAAEIVMASPEKRVTL 159
>06_03_1359 +
29554078-29554375,29554470-29554655,29554768-29554923,
29555557-29555694,29555789-29555909,29556339-29556345
Length = 301
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +3
Query: 117 CQRNQNSWQNCARSCPM--SSAEVADNSVDPPAKKRKLNTGEAHSNNSAMANNG 272
C N + CA CP+ +A A PP+ + N A N +A A NG
Sbjct: 11 CPNAANPFHRCADYCPVPAPAAATAKPPPPPPSSRPAQNGTAAPQNGTAAAQNG 64
>03_01_0363 +
2827990-2828055,2828215-2829306,2829715-2829837,
2829994-2830110,2830248-2830429,2830558-2830744,
2830846-2831055,2831177-2831305,2832179-2832247,
2832751-2832873,2832957-2833007,2833101-2833250
Length = 832
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/78 (28%), Positives = 36/78 (46%)
Frame = +3
Query: 309 SRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCTVADLSSQ 488
S+QL V ++ + DVL + G IA ++ G VK L DK+ ++
Sbjct: 388 SKQLSVTNVKTLKM--NDDVLAVTISPTGNHIAVALLDGAVKFSNLEQDKHKQISIFRQS 445
Query: 489 FYLSETVIGQNRALTSCE 542
Y+ + +I N L SC+
Sbjct: 446 VYMGKAII-VNIFLASCK 462
>10_08_0166 + 15363630-15365633,15366959-15367496,15367577-15367878
Length = 947
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 135 SWQNCARSCPMSSAEVADNSVDPPAKKRKLNTGE 236
+W S P SSA D+S+ P + +R+ GE
Sbjct: 736 AWSPTPSSSPSSSASSEDSSIAPDSSRRRQREGE 769
>07_01_1060 +
9330217-9330219,9330490-9330561,9330773-9330917,
9331006-9331133,9331689-9331803,9331881-9331984,
9332356-9332568,9332637-9332657
Length = 266
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 366 VLISGLGGLGVEIAKNVILGGVK 434
VLI G G +GVEIAK + GVK
Sbjct: 117 VLILGFGAIGVEIAKRIRPFGVK 139
>03_02_0599 -
9730204-9730314,9730766-9731549,9731631-9732051,
9732139-9732385,9733730-9733921,9734071-9734204,
9734316-9734477,9736162-9736200,9737507-9737825
Length = 802
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 129 QNSWQNCARSCPMSSAEVADNSVDPPAKKRKLNTGEAHSNNSAMANNGARVEDEIDE 299
+N WQ+ R C SS +++ + K K + + NNS +NN +D+ DE
Sbjct: 206 KNLWQHVWRRCHSSSGSGSESGI-RTQKCTKPKVDDEYENNSG-SNNDNEDDDDNDE 260
>02_05_0256 +
27201483-27202499,27203297-27203375,27204617-27204946,
27205029-27205198
Length = 531
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 654 EQERVAAFTHANNIALVIADTRGLFSQVFCDFGPEF 761
E+ER AAF +N+ IAD + +VF G F
Sbjct: 308 ERERKAAFERLDNLGRCIADVESIGEKVFRALGMAF 343
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,722,389
Number of Sequences: 37544
Number of extensions: 504611
Number of successful extensions: 1496
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1492
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -