Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_M11
         (861 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132951-2|CAC44305.1|  561|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z81102-2|CAB03203.1|  313|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AL132902-8|CAC14423.2|  699|Caenorhabditis elegans Hypothetical ...    28   9.8  

>AL132951-2|CAC44305.1|  561|Caenorhabditis elegans Hypothetical
           protein Y67H2A.4a protein.
          Length = 561

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +3

Query: 441 LLNAIRILTNTERIRSIQFGEPLPEDVQAAFDNVLEYIDDIDTANDFYKMGGXAM 605
           +L  ++     E ++ I FGE        AF   L +IDD+D A  F+KM G ++
Sbjct: 428 MLKRVKRRFKGENLKGISFGET------KAFFEFLYHIDDVDIALHFHKMAGMSI 476


>Z81102-2|CAB03203.1|  313|Caenorhabditis elegans Hypothetical
           protein M02B1.4 protein.
          Length = 313

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +1

Query: 433 LKCY*TPSEFSPILRGFVAYSLGNHYQKTYRRLLTMSLNILTILIQQM 576
           L  Y  P+ F P+L G  A+ +GN +    + L+ +S+    ++   M
Sbjct: 176 LSDYGAPNYFMPVLVGLTAHLIGNRFDNNRKALVGLSVGSAVLVSLSM 223


>AL132902-8|CAC14423.2|  699|Caenorhabditis elegans Hypothetical
           protein Y71A12B.9 protein.
          Length = 699

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 22/63 (34%), Positives = 28/63 (44%)
 Frame = -3

Query: 553 IYSRTLSKAACTSSGSGSPNCMLRILSVLVRILMAFSNTSAMFTVRLFRASXKEFASFII 374
           I+  TLS    TSSGSG       I +   R +    NT  M  V    AS  EF  +I+
Sbjct: 349 IHDVTLSSTNSTSSGSGGATSSSEI-AYRPRGMRNVGNTCFMNAVLQALASISEFREYIM 407

Query: 373 NWS 365
           + S
Sbjct: 408 SLS 410


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,691,785
Number of Sequences: 27780
Number of extensions: 311761
Number of successful extensions: 793
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)