Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_M09
         (876 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          25   1.2  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   4.9  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   6.5  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 209 RDSPSPQYRQTPSLYHDSNITITNKVPY 126
           +D  SP + Q+PS  H S   + +++PY
Sbjct: 624 QDGSSPHFHQSPSQNHSS--AVPDQMPY 649


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 434 EKKFIDMVARGEFRKVLIYQAHMRSEEVGPEDEIP 538
           EK +  ++ +  F +  +YQ+H+RS   G E E P
Sbjct: 59  EKTYQCLLCQKAFDQKNLYQSHLRSH--GKEGEDP 91


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 738 KYKYRTSPSXRCLXSGGSTTCP 803
           KY Y T+ S  CL +GGS   P
Sbjct: 125 KY-YTTNESHACLSTGGSCYWP 145


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,878
Number of Sequences: 438
Number of extensions: 4317
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)