Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_M18
         (894 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    24   1.6  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    24   2.2  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    24   2.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.8  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    23   5.0  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   5.0  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    22   6.6  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    22   6.6  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    22   6.6  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    22   6.6  

>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 669 CRVSNVCSGVPEACVPSYT*ILFVFLSETA 580
           CR  + CS  P A   SY  + F+++  +A
Sbjct: 113 CRNFSTCSSHPTAAFISYGTLFFIYVQPSA 142


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 669 CRVSNVCSGVPEACVPSYT*ILFVFLSETA 580
           CR  + CS  P A   SY  + F+++  +A
Sbjct: 114 CRNFSTCSSHPTAAFISYGTLFFIYVHPSA 143


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 572 SALAVSDRNTNKIHVYDGTQASGTPLHT 655
           SAL   D   N +H+ + T A G  + T
Sbjct: 259 SALVSKDSKFNMVHIQNSTLAGGVAIGT 286


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 805 VXXNLTVLGNCIXXXDPSSXRXC 737
           V   LT+ GN I   DP + R C
Sbjct: 408 VLNRLTLSGNAIASIDPLAFRNC 430


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 571 LSFSCLGQKHK*DSRVRR 624
           ++F CL + +K DSRV R
Sbjct: 369 ITFRCLEENNKIDSRVTR 386


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/41 (21%), Positives = 20/41 (48%)
 Frame = -1

Query: 528 SKSIDIMLIISKLTTSNTFIVFSGDAVQSKVPVLFAATWEI 406
           ++ + ++  +  L   N+ + FS      K+PV  A  W++
Sbjct: 525 ARLLSVLTELRTLGNQNSEMCFSLKFKNKKLPVFLAEIWDV 565


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -2

Query: 260 KLLSYVSDEGKFSRYSVSNSNTF 192
           K++S +S+  K+S Y+  N+N +
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNY 102


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -2

Query: 260 KLLSYVSDEGKFSRYSVSNSNTF 192
           K++S +S+  K+S Y+  N+N +
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNY 102


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -2

Query: 260 KLLSYVSDEGKFSRYSVSNSNTF 192
           K++S +S+  K+S Y+  N+N +
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNY 102


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -2

Query: 260 KLLSYVSDEGKFSRYSVSNSNTF 192
           K++S +S+  K+S Y+  N+N +
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNY 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,663
Number of Sequences: 438
Number of extensions: 4087
Number of successful extensions: 23
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)