BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_M07
(812 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058385-1|AAL13614.1| 323|Drosophila melanogaster GH14710p pro... 157 2e-38
AE014297-1948|AAN13631.1| 323|Drosophila melanogaster CG4196-PC... 157 2e-38
AE014297-1947|AAN13630.1| 323|Drosophila melanogaster CG4196-PB... 157 2e-38
AE013599-2550|AAF57800.1| 399|Drosophila melanogaster CG14487-P... 29 10.0
>AY058385-1|AAL13614.1| 323|Drosophila melanogaster GH14710p
protein.
Length = 323
Score = 157 bits (380), Expect = 2e-38
Identities = 71/118 (60%), Positives = 91/118 (77%)
Frame = +2
Query: 326 ERTALQGNFWQGFLASLSVVIVSELGDKTFFIAAIMAMKHPRIIVFAGAISALVFMAILS 505
+R +G F F AS+SV++++ELGDKTFFIAAIMAM+HPR+IVF GAI+AL M +LS
Sbjct: 86 DRPKTKGTFIDAFTASISVILLTELGDKTFFIAAIMAMRHPRLIVFGGAIAALALMTVLS 145
Query: 506 AAFGWIATVIPRVYTYYVSAALFAIFGIKMLRDGWKMDPNEGQEXLEEVXXELKRXED 679
AFG A IP++YTYY+S ALF IFG+KML DG+KM P + QE LEEV +L++ ED
Sbjct: 146 CAFGMAANFIPKIYTYYISTALFLIFGLKMLYDGYKMKPTDAQEELEEVQTDLRKRED 203
>AE014297-1948|AAN13631.1| 323|Drosophila melanogaster CG4196-PC,
isoform C protein.
Length = 323
Score = 157 bits (380), Expect = 2e-38
Identities = 71/118 (60%), Positives = 91/118 (77%)
Frame = +2
Query: 326 ERTALQGNFWQGFLASLSVVIVSELGDKTFFIAAIMAMKHPRIIVFAGAISALVFMAILS 505
+R +G F F AS+SV++++ELGDKTFFIAAIMAM+HPR+IVF GAI+AL M +LS
Sbjct: 86 DRPKTKGTFIDAFTASISVILLTELGDKTFFIAAIMAMRHPRLIVFGGAIAALALMTVLS 145
Query: 506 AAFGWIATVIPRVYTYYVSAALFAIFGIKMLRDGWKMDPNEGQEXLEEVXXELKRXED 679
AFG A IP++YTYY+S ALF IFG+KML DG+KM P + QE LEEV +L++ ED
Sbjct: 146 CAFGMAANFIPKIYTYYISTALFLIFGLKMLYDGYKMKPTDAQEELEEVQTDLRKRED 203
>AE014297-1947|AAN13630.1| 323|Drosophila melanogaster CG4196-PB,
isoform B protein.
Length = 323
Score = 157 bits (380), Expect = 2e-38
Identities = 71/118 (60%), Positives = 91/118 (77%)
Frame = +2
Query: 326 ERTALQGNFWQGFLASLSVVIVSELGDKTFFIAAIMAMKHPRIIVFAGAISALVFMAILS 505
+R +G F F AS+SV++++ELGDKTFFIAAIMAM+HPR+IVF GAI+AL M +LS
Sbjct: 86 DRPKTKGTFIDAFTASISVILLTELGDKTFFIAAIMAMRHPRLIVFGGAIAALALMTVLS 145
Query: 506 AAFGWIATVIPRVYTYYVSAALFAIFGIKMLRDGWKMDPNEGQEXLEEVXXELKRXED 679
AFG A IP++YTYY+S ALF IFG+KML DG+KM P + QE LEEV +L++ ED
Sbjct: 146 CAFGMAANFIPKIYTYYISTALFLIFGLKMLYDGYKMKPTDAQEELEEVQTDLRKRED 203
>AE013599-2550|AAF57800.1| 399|Drosophila melanogaster CG14487-PA
protein.
Length = 399
Score = 28.7 bits (61), Expect = 10.0
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -3
Query: 261 EITHVAAKTPAARHILL--LFNILDIVSRMLQLIVFLNNVRLQITVL 127
E+THV P AR I + ++ IL S M IV +++ L + +L
Sbjct: 90 EVTHVCLMVPVARRIPIKDIYFILSSASNMFLAIVIVSSYGLALNLL 136
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,180,534
Number of Sequences: 53049
Number of extensions: 602225
Number of successful extensions: 1457
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1454
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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