Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_M18
(894 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 85 1e-17
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 38 0.002
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 38 0.003
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 37 0.003
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 37 0.003
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 37 0.004
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 35 0.014
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 31 0.17
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 31 0.17
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 31 0.22
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 31 0.29
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 29 0.89
SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces pombe... 29 1.2
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 28 1.6
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 28 1.6
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 28 1.6
SPAC24H6.11c |||sulfate transporter |Schizosaccharomyces pombe|c... 28 1.6
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 28 2.1
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 28 2.1
SPBC651.01c |nog1|SPBC725.18c|GTP binding protein Nog1 |Schizosa... 27 2.7
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 27 2.7
SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces... 27 3.6
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 27 3.6
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 3.6
SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat protein|Schizo... 27 4.8
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 27 4.8
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 27 4.8
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 26 6.3
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 26 6.3
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 26 8.3
SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyc... 26 8.3
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 85.4 bits (202), Expect = 1e-17
Identities = 42/145 (28%), Positives = 79/145 (54%)
Frame = +2
Query: 296 TKTDFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIK 475
TK++++++ S DG++KFW K G+E++K F H A + + L T + +K++K
Sbjct: 56 TKSNYILSVSYDGYVKFWHKTPNGVEYIKEFHAHNAMLLSAELSQDERLFITGADDKSLK 115
Query: 476 VFDVVNFDMINMISIDFEPYRVEWVHSAGDPISALAVSDRNTNKIHVYDGTQASGTPLHT 655
VFDV + D++N+I ++F P + +S S +AVS + I ++ + G L+T
Sbjct: 116 VFDVESIDLVNIIDLEFLPKAICCFNSPSLKTSLIAVSSAESPLIFFFE-SGGDGEVLYT 174
Query: 656 FETLHQTAVAVIKYXPVFETAVSVD 730
+ H V ++Y + +S+D
Sbjct: 175 VKK-HTAPVHCLRYLSTLDCFLSID 198
Score = 29.5 bits (63), Expect = 0.67
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 184 KKRKVLEFETLYLENLPSSETYERSFMHRXYCY 282
KKR + ++L NLP + Y +S+MH Y
Sbjct: 19 KKRIKQNHDQVFLHNLPDAPRYTKSYMHNAEIY 51
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 37.9 bits (84), Expect = 0.002
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +2
Query: 308 FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 487
F+V+ Q G L F E G F H +P+ VA + TLL A K I ++DV
Sbjct: 159 FIVSGHQTGQL-FLISTETGRLF-HVLSGHTSPVRSVAFSPGSTLLAAAGDSKMITIYDV 216
Query: 488 VNFDMINMISIDFEPYRVEWVHS-AGDPISALAVSDRNTNKIHVYD 622
++ D + + W+ + A +P+ L +S KI ++D
Sbjct: 217 LSGDQVGQLR-----GHAAWIFAVAFNPVGDLLLSADVEGKIKIWD 257
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 37.5 bits (83), Expect = 0.003
Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 290 LVTKTDFVVTASQDGHLKFWKKQEEG-IEFVKH-FRCHLAPISHVAANSTGTLLCTASPE 463
+V ++++++S+D + W+ E H R HLA ++ V +S L+ TAS +
Sbjct: 309 VVVSENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSD 368
Query: 464 KTIKVFDVVNFDMINMI 514
+T++ +D+ I +I
Sbjct: 369 RTLRTWDITTGHCIRII 385
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 37.1 bits (82), Expect = 0.003
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +2
Query: 305 DFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFD 484
+F+++ S+DG + W K + + + H API V + G TAS ++T +++D
Sbjct: 416 EFILSCSEDGFTRLWSKDTKST--IVKYAGHNAPIWDVQFSPFGYYFATASHDQTARLWD 473
Query: 485 V 487
V
Sbjct: 474 V 474
Score = 32.7 bits (71), Expect = 0.072
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 308 FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 487
++ T S D + W + G V+ F H +P+S + ++ G L +A IKV+D+
Sbjct: 501 YLATGSSDHTTRMWDVRTGGT--VRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDL 558
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 37.1 bits (82), Expect = 0.003
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = +2
Query: 305 DFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFD 484
+ V SQD F + G + ++ H P+S ++ NS+G+LL + S +KT++++D
Sbjct: 437 EIVCAGSQDSFEIFMWSVQTG-QLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWD 495
Query: 485 V 487
+
Sbjct: 496 I 496
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 36.7 bits (81), Expect = 0.004
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Frame = +2
Query: 311 VVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVV 490
+ + + D ++ W V F H + I + TG+ L + S +KT++V+++
Sbjct: 162 LASGADDSRVRLWDLNSSRSMAV--FEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIK 219
Query: 491 NFDMINMISIDFEPYRVEWVHSAGDPISALAVSDRNTNKIHVYDGTQASGTPLHT-FETL 667
+ I + + WV+ G P + + N I +D SG+ L +T
Sbjct: 220 KRSAVRTIPVFHSVEAIGWVN--GQPEEKILYTAGEGNLILAWD--WKSGSRLDPGVDTT 275
Query: 668 HQTAVAVIKYXPVFE-TAVSV 727
H A+I+ P E T +SV
Sbjct: 276 HSETNAIIQVVPFSENTLLSV 296
Score = 32.3 bits (70), Expect = 0.096
Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Frame = +2
Query: 377 VKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVVNFDMIN--------MISIDFEP 532
+K + H P+ + + T TLL T E +KV+D+ + + + ++ F
Sbjct: 96 IKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGK 155
Query: 533 YRVEWVHSAGDPISALAVSDRNTNK-IHVYDG 625
++ WV ++G S + + D N+++ + V++G
Sbjct: 156 HQNTWVLASGADDSRVRLWDLNSSRSMAVFEG 187
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 35.1 bits (77), Expect = 0.014
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +2
Query: 311 VVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVV 490
+ TAS D ++ W + +F+ R H+A + A ++ LL ++S + T+KV+DV
Sbjct: 404 IATASFDSSVRLWDGKTG--KFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVR 461
Query: 491 NFDM-INMISIDFEPYRVEW 547
+ M ++ + + + V+W
Sbjct: 462 SKKMKFDLPGHEDQVFAVDW 481
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +2
Query: 311 VVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFD 484
+V+AS D L W Q+ K H ++H + + G + TAS + +++++D
Sbjct: 361 LVSASDDLQLILWDPQKSTKPITK-MHGHQKVVNHASFSPDGRCIATASFDSSVRLWD 417
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 31.5 bits (68), Expect = 0.17
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = +2
Query: 371 EFVKHFRCHLAPISHVAANSTGT-LLCTASPEKTIKVFDVVN-FDMINMI-SIDFEPYRV 541
E K + H I+ VA N LL TAS +KT+ ++D+ N + ++ + + E Y +
Sbjct: 272 EAPKVIQAHSKAINAVAINPFNDYLLATASADKTVALWDLRNPYQRLHTLEGHEDEVYGL 331
Query: 542 EWVHSAGDPISALAVSDR 595
EW +PI A + +DR
Sbjct: 332 EW-SPHDEPILASSSTDR 348
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 31.5 bits (68), Expect = 0.17
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +2
Query: 311 VVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVV 490
+V+ S D ++ W Q+ ++ H PI V+ ++ GTL TAS + +++DV+
Sbjct: 153 LVSGSWDETVRIWNLQDGTC--LRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVL 210
Query: 491 N 493
+
Sbjct: 211 S 211
Score = 30.7 bits (66), Expect = 0.29
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +2
Query: 308 FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFD 484
++ T+S DG +K W +E H IS V + L +AS +KTI+++D
Sbjct: 68 WIATSSSDGTIKIWSALTFRLECT--LFGHYRGISQVKWATGSKYLASASDDKTIRIWD 124
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 31.1 bits (67), Expect = 0.22
Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +2
Query: 248 MKEVSCTGXIVTHVLVTKTDFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAAN 427
++ + C G ++ + +V+A + G L+ + + ++ + H I +A
Sbjct: 430 IRTIEC-GYVLAASFINNDKCIVSAYKSGELEVYDIASSSL--IERIQAHDGAIWDLAVG 486
Query: 428 STGTLLCTASPEKTIKVFDV-VNFDMI 505
GT TAS + T+K++ + +FD +
Sbjct: 487 HDGTYFATASADHTVKLWSLKSSFDFV 513
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 30.7 bits (66), Expect = 0.29
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 215 YTWRICLHQKHMKEVSCTGXIVTHVLVTKTD-FVVTASQDGHLKFW 349
Y + + +K + S +G VT V++ + +VTAS DG LKFW
Sbjct: 471 YNMQSGIKRKSFGQSSLSGKPVTAVMLDNVNRILVTASLDGILKFW 516
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 29.1 bits (62), Expect = 0.89
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 386 FRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVVNFDMI 505
F H + ++ + G L +AS +KT +FDVVN +
Sbjct: 209 FHDHSDEVWQISYSHNGRYLASASKDKTAIIFDVVNLKRV 248
>SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 377 VKHFRCHLAPISHVAANSTGTLLCTASPE-KTIKVFDVVNFDMINMISIDFEPYRVEWVH 553
+ H ++ +A NS GT+L TAS + I+VF + + + P ++ +
Sbjct: 181 ITKIEAHKDSLACLAFNSDGTMLATASDNGRIIRVFAIPSGQRLYQFRRGSLPAQIYSI- 239
Query: 554 SAGDPISALAVSDRNTNKIHVY 619
A P S+L +T +H++
Sbjct: 240 -AFHPDSSLLTVTSSTQTVHIF 260
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 377 VKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 487
VK F+ H I+ + + L TAS +KT+KV+D+
Sbjct: 325 VKQFQAHSEYITSLDFSHPFGTLATASTDKTVKVWDM 361
Score = 27.9 bits (59), Expect = 2.1
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +2
Query: 395 HLAPISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYRVEWVHSAGDPIS 574
H AP++ +A +S L+ T + +KT++ +D+V I ++DF W + S
Sbjct: 434 HTAPVTALALSSDDVLI-TGADDKTVRQWDIVTGRCIQ--TLDF-----VWAETHDTSTS 485
Query: 575 ALAVSD 592
+ VSD
Sbjct: 486 QILVSD 491
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 278 VTHVLVTKTD-FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTA 454
VT + ++ D F+ S D ++ W V+ H + +A + ++L +
Sbjct: 446 VTAIAISPNDQFIAVGSLDQIIRVWSVSGT---LVERLEGHKESVYSIAFSPDSSILLSG 502
Query: 455 SPEKTIKVFDV 487
S +KTIKV+++
Sbjct: 503 SLDKTIKVWEL 513
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 398 LAPISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYR-VEW 547
LA S ++NS LL TAS + T ++FD I + + E R V+W
Sbjct: 234 LAVRSIKSSNSAHDLLATASYDMTSRIFDPEQHSCIRKVDLHSEFVRDVDW 284
Score = 25.8 bits (54), Expect = 8.3
Identities = 32/128 (25%), Positives = 47/128 (36%)
Frame = +2
Query: 311 VVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVV 490
VVT S DG +K W + + ++ S+ LL S + K +D
Sbjct: 119 VVTGSWDGTIKLWLGNLPNSVQTLNNGSNSRILTVATHYSSPNLLGYTSSDGLCKFWDFR 178
Query: 491 NFDMINMISIDFEPYRVEWVHSAGDPISALAVSDRNTNKIHVYDGTQASGTPLHTFETLH 670
+ D I I + + W S + + N N ++ YD TPL H
Sbjct: 179 SSDKFMSIEIPNQITCMNWSKSN----HRMVYTADNNNLVYCYDIANLK-TPLSVLSG-H 232
Query: 671 QTAVAVIK 694
Q AV IK
Sbjct: 233 QLAVRSIK 240
>SPAC24H6.11c |||sulfate transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 958
Score = 28.3 bits (60), Expect = 1.6
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = +2
Query: 431 TGTLLCTASPEKT-IKVFDVVNFDMI---NMISIDFEPYRVEWVHSAGDPISALAVSDRN 598
T T +C + +VF+ VN + NM+ D++ YR + +H AG LAV ++
Sbjct: 706 TLTTMCFGGDDNCGCQVFEDVNSSLEYCENMLLDDYDVYRTKLLHKAGYS-HTLAVPGKH 764
Query: 599 TNKIHVYDGTQASGTPLHTFETLHQTAVAVIK 694
I + + S +P H + L Q A++ +K
Sbjct: 765 KQNISMAE--TFSPSPRH--DLLRQVAMSSVK 792
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +2
Query: 308 FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 487
+ ++AS D ++ W E+G E F H + + V+ + + + S +KTIK++++
Sbjct: 77 YALSASWDKTIRLWDL-EKG-ECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNI 134
Query: 488 V 490
+
Sbjct: 135 I 135
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/70 (18%), Positives = 36/70 (51%)
Frame = +2
Query: 308 FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 487
++ + +D +K W + + ++H+ HL+ + + + T +L TA + +V+D+
Sbjct: 219 YLFSCGEDKMVKCWDLETNKV--IRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDM 276
Query: 488 VNFDMINMIS 517
++++S
Sbjct: 277 RTRQNVHVLS 286
>SPBC651.01c |nog1|SPBC725.18c|GTP binding protein Nog1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +2
Query: 350 KKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFE 529
K+Q+ +EF++ R HL+ + + N T TLL P F + + +D +
Sbjct: 142 KRQKSSLEFLEQVRQHLSRLPAIDPN-TRTLLVCGYPNVGKSSF----MNKVTRAQVDVQ 196
Query: 530 PY 535
PY
Sbjct: 197 PY 198
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +2
Query: 308 FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 487
+ TAS D + W I ++ F HL+ + V + + T S +KT +++DV
Sbjct: 435 YFATASHDQTAQLWSCDH--IYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDV 492
>SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 681
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 633 ACVPSYT*ILFVFLSETAKAEMGSPAECTHSTRYG 529
AC P T + F+FL +TA + EC HS+ G
Sbjct: 492 ACSPK-THVSFLFLLKTATQLLNKLVECLHSSDLG 525
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 27.1 bits (57), Expect = 3.6
Identities = 20/105 (19%), Positives = 42/105 (40%), Gaps = 1/105 (0%)
Frame = +2
Query: 386 FRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYRVEWVHSAGD 565
F + P+ + + T T L S + TI +FD + ++ ++ +EW+
Sbjct: 301 FHNNKGPVLSLKWSGTDTYLAAGSADGTITLFDQLKQTQYSIDTLASSVLDIEWI----- 355
Query: 566 PISALAVSD-RNTNKIHVYDGTQASGTPLHTFETLHQTAVAVIKY 697
SD + +++ DG P+ T H ++ ++Y
Sbjct: 356 SFDEFVTSDVEGSLRVYKVDGK----APVSTVSHAHDNSIVALRY 396
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/70 (17%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 299 KTDFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAAN-STGTLLCTASPEKTIK 475
+ ++TAS D +K W + + G H +P++ + N GT + + +
Sbjct: 399 RISLLLTASSDTTVKLWSRGDAGAFECLHVFSFSSPVNCIDWNLREGTPILAVASNSIVS 458
Query: 476 VFDVVNFDMI 505
+++ ++ +
Sbjct: 459 MYNAISLQQL 468
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +2
Query: 371 EFVKHFRCHLAPISHVAANSTGTLL--CTASPEKTIKVFDVVNFDMINMISIDFEPYRVE 544
E K F H +SH N ++ C S + ++ + D EPYR++
Sbjct: 1056 ELQKLFGIHFHKLSHKNPNEIIRMILHCDDSMNECVEFLSSDKVLNQPKLKADLEPYRID 1115
Query: 545 WVHSAGDPISA 577
W + GD +++
Sbjct: 1116 WA-NGGDLVNS 1125
>SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 509
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 557 AGDPISALAVSDRNTNKIHVYDGTQASGTPLHTFETLHQTAVAVIKY 697
A PI+ + +T I+VY T++ +HT + +HQ V +++
Sbjct: 251 AWSPINWTLLVGGSTGNIYVYRRTKSMMRRVHTIKKVHQEQVCGLEW 297
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 308 FVVTASQDGHLKFWKKQE 361
+V+TASQDG +K W +E
Sbjct: 149 YVLTASQDGLIKLWDYKE 166
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/60 (21%), Positives = 31/60 (51%)
Frame = +2
Query: 311 VVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVV 490
+++AS DG +K W + ++ F + ++ + +S + T S ++IK++D +
Sbjct: 1194 LISASSDGEVKLWDIRMN--HSLQTFSTDNSGLTSLTVHSHAPVYATGSSNQSIKIWDTL 1251
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 82 KEQPMTKKLLENVTVMIQKTGLDQCLQXAVKPKQKKRKVLEFETLYLENL 231
K +P +K +N+ + +QK ++ L+ + K KK+K + +L+ L
Sbjct: 90 KLRPYSKYASKNIELKLQKKEKEEELRNLEEEKAKKKKDANLKRKFLDTL 139
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -2
Query: 656 TCAAECPKLACRRTRESYLCFCPRQLK 576
T EC C R R Y CPR+L+
Sbjct: 372 TLLTECYSSTCSRNRLCYSISCPRRLE 398
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = +2
Query: 308 FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTAS 457
++ ++ G+L W + + + FR H P++ + ++ G +L TAS
Sbjct: 90 WLAAGTEKGNLYIWSLKSGAL--IYFFRAHYQPLTILKFSNDGMVLFTAS 137
>SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1679
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +1
Query: 82 KEQPMTKKLLENVTVMIQKTGLDQCLQXAVKPKQKKRKVLEFETLYLENL 231
K P KK++ N ++ K L +C + PK K + F YL L
Sbjct: 1628 KNAPHLKKIMSNEEFLLYKDILYRCYEDNPSPKAKDYAEVIFGENYLSVL 1677
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,166,940
Number of Sequences: 5004
Number of extensions: 62657
Number of successful extensions: 235
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 234
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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