Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_M09
(876 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0961 + 12759701-12760054,12760294-12760420,12760719-127611... 33 0.30
03_06_0631 + 35193737-35193906,35194010-35194076,35194237-351944... 33 0.40
03_01_0356 + 2793565-2793811,2793879-2793980,2794387-2794529,279... 32 0.52
02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783 31 0.92
07_03_1762 - 29299328-29299437,29299782-29299871,29300487-293012... 31 1.2
07_03_0179 + 14801037-14801108,14801325-14802788 29 3.7
12_01_0921 - 9102983-9103360,9104505-9104606,9104709-9104801,910... 29 4.9
04_01_0204 + 2467657-2467781,2467955-2468044,2469071-2469169,246... 29 4.9
11_03_0078 - 9662677-9663642,9666589-9666747 29 6.5
08_02_1079 + 24190453-24190483,24191201-24191475,24191619-241919... 29 6.5
08_02_0985 + 23299996-23300208,23300355-23300520,23300790-233010... 29 6.5
06_01_0601 + 4337575-4340149,4340566-4340978 29 6.5
02_02_0279 - 8507603-8507620,8508040-8508060,8508613-8508835,850... 29 6.5
08_02_1244 - 25537090-25537467,25538612-25538713,25538816-255389... 28 8.5
03_06_0326 + 33150599-33150907,33151013-33151104,33151961-331520... 28 8.5
>03_02_0961 +
12759701-12760054,12760294-12760420,12760719-12761167,
12761369-12761590,12761672-12761980,12762092-12762430,
12762504-12762584,12762661-12762756,12762846-12763220,
12763400-12763531,12763962-12764132
Length = 884
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 464 GEFRKVLIYQAHMRSEEVGPEDEIPADESEYLEEDPDFGDDEPLKRE 604
G + V Y+ S+ ++++P+DE E +EED D G+DE +++
Sbjct: 99 GRYDAVEKYEYEFDSDASNADEDVPSDEGEDMEED-DAGEDEDEEKQ 144
>03_06_0631 +
35193737-35193906,35194010-35194076,35194237-35194426,
35194571-35194767
Length = 207
Score = 32.7 bits (71), Expect = 0.40
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 515 VGPEDEIPADESEYLEEDPDFGDDEPLKREEPQPTVSAEPL 637
V E E+ E E +EE+ + ++E + E+PQP V + PL
Sbjct: 13 VQEEKELEEKEEEEVEEEDENEEEEEEEEEDPQPYVPSRPL 53
>03_01_0356 +
2793565-2793811,2793879-2793980,2794387-2794529,
2795210-2795297,2795444-2795787
Length = 307
Score = 32.3 bits (70), Expect = 0.52
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 542 DESEYLEEDPDFGDDEPLKREEPQPTVSAEPLQIKGKRG 658
D +Y+++D D+GDDEP P + + ++I GK G
Sbjct: 41 DHHQYMDDDDDYGDDEP--PSNPLDSYREDWVEIYGKTG 77
>02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783
Length = 1439
Score = 31.5 bits (68), Expect = 0.92
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 506 SEEVGPEDEIPADESEYLEEDPDFGDDEPLKREEP 610
S+E G E+E+ +E E EE+ D DDE + EEP
Sbjct: 450 SDEEGDEEELEEEEEEEEEEEDDDDDDE--EEEEP 482
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2
Query: 494 AHMRSEEVGPEDEIPADESEYLEEDPDFGDDEPLKREEPQ 613
A + EE+G +++ +D+S+ D + GD+E L+ EE +
Sbjct: 427 AEIEEEELGTDEDETSDDSDENFSDEE-GDEEELEEEEEE 465
>07_03_1762 -
29299328-29299437,29299782-29299871,29300487-29301291,
29301956-29303278
Length = 775
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +2
Query: 491 QAHMRSEEVGPEDEI-----PADESEYLEEDPDFGDDEPLKREEPQPTVSAEPLQIKGKR 655
+A ++ +V PE ++ PA ES+ E + D+E +E P +AEP + KGK+
Sbjct: 246 KAARKTRDVTPEPDVEASAWPAVESDTSEFEFVTSDEEAADKEAP----AAEPAKTKGKK 301
Query: 656 GR 661
GR
Sbjct: 302 GR 303
>07_03_0179 + 14801037-14801108,14801325-14802788
Length = 511
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 503 RSEEVGPEDEIPADESEYLEEDPDFGDDEPLKREEPQ 613
RSE V PE EI +ES ++E +PD D + +EP+
Sbjct: 101 RSEAV-PEVEIIHEESLHVESEPDSTADSSSQSQEPE 136
>12_01_0921 -
9102983-9103360,9104505-9104606,9104709-9104801,
9104875-9105087,9105172-9105412,9105501-9105859,
9106006-9106218
Length = 532
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Frame = +2
Query: 539 ADESEYLEEDPDFG----DDEPLKREEPQPTVSAEPLQIKGKR 655
+D SE+L ED + G DD L+ E+P P + P Q + K+
Sbjct: 38 SDTSEFLPEDDEQGVQCDDDSYLEAEQPVPIMIEYPRQTRRKK 80
>04_01_0204 +
2467657-2467781,2467955-2468044,2469071-2469169,
2469353-2469371,2469965-2470021,2470585-2471265,
2471639-2471742,2471919-2472057,2472173-2472334,
2472565-2472681
Length = 530
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -1
Query: 486 INTFLNSPLATMSMNFFSHSNTCFLKLHASRSLVMQTSQISL-FGPFGPSFI 334
I+ + S T+S N+F+H N L H+ + + Q+++ F FG I
Sbjct: 336 IDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYVKDKAMQVTIAFNHFGEGLI 387
>11_03_0078 - 9662677-9663642,9666589-9666747
Length = 374
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 509 EEVGPEDEIPADESEYLEEDPDFGDDEPLKREE 607
EEV E+ +P E +E+ + GDD L EE
Sbjct: 248 EEVNVEENVPVREEGDVEDGREVGDDVELPEEE 280
>08_02_1079 +
24190453-24190483,24191201-24191475,24191619-24191977,
24192066-24192306,24192391-24192603,24192677-24192769,
24192872-24192973,24194104-24194481
Length = 563
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Frame = +2
Query: 539 ADESEYLEEDPDFG----DDEPLKREEPQPTVSAEPLQIKGKR 655
+D SE+L ED + G DD L+ E+P P + P Q + K+
Sbjct: 69 SDTSEFLPEDDEQGVQCDDDSYLEPEQPVPIMIEYPRQTRRKK 111
>08_02_0985 +
23299996-23300208,23300355-23300520,23300790-23301043,
23301128-23301340,23301414-23301506,23301609-23301710,
23302852-23303229
Length = 472
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Frame = +2
Query: 539 ADESEYLEEDPDFG----DDEPLKREEPQPTVSAEPLQIKGKR 655
+D SE+L ED + G DD L+ E+P P + P Q + K+
Sbjct: 38 SDTSEFLPEDDEQGVQCDDDSYLEPEQPVPIMIEYPRQTRRKK 80
>06_01_0601 + 4337575-4340149,4340566-4340978
Length = 995
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 627 LSPYRSKGNVADQRNNQMPSLRKRNXIRTT 716
+SP+ S G V D+RN++ P + R + T
Sbjct: 622 VSPHLSSGGVMDERNSEHPRISHRELVDAT 651
>02_02_0279 -
8507603-8507620,8508040-8508060,8508613-8508835,
8509204-8509553,8509631-8509729,8509811-8510105,
8510200-8510405,8510498-8510689,8510766-8511163,
8511258-8511444,8511473-8511528,8511800-8511872,
8512012-8512872,8514353-8514778
Length = 1134
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 509 EEVGPEDEIPADESEYLEEDPDFGDDEPLKREE 607
EEV E+ +P E +E+ + GDD L EE
Sbjct: 337 EEVNVEENVPVREEGDVEDGREVGDDVELPEEE 369
>08_02_1244 -
25537090-25537467,25538612-25538713,25538816-25538908,
25538982-25539194,25539279-25539532,25539801-25539966,
25540114-25540326
Length = 472
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Frame = +2
Query: 539 ADESEYLEEDPDFG----DDEPLKREEPQPTVSAEPLQIKGKR 655
+D SE+L ED + G DD L+ E+P P + P Q + K+
Sbjct: 38 SDTSEFLPEDDEQGVQCDDDSYLEPEQPIPIMIEYPRQTRRKK 80
>03_06_0326 +
33150599-33150907,33151013-33151104,33151961-33152057,
33152585-33152656,33152750-33152812,33152905-33153045,
33153603-33153698,33154120-33154404,33154692-33154851,
33154947-33155089,33155688-33155861,33156386-33156652,
33156737-33156856
Length = 672
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 524 EDEIPADESEYLE-EDPDFGDDEPLKREEPQP 616
EDEI A E + +D D DDE KR P+P
Sbjct: 416 EDEIDAKEKDATHIDDDDDDDDEDDKRYSPEP 447
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,549,010
Number of Sequences: 37544
Number of extensions: 402145
Number of successful extensions: 1248
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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