Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_M07
         (812 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024813-5|AAK27883.1|  255|Caenorhabditis elegans Hypothetical ...   151   6e-37
AC024813-4|AAK27882.1|  297|Caenorhabditis elegans Hypothetical ...   151   6e-37
U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical pr...    28   6.9  

>AC024813-5|AAK27883.1|  255|Caenorhabditis elegans Hypothetical
           protein Y54F10AL.1b protein.
          Length = 255

 Score =  151 bits (366), Expect = 6e-37
 Identities = 67/110 (60%), Positives = 84/110 (76%)
 Frame = +2

Query: 347 NFWQGFLASLSVVIVSELGDKTFFIAAIMAMKHPRIIVFAGAISALVFMAILSAAFGWIA 526
           +F+ GFLAS SV++VSELGDKT+FIA IM+M+H R+ VF+GA+ AL  M +LSA  GWI 
Sbjct: 64  SFYHGFLASFSVIVVSELGDKTWFIAVIMSMRHSRLTVFSGAMGALALMTVLSACLGWIT 123

Query: 527 TVIPRVYTYYVSAALFAIFGIKMLRDGWKMDPNEGQEXLEEVXXELKRXE 676
            VIPR  TYY+S ALFA+FG+KML +GW M PNEGQE  EE   E+ + E
Sbjct: 124 QVIPRAVTYYLSTALFALFGLKMLHEGWTMSPNEGQEGYEEAQAEVAKRE 173


>AC024813-4|AAK27882.1|  297|Caenorhabditis elegans Hypothetical
           protein Y54F10AL.1a protein.
          Length = 297

 Score =  151 bits (366), Expect = 6e-37
 Identities = 67/110 (60%), Positives = 84/110 (76%)
 Frame = +2

Query: 347 NFWQGFLASLSVVIVSELGDKTFFIAAIMAMKHPRIIVFAGAISALVFMAILSAAFGWIA 526
           +F+ GFLAS SV++VSELGDKT+FIA IM+M+H R+ VF+GA+ AL  M +LSA  GWI 
Sbjct: 64  SFYHGFLASFSVIVVSELGDKTWFIAVIMSMRHSRLTVFSGAMGALALMTVLSACLGWIT 123

Query: 527 TVIPRVYTYYVSAALFAIFGIKMLRDGWKMDPNEGQEXLEEVXXELKRXE 676
            VIPR  TYY+S ALFA+FG+KML +GW M PNEGQE  EE   E+ + E
Sbjct: 124 QVIPRAVTYYLSTALFALFGLKMLHEGWTMSPNEGQEGYEEAQAEVAKRE 173


>U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical
           protein R03G5.3 protein.
          Length = 1311

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -2

Query: 649 LLQXLLTFVWVHFPAVPQHFDAEYREQGRADVVR 548
           LLQ LLTFV+  FP     F++ YR+    ++VR
Sbjct: 576 LLQALLTFVFCGFP--DSIFESWYRDMKHLEIVR 607


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,915,770
Number of Sequences: 27780
Number of extensions: 305579
Number of successful extensions: 750
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)