Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_M11
         (861 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0495 + 34323082-34323173,34323600-34323742,34324265-343243...    48   1e-05
03_02_0515 - 9046450-9046996,9047125-9047227,9047319-9047540,904...    44   1e-04
09_04_0708 + 19648511-19648808,19649189-19649280,19650850-196510...    43   3e-04
09_04_0569 + 18600750-18602117                                         28   8.3  

>03_06_0495 +
           34323082-34323173,34323600-34323742,34324265-34324315,
           34324405-34324626,34324731-34324833,34325156-34325552,
           34326564-34326735,34326995-34327089,34327246-34327455
          Length = 494

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 25/110 (22%), Positives = 58/110 (52%)
 Frame = +3

Query: 372 LMMKDANSLXDALKSLTVNIAEVLLNAIRILTNTERIRSIQFGEPLPEDVQAAFDNVLEY 551
           L  +D     +A+++ T+++ + +    +++   + +  +Q     PE+++   D + E+
Sbjct: 30  LSEEDKKWFMEAMQANTMDVVKRMKEITQVMKTPDDV--LQSQGVTPENIEDMLDELQEH 87

Query: 552 IDDIDTANDFYKMGGXAMFPICYGSENEKVRALASTVLAELCQNNPFCQE 701
           ++ ID AND + +GG         + +  +RA A+ V++ + QNNP  Q+
Sbjct: 88  VESIDMANDLHSIGGLDPLLGYLKNSHAGIRAKAAEVVSTIVQNNPKSQQ 137


>03_02_0515 -
           9046450-9046996,9047125-9047227,9047319-9047540,
           9048350-9048400,9048966-9049168,9049276-9049361
          Length = 403

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 19/64 (29%), Positives = 35/64 (54%)
 Frame = +3

Query: 510 PEDVQAAFDNVLEYIDDIDTANDFYKMGGXAMFPICYGSENEKVRALASTVLAELCQNNP 689
           P+D++     +  +++ ID AND + +GG         + N ++RA A+ V+  + QNNP
Sbjct: 92  PDDIEGLLAELQVHVESIDMANDLHSVGGLVPVIKYLRNSNARIRARAADVVTTVVQNNP 151

Query: 690 FCQE 701
             Q+
Sbjct: 152 TSQQ 155


>09_04_0708 +
           19648511-19648808,19649189-19649280,19650850-19651000,
           19651779-19651906,19652099-19652257,19652325-19652507,
           19652978-19653178,19653269-19653289
          Length = 410

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 22/64 (34%), Positives = 33/64 (51%)
 Frame = +3

Query: 513 EDVQAAFDNVLEYIDDIDTANDFYKMGGXAMFPICYGSENEKVRALASTVLAELCQNNPF 692
           ED Q A   +L  ++ ID AND  K+GG         + NE++R  ++ VL +  QNN  
Sbjct: 160 EDRQRALQELLILVEPIDNANDLDKLGGLVAVIQDLNNANEEIRTTSAWVLGKASQNNAL 219

Query: 693 CQEK 704
            Q +
Sbjct: 220 VQNQ 223


>09_04_0569 + 18600750-18602117
          Length = 455

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 717 PYXKTSPGRTDCSDRAQPGPYWRGHGPSHFR 625
           P   TS   + CS  + P P  +GHG S  R
Sbjct: 183 PSASTSTSSSSCSATSSPPPQLQGHGRSQLR 213


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,218,845
Number of Sequences: 37544
Number of extensions: 339560
Number of successful extensions: 843
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)