Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_L24
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ278684-2|CAB99192.1|  989|Drosophila melanogaster endonuclease...    36   0.099
BT023224-1|AAY55640.1|  103|Drosophila melanogaster IP02862p pro...    31   2.1  
AE014298-1837|ABI30979.1|  653|Drosophila melanogaster CG15720-P...    29   8.6  
AE014298-1836|AAF48220.1|  583|Drosophila melanogaster CG15720-P...    29   8.6  

>AJ278684-2|CAB99192.1|  989|Drosophila melanogaster
            endonuclease/reverse transcriptase protein.
          Length = 989

 Score = 35.5 bits (78), Expect = 0.099
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
 Frame = +3

Query: 444  RLADHVQGERTVEMIRPVLSDWVNRHRGRLTFLTTQVLTGHCCFPP--GRKPKPECXHCR 617
            R  +  +G  T ++I P L++W +     + +  TQ LT H CF     R    +   C 
Sbjct: 856  RWQESQRGRWTYKLI-PQLTEWADCEHKTVDYHMTQFLTDHGCFRGYLCRFRHVDTAQCL 914

Query: 618  GCDE--DTAEHMFAYCP-XCEXRTELV 689
             C +  +TAEH+  +C    E R +LV
Sbjct: 915  YCTDAVETAEHILLHCSRFAEERAQLV 941


>BT023224-1|AAY55640.1|  103|Drosophila melanogaster IP02862p
           protein.
          Length = 103

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -2

Query: 221 RKLCDSTCACVRVLKTPASRTVPRGQKTTKYRKQSFVS 108
           R+ C ++  C  V  T   + VP  +K TK+RK+S +S
Sbjct: 61  REGCGTSRICAVVFATDCVKEVPLRKKPTKWRKESLIS 98


>AE014298-1837|ABI30979.1|  653|Drosophila melanogaster CG15720-PB,
           isoform B protein.
          Length = 653

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = -2

Query: 641 LRRVLVTAPAVXALRFRLPSGRETTVSCEHLRRQEGEASSVAIHPVRED-RADHFDG 474
           +RR   T   + A  FR  S  E  + C + RRQ  ++  V  +  R D  A   DG
Sbjct: 476 IRRQSTTEEILIARGFRRQSTTEEMIRCRNFRRQSSQSDDVCRYRGRRDSSAQIIDG 532


>AE014298-1836|AAF48220.1|  583|Drosophila melanogaster CG15720-PA,
           isoform A protein.
          Length = 583

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = -2

Query: 641 LRRVLVTAPAVXALRFRLPSGRETTVSCEHLRRQEGEASSVAIHPVRED-RADHFDG 474
           +RR   T   + A  FR  S  E  + C + RRQ  ++  V  +  R D  A   DG
Sbjct: 501 IRRQSTTEEILIARGFRRQSTTEEMIRCRNFRRQSSQSDDVCRYRGRRDSSAQIIDG 557


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,978,365
Number of Sequences: 53049
Number of extensions: 811361
Number of successful extensions: 2163
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2163
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)