Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_N08
         (861 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF113908-1|ABL11577.1|  279|Homo sapiens odontogenic ameloblast-...    31   4.1  
BC130619-1|AAI30620.1| 1100|Homo sapiens CNTN5 protein protein.        30   9.4  
BC039255-1|AAH39255.1|  617|Homo sapiens CNTN5 protein protein.        30   9.4  
AB013803-1|BAA36580.2| 1026|Homo sapiens hNB-2s protein.               30   9.4  
AB013802-1|BAA36579.2| 1100|Homo sapiens hNB-2 protein.                30   9.4  

>EF113908-1|ABL11577.1|  279|Homo sapiens odontogenic
           ameloblast-associated protein precursor protein.
          Length = 279

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
 Frame = +1

Query: 421 QVGPXDP----SVPADAVRTSHQRPRSVPLLRSSAAGQSFRRRRVLGRIPWRQGQGVLPR 588
           Q G  DP    + P      SH  P           GQ F+   V   +PW Q Q  +PR
Sbjct: 104 QAGQVDPLQLQTPPQTQPGPSHVMPYVFSFKMPQEQGQMFQYYPVYMVLPWEQPQQTVPR 163

Query: 589 RSVRTRRTNLPEAATAEARF 648
              +TR+    E     A+F
Sbjct: 164 SPQQTRQQQYEEQIPFYAQF 183


>BC130619-1|AAI30620.1| 1100|Homo sapiens CNTN5 protein protein.
          Length = 1100

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +1

Query: 424 VGPXDPSVPADAVRTSHQRPRSVPLLRSSAAGQSFRRRRVLGRIPW 561
           +G  DPS P+  +RT+   P++ P   ++ +G+S RR  ++  I W
Sbjct: 754 IGTGDPSTPSRMIRTNEAVPKTAP---TNVSGRSGRRHELV--IAW 794


>BC039255-1|AAH39255.1|  617|Homo sapiens CNTN5 protein protein.
          Length = 617

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +1

Query: 424 VGPXDPSVPADAVRTSHQRPRSVPLLRSSAAGQSFRRRRVLGRIPW 561
           +G  DPS P+  +RT+   P++ P   ++ +G+S RR  ++  I W
Sbjct: 460 IGTGDPSTPSRMIRTNEAVPKTAP---TNVSGRSGRRHELV--IAW 500


>AB013803-1|BAA36580.2| 1026|Homo sapiens hNB-2s protein.
          Length = 1026

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +1

Query: 424 VGPXDPSVPADAVRTSHQRPRSVPLLRSSAAGQSFRRRRVLGRIPW 561
           +G  DPS P+  +RT+   P++ P   ++ +G+S RR  ++  I W
Sbjct: 680 IGTGDPSTPSRMIRTNEAVPKTAP---TNVSGRSGRRHELV--IAW 720


>AB013802-1|BAA36579.2| 1100|Homo sapiens hNB-2 protein.
          Length = 1100

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +1

Query: 424 VGPXDPSVPADAVRTSHQRPRSVPLLRSSAAGQSFRRRRVLGRIPW 561
           +G  DPS P+  +RT+   P++ P   ++ +G+S RR  ++  I W
Sbjct: 754 IGTGDPSTPSRMIRTNEAVPKTAP---TNVSGRSGRRHELV--IAW 794


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,613,907
Number of Sequences: 237096
Number of extensions: 2056616
Number of successful extensions: 8605
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8605
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)