Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_M18
(894 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 156 2e-38
11_06_0263 + 21777178-21777342,21777742-21777823,21777939-217780... 38 0.011
10_01_0025 - 328105-328188,328281-328337,328680-328734,328809-32... 38 0.014
04_04_1592 - 34649484-34649547,34650118-34650186,34650325-346504... 37 0.019
10_08_0491 - 18283404-18283482,18283590-18283658,18283767-182838... 36 0.043
10_08_0316 - 16688911-16689044,16689141-16689211,16689303-166893... 35 0.076
01_01_0911 - 7176355-7176372,7176502-7176756,7177352-7177615,717... 35 0.10
03_02_1033 + 13550955-13551700,13552837-13553290,13553451-135536... 34 0.13
03_02_1031 + 13541327-13542072,13543209-13543662,13543823-135440... 34 0.13
05_04_0272 + 19624898-19625071,19625909-19626370,19626471-196269... 33 0.23
03_02_0099 - 5614007-5614233,5614725-5614998,5615086-5616179,561... 33 0.23
01_05_0439 - 22159425-22159520,22160137-22160345,22161028-221610... 33 0.31
12_01_0418 - 3304741-3304904,3305579-3305762,3307254-3307347,330... 33 0.40
06_03_0940 + 26145746-26145879,26146740-26146821,26147349-261474... 33 0.40
07_03_0153 - 14481421-14481506,14481933-14482111,14483046-144831... 32 0.54
02_02_0528 + 11199799-11200470,11201850-11201951,11202858-112034... 32 0.54
01_06_0959 - 33362810-33363125,33363309-33363475,33363583-333644... 32 0.71
07_03_1547 + 27623945-27625612 31 1.2
07_01_1005 + 8509777-8509968,8510059-8510205,8510326-8510544,851... 30 2.2
06_03_0967 - 26395537-26396590,26400918-26401111 29 5.0
04_04_1690 - 35382241-35382553,35382614-35382933,35383601-353851... 29 5.0
01_07_0036 + 40647046-40647100,40647120-40647571,40648135-406482... 29 5.0
07_01_0972 - 8176013-8176960 29 6.6
07_01_0444 + 3357048-3357425,3357841-3357969,3358165-3358284,335... 29 6.6
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 29 6.6
01_03_0084 - 12286416-12286514,12286632-12286683,12286771-122868... 29 6.6
09_06_0086 - 20763085-20763162,20763233-20763286,20763287-207639... 28 8.7
09_02_0533 - 10325681-10326211,10326260-10326328,10326758-103268... 28 8.7
04_04_0270 - 24061852-24063264 28 8.7
03_06_0003 + 30921197-30921388,30921514-30921632,30921742-309218... 28 8.7
01_06_0303 + 28324155-28325045,28326208-28326321 28 8.7
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 156 bits (379), Expect = 2e-38
Identities = 72/152 (47%), Positives = 99/152 (65%)
Frame = +2
Query: 275 IVTHVLVTKTDFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTA 454
+VTHV V+ D+ +T S DGHLKFWKK+ GIEF KHFR HL+PI +A + G L CT
Sbjct: 92 VVTHVAVSPADYFITGSADGHLKFWKKKPAGIEFAKHFRSHLSPIEGLAVSVDGLLCCTI 151
Query: 455 SPEKTIKVFDVVNFDMINMISIDFEPYRVEWVHSAGDPISALAVSDRNTNKIHVYDGTQA 634
S + ++K++DVVN+DM+ M+ + F P +EWV+ GD LAVSDRNT +H+YD
Sbjct: 152 SSDWSVKIYDVVNYDMMFMMRLPFVPGAIEWVYRQGDVKPKLAVSDRNTPFVHIYDTHSG 211
Query: 635 SGTPLHTFETLHQTAVAVIKYXPVFETAVSVD 730
S P+ + E +H V V+KY V + +S D
Sbjct: 212 SNDPIISKE-IHAGPVKVMKYNHVHDVVISAD 242
Score = 42.3 bits (95), Expect = 5e-04
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +1
Query: 169 VKPKQKKRKVLEFETLYLENLPSSETYERSFMHR 270
V P+ +K++ L+FE +L+ LPS+ YE+S+MHR
Sbjct: 57 VPPRPRKKRPLQFEQAFLDALPSAAMYEKSYMHR 90
>11_06_0263 +
21777178-21777342,21777742-21777823,21777939-21778028,
21778447-21778604,21778852-21778873,21779048-21779175,
21779486-21779685,21780600-21780663,21781594-21781704,
21781804-21781941,21782306-21782448,21782521-21782575,
21782921-21782977,21783093-21783176
Length = 498
Score = 37.9 bits (84), Expect = 0.011
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Frame = +2
Query: 215 YTWRICLHQKHMKEVSCTGXIVTHVLVTKT-DFVVTASQDGHLKFWKKQEEGI--EFVKH 385
+ W + ++ ++ +V HV + ++ +AS D +K W GI +FV
Sbjct: 367 FLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLASASFDKSVKLWN----GITGKFVAA 422
Query: 386 FRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVVNFDM-INMISIDFEPYRVEW 547
FR H+A + ++ ++ LL + S + T+KV+D+ + ++ E Y V+W
Sbjct: 423 FRGHVADVYQISWSADSRLLLSGSKDSTLKVWDIRTHKLKQDLPGHADEVYAVDW 477
>10_01_0025 -
328105-328188,328281-328337,328680-328734,328809-328951,
330772-330909,331010-331120,332621-332684,334179-334378,
334678-334805,335468-335593,335828-335917,336035-336116,
336845-336910
Length = 447
Score = 37.5 bits (83), Expect = 0.014
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Frame = +2
Query: 215 YTWRICLHQKHMKEVSCTGXIVTHVLVTKT-DFVVTASQDGHLKFWKKQEEGI--EFVKH 385
+ W + ++ ++ +V HV + ++ +AS D +K W GI +FV
Sbjct: 316 FLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLASASFDKSVKLWN----GITGKFVAA 371
Query: 386 FRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 487
FR H+A + ++ ++ LL + S + T+KV+D+
Sbjct: 372 FRGHVADVYQISWSADSRLLLSGSKDSTLKVWDI 405
>04_04_1592 -
34649484-34649547,34650118-34650186,34650325-34650444,
34650630-34650742,34650824-34650898,34651224-34651346,
34651427-34651446,34652354-34652410,34652922-34653860,
34653961-34654189,34654296-34654439,34654527-34654601,
34655363-34655433,34656103-34656205,34656407-34656633,
34656791-34656908,34657239-34657369,34657709-34657802
Length = 923
Score = 37.1 bits (82), Expect = 0.019
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +2
Query: 308 FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 487
+VV+ +D +K W + + F+CH I + + LL T S +KT+K +D+
Sbjct: 179 WVVSGGEDNVVKLWDLTAG--KLLHDFKCHEGQIQCIDFHPHEFLLATGSSDKTVKFWDL 236
Query: 488 VNFDMI 505
F++I
Sbjct: 237 ETFELI 242
>10_08_0491 -
18283404-18283482,18283590-18283658,18283767-18283883,
18283953-18284068,18284149-18284223,18284248-18284430,
18284530-18284591,18284668-18285606,18285723-18285846,
18285917-18286060,18286151-18286225,18286359-18286382,
18287025-18287095,18287305-18287407,18287555-18287781,
18287910-18288027,18288220-18288311,18288793-18288874
Length = 899
Score = 35.9 bits (79), Expect = 0.043
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +2
Query: 308 FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 487
++V+ D +K W + + FR H PI+ + + LL T S +KT+K +D+
Sbjct: 162 WIVSGGSDNSVKIWDLTAG--KLLHDFRNHEGPINCLDFHPHEFLLATGSADKTVKFWDL 219
Query: 488 VNFDMI 505
F++I
Sbjct: 220 ETFELI 225
>10_08_0316 -
16688911-16689044,16689141-16689211,16689303-16689354,
16689589-16689685,16689764-16689841,16689938-16690054,
16690172-16690276,16691026-16691100,16691297-16691356,
16691454-16691549,16691838-16691954,16692142-16692260,
16692349-16692490,16694204-16694290,16694852-16694914,
16695081-16695161
Length = 497
Score = 35.1 bits (77), Expect = 0.076
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 293 VTKTDFVVTASQDGHLKFWKKQEEG-IEFVKHFRCHLAPISHVAANSTGTLLCTASPEKT 469
V + + VT S D +K W+ EEG + + H A + V ++T TAS + T
Sbjct: 242 VPRDELFVTGSADKTVKIWQGSEEGNYNCIHTLKDHTAEVEAVTVHATQKYFVTASKDNT 301
Query: 470 IKVFDV 487
+D+
Sbjct: 302 WCFYDI 307
>01_01_0911 - 7176355-7176372,7176502-7176756,7177352-7177615,
7177691-7177810,7177910-7178041,7178136-7178252,
7178335-7178459,7178611-7178920,7179368-7179550,
7179643-7179787,7180126-7181355,7181454-7181563,
7181768-7182037,7182130-7182963
Length = 1370
Score = 34.7 bits (76), Expect = 0.10
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Frame = +2
Query: 236 HQKHMKEVSCTGX-IVTHVLVTKTDFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPIS 412
+ K + C+ VT + K ++ + DG LK W+ E + V + H I+
Sbjct: 1073 NHKELNHADCSSNGEVTSIAYFK-GYIFSGHSDGTLKVWEGSENILRLVHESQEHTKAIT 1131
Query: 413 HVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYRVEWVHSAGDPISALAVS 589
+A + L + S ++TI+V+ + D + + VH A DP+ +LAV+
Sbjct: 1132 SLAVLHSEEKLFSGSLDRTIRVWQL--RDALRCVE----------VHDAKDPVQSLAVA 1178
>03_02_1033 +
13550955-13551700,13552837-13553290,13553451-13553648,
13553726-13553807,13554496-13554590
Length = 524
Score = 34.3 bits (75), Expect = 0.13
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +2
Query: 305 DFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFD 484
D + TAS D K WK +G + F HL ++ +A + +G L TAS +KT +++D
Sbjct: 286 DCLATASADKTAKLWKT--DG-SLLLSFDGHLDRLARLAFHPSGGYLATASFDKTWRLWD 342
Query: 485 V 487
V
Sbjct: 343 V 343
>03_02_1031 +
13541327-13542072,13543209-13543662,13543823-13544020,
13544098-13544179,13544868-13544962
Length = 524
Score = 34.3 bits (75), Expect = 0.13
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +2
Query: 305 DFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFD 484
D + TAS D K WK +G + F HL ++ +A + +G L TAS +KT +++D
Sbjct: 286 DCLATASADKTAKLWKT--DG-SLLLSFDGHLDRLARLAFHPSGGYLATASFDKTWRLWD 342
Query: 485 V 487
V
Sbjct: 343 V 343
>05_04_0272 +
19624898-19625071,19625909-19626370,19626471-19626905,
19626992-19627237,19627318-19628085,19628245-19628417,
19629337-19629440,19629525-19630127,19630210-19630214
Length = 989
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 371 EFVKHFRCHLAPISHVAANSTGTLLCTASPE-KTIKVFDVV 490
E + FR H +PIS + + +GTLL TAS I VF ++
Sbjct: 367 EIISQFRAHTSPISALCFDPSGTLLVTASVHGHNINVFRIM 407
>03_02_0099 -
5614007-5614233,5614725-5614998,5615086-5616179,
5616674-5616772,5617371-5617389
Length = 570
Score = 33.5 bits (73), Expect = 0.23
Identities = 27/110 (24%), Positives = 49/110 (44%)
Frame = +2
Query: 329 DGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVVNFDMIN 508
+G W + GI H + API+ VA + G L ++ +K++ ++ VVN I
Sbjct: 44 NGTCVIWDFETRGIARELHDKDCTAPITSVAWSKYGHHLLASATDKSLTLWHVVNEKKIA 103
Query: 509 MISIDFEPYRVEWVHSAGDPISALAVSDRNTNKIHVYDGTQASGTPLHTF 658
I++ P V +H G ++ ++ ++ + D S T L F
Sbjct: 104 RITLQQTPLSVR-LHPGGPSTPSICLACPLSSAPILVDLNTGSTTVLPAF 152
>01_05_0439 - 22159425-22159520,22160137-22160345,22161028-22161066,
22161196-22161356,22161447-22161518,22162002-22162183,
22162580-22162703,22164196-22164299,22165526-22165725,
22165838-22166069,22166156-22166239,22166329-22166386,
22166724-22166771,22167924-22168081,22168451-22168501,
22168585-22168658,22168760-22168835,22169685-22169729,
22169833-22169899,22169978-22170095,22170580-22170775,
22171551-22171640,22171985-22172039,22172755-22172975,
22173362-22173454,22173608-22173721,22173918-22173981,
22174081-22174181,22174306-22174447,22174528-22174729,
22174883-22174976,22176172-22176348
Length = 1248
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 311 VVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAAN 427
++T S DG ++FW + E GI VK+ H A + ++A+
Sbjct: 1132 IITGSSDGLIRFW-ENEGGIRCVKNLTLHSASVLSISAS 1169
>12_01_0418 -
3304741-3304904,3305579-3305762,3307254-3307347,
3308530-3308882,3309140-3309274,3309354-3309392,
3309587-3309652,3309739-3309834,3310291-3310527,
3310602-3310722,3310854-3310889,3313062-3313159,
3313298-3313591,3313842-3313904,3314280-3314438,
3314557-3314655
Length = 745
Score = 32.7 bits (71), Expect = 0.40
Identities = 21/80 (26%), Positives = 38/80 (47%)
Frame = +2
Query: 236 HQKHMKEVSCTGXIVTHVLVTKTDFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISH 415
++KH ++C + T +D++ T S+DG LK W+ + F F H+ ++
Sbjct: 31 NKKHCAGINCLSYLNASTSGT-SDYLFTGSRDGTLKRWEPKNGVASFSATFESHVDWVND 89
Query: 416 VAANSTGTLLCTASPEKTIK 475
A G L + S + T+K
Sbjct: 90 --AIIVGQNLVSCSSDTTLK 107
>06_03_0940 +
26145746-26145879,26146740-26146821,26147349-26147427,
26147527-26147624,26148392-26148479,26148589-26148686,
26148881-26148982,26149237-26149281,26150535-26150574,
26150988-26151074,26151254-26151330,26151746-26151808,
26152650-26152766,26152905-26153116,26153690-26153785,
26153869-26153935,26154028-26154081
Length = 512
Score = 32.7 bits (71), Expect = 0.40
Identities = 25/137 (18%), Positives = 55/137 (40%)
Frame = +2
Query: 245 HMKEVSCTGXIVTHVLVTKTDFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAA 424
H+ +V C + HV +++ T S D ++ W Q E ++ F H + + +A
Sbjct: 365 HLSDVDC---VQWHV---NCNYIATGSSDKTVRLWDVQTG--ECIRMFIGHRSMVLSLAM 416
Query: 425 NSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYRVEWVHSAGDPISALAVSDRNTN 604
+ G + + + TI ++D+ + + + L D +TN
Sbjct: 417 SPDGRYMASGDEDGTIMMWDLSSGRCEGALLASGSADCTVKLWDVASSTKVLKTDDTSTN 476
Query: 605 KIHVYDGTQASGTPLHT 655
++ + + TP++T
Sbjct: 477 RLRMLKTLRTKSTPVYT 493
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/96 (20%), Positives = 42/96 (43%)
Frame = +2
Query: 224 RICLHQKHMKEVSCTGXIVTHVLVTKTDFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLA 403
+I L ++ + I+ H + +AS D + W + I+ ++ HL+
Sbjct: 310 QIILFNQYALPAIASVLILVHEFSPVGHYFASASHDRTARIWSMDK--IQPLRIMAGHLS 367
Query: 404 PISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINM 511
+ V + + T S +KT++++DV + I M
Sbjct: 368 DVDCVQWHVNCNYIATGSSDKTVRLWDVQTGECIRM 403
>07_03_0153 -
14481421-14481506,14481933-14482111,14483046-14483130,
14483301-14483499,14484222-14484292,14484380-14484486,
14484571-14484703,14484870-14485020,14485147-14485249,
14485330-14485438,14485587-14485746,14486293-14486394,
14486892-14487009,14487596-14487750,14487850-14487948,
14488078-14488167
Length = 648
Score = 32.3 bits (70), Expect = 0.54
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +2
Query: 386 FRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYRVEWVHSAGD 565
F+ H P+ ++ +TG + + S + TI+V++V I + ++ +R+ W S
Sbjct: 341 FKGHNGPVKSLSVEATGQWIASGSSDGTIRVWEVETGRCIKVWNVGGVVHRIAWNPSPDR 400
Query: 566 PISALAV 586
I A V
Sbjct: 401 HILAAVV 407
>02_02_0528 +
11199799-11200470,11201850-11201951,11202858-11203487,
11204287-11204547
Length = 554
Score = 32.3 bits (70), Expect = 0.54
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 308 FVVTASQDGHLKFWKKQEEGIEFVKH-FRCHLAPISHVAANSTGTLLCTASPEKTIKVFD 484
++ +AS D WK E+G +KH H P+ VA + L T E+ I+ +D
Sbjct: 244 YLASASNDKSAIIWKVDEDGELLLKHTLTGHDKPVMMVAWSPDDCQLLTCGMEEVIRCWD 303
Query: 485 V 487
V
Sbjct: 304 V 304
>01_06_0959 -
33362810-33363125,33363309-33363475,33363583-33364410,
33364483-33364719,33365455-33365871,33365951-33366412,
33367197-33367382
Length = 870
Score = 31.9 bits (69), Expect = 0.71
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 377 VKHFRCHLAPISHVAANSTGTLLCTASPE-KTIKVFDVV 490
V FR H +PIS + + +GTLL TAS + I VF ++
Sbjct: 367 VVQFRAHTSPISALCFDPSGTLLVTASIHGRNINVFRIL 405
>07_03_1547 + 27623945-27625612
Length = 555
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3
Query: 727 DGDSSFEDRXILDDRHRGLVQSLERVQRSARSLR 626
+G S R +LDD +RG +Q LER++R A R
Sbjct: 309 EGKSIRHFRTLLDDAYRGRIQYLERLERRAARSR 342
>07_01_1005 +
8509777-8509968,8510059-8510205,8510326-8510544,
8510652-8510761,8511337-8511391,8511447-8511631,
8512537-8512599,8513713-8513782,8514159-8514242,
8515925-8516159,8516213-8516517
Length = 554
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +2
Query: 311 VVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 487
+ TAS D W+ E V H + V+ +++G+LL T S +K++ ++++
Sbjct: 87 LATASFDSTTAIWEYSGGDFECVATLEGHENEVKSVSWSASGSLLATCSRDKSVWIWEM 145
>06_03_0967 - 26395537-26396590,26400918-26401111
Length = 415
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +2
Query: 311 VVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 487
+ + S D + W + ++ R H + + + GT + +ASP+KT++V+DV
Sbjct: 140 IASGSHDKDIFLWYVHGDCKNYMV-LRGHKNAVLDLQWTTDGTQIISASPDKTVRVWDV 197
>04_04_1690 - 35382241-35382553,35382614-35382933,35383601-35385164,
35385254-35385372,35385701-35385811,35386068-35386595,
35386702-35386881,35386957-35387556,35387646-35388066,
35388183-35388280,35388372-35389260,35389366-35389544,
35389647-35389763,35389862-35389952,35390578-35390753
Length = 1901
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 602 NKIHVYDGTQASGTPLHTFE 661
N++ V+D SG PLHTFE
Sbjct: 1571 NEVKVWDAFSVSGGPLHTFE 1590
>01_07_0036 +
40647046-40647100,40647120-40647571,40648135-40648257,
40648407-40648461,40648613-40648722,40649352-40649531,
40650003-40650101,40651182-40651280,40652195-40652289,
40652290-40652378,40652739-40652901,40653299-40653404,
40655647-40655829,40656059-40656286,40656373-40656486
Length = 716
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = -3
Query: 394 TSEVLYEFYTFFLFLPKFQMTILTCCYHKISFCDKYVCNN 275
TSE+ Y ++ F++ F +T+++CC + VC++
Sbjct: 389 TSEIDYYVWSCFVYSVPFLVTLISCCMTCALLLSRLVCDD 428
>07_01_0972 - 8176013-8176960
Length = 315
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 311 VVTASQDGHLKFWKKQEEGIEFV-KHFRCHLAPISHVAANSTGTLLCTASPEKTIKVF 481
+ +ASQDG + W + + G ++ K +P+ V+ + TG +L A+ E I ++
Sbjct: 228 IASASQDGKVVIWSRGKVGDKWEGKVMHDFGSPVWRVSWSLTGNILSVAAGENNITLW 285
>07_01_0444 +
3357048-3357425,3357841-3357969,3358165-3358284,
3358661-3358753,3358935-3359014,3359180-3359293,
3359530-3359603,3359757-3359833,3360558-3360641,
3360732-3360824,3360901-3361008,3361130-3361204,
3361507-3361911
Length = 609
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 461 LVMQCRVKYRCCLLRHGRLVLSDI*SALRILYLLLVSSKISNDHPDLL 318
L+ R Y+ C L HG L +I LY++ VS + DHP L
Sbjct: 356 LITTMRTLYQKCKLVHGDLSEYNILYFEGHLYIIDVSQSVDLDHPSAL 403
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 311 VVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 487
+V+ +D +K W + G E ++ F H + V N G + TAS ++ IK++D+
Sbjct: 283 LVSGGKDYLVKLWDAKS-GRE-LRSFHGHKNIVQCVKWNQNGNWVLTASKDQIIKLYDI 339
>01_03_0084 -
12286416-12286514,12286632-12286683,12286771-12286871,
12287498-12287650,12287703-12287762,12287872-12287998,
12288581-12288708,12289196-12289291,12289473-12289526,
12289603-12289689,12290954-12291057,12291163-12291246,
12291374-12291422,12291523-12291886,12292186-12292226
Length = 532
Score = 28.7 bits (61), Expect = 6.6
Identities = 22/97 (22%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Frame = +2
Query: 371 EFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVVNFDMIN-------MISIDFE 529
+ +K FR H + ++ ++ G+ + TAS + T+KV+D D + + +++
Sbjct: 344 KMLKEFRGHNSYVNCAIFSTDGSRVITASSDCTVKVWDTKTTDCLQTFKPPPPLRALNHA 403
Query: 530 PYRVEWVH-SAGD-PISALAVSDRNTNKIHVYDGTQA 634
Y + +H GD ++++ +S +N++ I V + T +
Sbjct: 404 SYLMVVLHFQGGDATVNSVHLSPKNSDHIIVCNKTSS 440
>09_06_0086 -
20763085-20763162,20763233-20763286,20763287-20763975,
20764173-20764324,20764404-20764604,20764920-20765064,
20765552-20765588,20765880-20765965,20766093-20766329,
20766501-20766609,20767025-20767135
Length = 632
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 230 CLHQKHMKEVSCTGXIVTHVLVTKTDFVVTASQDGHLKFWKKQEEGIEFVKHFR 391
C +QK EV G + H+L++ F S D H F EE E + HFR
Sbjct: 248 CFNQKVGAEVYNYGSRIDHILISGACFHHCGSVDDHSIFPCHVEE-CEIMDHFR 300
>09_02_0533 -
10325681-10326211,10326260-10326328,10326758-10326855,
10326968-10327117,10327848-10327976,10328063-10328999
Length = 637
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 626 CRRTRESYLCFCPRQLKLRWGHQRNAPTP 540
C T S++C CPR G++RNA TP
Sbjct: 329 CNNTPGSHICDCPR------GYERNASTP 351
>04_04_0270 - 24061852-24063264
Length = 470
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 395 HLAPISHVAANSTGTLLCTASPEKTIKVFDV 487
H +S VAA++ G LL + S +KT+KV+ V
Sbjct: 223 HADAVSGVAASADGRLLFSVSWDKTLKVWAV 253
>03_06_0003 +
30921197-30921388,30921514-30921632,30921742-30921811,
30922078-30922161,30922258-30922344,30922431-30922501,
30922648-30922702,30923374-30923509,30925009-30925103,
30925203-30925357,30925435-30925543,30925761-30925817,
30925913-30926027,30926177-30926264,30926738-30927501,
30927600-30927688,30928315-30928422,30928550-30928657,
30928887-30928977,30929235-30929287,30929557-30929712,
30930763-30930825,30931491-30931535,30932075-30932130,
30933051-30933132,30933238-30933354,30933428-30933530,
30933912-30934062,30934180-30934417,30934564-30934764,
30934850-30934935,30935036-30935135
Length = 1347
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +2
Query: 401 APISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMI 514
A I+ V +STG+L TAS + +++++D ++ + + I
Sbjct: 299 AAINQVRYSSTGSLYVTASKDGSLRIWDGISAECVRPI 336
>01_06_0303 + 28324155-28325045,28326208-28326321
Length = 334
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +2
Query: 287 VLVTKTDFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEK 466
VL + F ++ S DG L+ W G+ + F H + VA + + +AS ++
Sbjct: 82 VLSSDGQFALSGSWDGELRLW-DLSTGVT-TRRFVGHDKDVLSVAFSVDNRQIVSASRDR 139
Query: 467 TIKVFDVV 490
TIK+++ +
Sbjct: 140 TIKLWNTL 147
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,692,146
Number of Sequences: 37544
Number of extensions: 410796
Number of successful extensions: 1170
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -