Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_M17
         (868 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL138972-3|CAB72286.1| 2447|Drosophila melanogaster EG:BACR25B3....    30   4.7  
AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan pro...    30   4.7  
AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB...    30   4.7  
AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD...    30   4.7  
AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA...    30   4.7  
AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE...    30   4.7  
AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC...    30   4.7  
AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF...    30   4.7  

>AL138972-3|CAB72286.1| 2447|Drosophila melanogaster EG:BACR25B3.1
            protein.
          Length = 2447

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -1

Query: 616  MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 449
            M  + +RP      +L +Y V+   C +TG P  T+    R++W  +P +CE + +
Sbjct: 1338 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1390


>AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan protein.
          Length = 4223

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -1

Query: 616  MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 449
            M  + +RP      +L +Y V+   C +TG P  T+    R++W  +P +CE + +
Sbjct: 1329 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1381


>AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB,
            isoform B protein.
          Length = 3215

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -1

Query: 616  MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 449
            M  + +RP      +L +Y V+   C +TG P  T+    R++W  +P +CE + +
Sbjct: 1223 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1275


>AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD,
            isoform D protein.
          Length = 4223

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -1

Query: 616  MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 449
            M  + +RP      +L +Y V+   C +TG P  T+    R++W  +P +CE + +
Sbjct: 1329 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1381


>AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA,
            isoform A protein.
          Length = 4179

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -1

Query: 616  MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 449
            M  + +RP      +L +Y V+   C +TG P  T+    R++W  +P +CE + +
Sbjct: 1223 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1275


>AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE,
            isoform E protein.
          Length = 4228

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -1

Query: 616  MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 449
            M  + +RP      +L +Y V+   C +TG P  T+    R++W  +P +CE + +
Sbjct: 1223 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1275


>AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC,
            isoform C protein.
          Length = 4117

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -1

Query: 616  MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 449
            M  + +RP      +L +Y V+   C +TG P  T+    R++W  +P +CE + +
Sbjct: 1223 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1275


>AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF,
            isoform F protein.
          Length = 4629

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -1

Query: 616  MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 449
            M  + +RP      +L +Y V+   C +TG P  T+    R++W  +P +CE + +
Sbjct: 1735 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1787


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,869,613
Number of Sequences: 53049
Number of extensions: 771904
Number of successful extensions: 1799
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1799
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4188579408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)