Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_N09
         (839 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1214 - 11583510-11583653,11585063-11585148,11585234-115853...    35   0.093
07_01_0838 - 6811525-6812364,6813085-6813211,6813321-6813670           29   3.5  
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227...    29   4.6  
12_01_0926 + 9178804-9180324,9180612-9181157                           29   6.1  
05_07_0250 + 28669593-28669660,28669759-28669817,28670144-286702...    28   8.1  

>07_01_1214 -
           11583510-11583653,11585063-11585148,11585234-11585316,
           11585415-11585572,11587083-11587243,11588058-11588279,
           11588553-11588677,11589538-11589656,11589961-11590020,
           11590292-11590370,11591936-11592100,11592632-11592660,
           11593439-11593500,11594724-11594859,11594999-11595161,
           11595245-11595384,11597811-11597899,11598914-11599001,
           11599558-11599658,11599711-11599859,11600769-11600870,
           11601888-11601973,11602064-11602309
          Length = 930

 Score = 34.7 bits (76), Expect = 0.093
 Identities = 20/78 (25%), Positives = 36/78 (46%)
 Frame = +3

Query: 426 AINILVGAVKQIAREASPHNRVELDLQVASGAFSLTFLDGMTNVYHGVQNXXXXXXXXXX 605
           A   + G ++++A  A P  R+E++  + SG+FS+ FL     + +  +N          
Sbjct: 91  AARYIKGQLEELAARAGPEYRIEVEESLVSGSFSMRFLRHRVTLTY--RNHKNIVMRISS 148

Query: 606 XXXXXXXTAILLNCHFDT 659
                   A L+N HFD+
Sbjct: 149 NVSEDQDLAFLVNGHFDS 166


>07_01_0838 - 6811525-6812364,6813085-6813211,6813321-6813670
          Length = 438

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 664 PIVQEPAT-TXPGCAVLLEVMRALAATXHPXRHDVIFLLNGAEE 792
           P+VQEP T T PG  + L+++    A  HP + + + L N   E
Sbjct: 271 PVVQEPGTSTPPGLVMFLDLLN--QAIPHPPQPETMDLFNMTPE 312


>08_02_0520 - 18121561-18121821,18122216-18122470,18122560-18122731,
            18122824-18123105,18123159-18123292,18123425-18123508,
            18123611-18123901,18123982-18124314,18124620-18124750,
            18124826-18124930,18125011-18125167,18125248-18125351,
            18125442-18125602,18125800-18126116,18126369-18126650,
            18127011-18127312,18127609-18127699,18127771-18127824,
            18128110-18128186,18128279-18128438,18128545-18128629,
            18129059-18129367,18129514-18129890
          Length = 1507

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = +1

Query: 190  ILPQPPLSTWWLFVALAA-TGLSLYGVSLIDYA-LPEPL-TRAAPVEKFIAD-IAYEH 351
            ++P+P +  WW + + A     +LYG+    +  L EPL     P++ F+ +   ++H
Sbjct: 1417 VIPRPSMPVWWRWYSWACPVSWTLYGLVASQFGDLKEPLRDTGVPIDVFLREYFGFKH 1474


>12_01_0926 + 9178804-9180324,9180612-9181157
          Length = 688

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +1

Query: 205 PLSTWWLFVALAATGLSLYGVSLIDYALPEPLTRAAPVEKFIADIA 342
           PL+ ++LF  L   GLSL+ +   DY   E     AP    +  +A
Sbjct: 26  PLAVFYLFGLLITAGLSLWRLLQRDYGAGEEAANLAPALNVLYSLA 71


>05_07_0250 +
           28669593-28669660,28669759-28669817,28670144-28670248,
           28670983-28671019,28671446-28671542,28671700-28671781,
           28671870-28671939,28672049-28672212,28672897-28672940,
           28673021-28673176,28673273-28673494,28673736-28673883,
           28673947-28674034,28675032-28675159,28675259-28675323,
           28675380-28675426,28675427-28675539,28676003-28676019
          Length = 569

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 384 HPRANRSQIDKMLISYVCNELLN 316
           H + NR ++DK+ I  +C E+LN
Sbjct: 6   HSKINRKRLDKLDIIKICEEILN 28


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,172,748
Number of Sequences: 37544
Number of extensions: 380092
Number of successful extensions: 789
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)