Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_N01
         (814 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016688-3|AAB66076.2|  674|Caenorhabditis elegans Hypothetical ...    32   0.56 
U58754-8|AAK72082.1|  325|Caenorhabditis elegans Serpentine rece...    29   4.0  
Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical pr...    28   9.1  
U00048-6|AAB53828.1|  873|Caenorhabditis elegans Hypothetical pr...    28   9.1  
AF106577-5|AAC78192.2|  353|Caenorhabditis elegans Hypothetical ...    28   9.1  

>AF016688-3|AAB66076.2|  674|Caenorhabditis elegans Hypothetical
           protein F18A12.4 protein.
          Length = 674

 Score = 31.9 bits (69), Expect = 0.56
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = -1

Query: 301 RDLISNLILFGSQFSHASLIQSKTNK--NLIENVFNKCTLALYTPNSEPK 158
           +D     I FG++F     IQ+ T+K  NL++ VF+KC  +  T N   K
Sbjct: 85  QDFKKRNIFFGNRFEFLHKIQNSTSKSENLMKLVFDKCEASKKTSNDNYK 134


>U58754-8|AAK72082.1|  325|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 13 protein.
          Length = 325

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = -3

Query: 281 NIIWFTIFTRLVDSKQDQQELDRKCFQQMYTCTLHSEF*TKKIVLHKMHFTLIHLS 114
           +++ F  F    D   + +E+  K F   Y  T H+ + TK I+     FT++H++
Sbjct: 139 SLLQFVSFLWAQDDPDEMREILTKHFPA-YNLTEHTVYGTKNIICFSALFTILHMT 193


>Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical
           protein ZC518.2 protein.
          Length = 984

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -2

Query: 603 GCVPHCPDVNYLNDVYRL 550
           GCV H P+ NY ND++++
Sbjct: 611 GCVYHFPNYNYRNDIHQV 628


>U00048-6|AAB53828.1|  873|Caenorhabditis elegans Hypothetical
           protein C05D11.8 protein.
          Length = 873

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 223 NLIENVFNKCTLALYTPNSEPKKL 152
           +L+EN+ N CTL +   NS+P+ +
Sbjct: 59  SLLENMTNMCTLLMLEANSQPEPI 82


>AF106577-5|AAC78192.2|  353|Caenorhabditis elegans Hypothetical
           protein F46F5.14 protein.
          Length = 353

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = +1

Query: 397 LCVFALNRSNEF*HLHTYY*CTKIIMHKKRNENVLCL*HYTRGLSHDNWLT 549
           +C  A N+S  F  L TY  C K +M    +   + +     G + D WLT
Sbjct: 206 MCRSAYNKSKNFNDLFTYEACIKAMMGVGTDFGKVRILKKGTGWARDGWLT 256


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,238,913
Number of Sequences: 27780
Number of extensions: 316840
Number of successful extensions: 692
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)