Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_L23
(900 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 288 4e-78
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 286 2e-77
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 275 3e-74
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 185 4e-47
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 141 8e-34
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 137 1e-32
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 134 9e-32
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 132 3e-31
03_01_0034 + 318432-318825,318902-319851 132 3e-31
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 131 6e-31
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 124 7e-29
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 118 8e-27
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 101 8e-22
06_03_0735 - 23987349-23989196 29 5.0
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 29 6.7
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 29 6.7
07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738 28 8.8
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 28 8.8
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 288 bits (707), Expect = 4e-78
Identities = 130/177 (73%), Positives = 146/177 (82%)
Frame = +3
Query: 123 MRECISVHVGQAGVXIGNACWELYCLEHGIQPDGXMPTDXTIGGGDDSFNTFFSXTGAGK 302
MRECIS+H+GQAG+ +GNACWELYCLEHGIQPDG MP D T+GGGDD+FNTFFS TGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 303 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVDLVLD 482
HVPRAVFVDLEPTV+DEVRTG YRQLFHP QLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 483 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLXMERLSX*LRQEV*XEFAIYPAPQV 653
RIRKLAD CTGLQGFL+F+ L +ERLS ++ F +YP+PQV
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV 177
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +2
Query: 611 RSLXGVRHLPRASGXTAVVXPYNSILTTHXXLXTLTVLSWXDNXXXYEIC 760
+S G P T+VV PYNS+L+TH L V DN Y+IC
Sbjct: 164 KSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 286 bits (701), Expect = 2e-77
Identities = 129/177 (72%), Positives = 145/177 (81%)
Frame = +3
Query: 123 MRECISVHVGQAGVXIGNACWELYCLEHGIQPDGXMPTDXTIGGGDDSFNTFFSXTGAGK 302
MRECIS+H+GQAG+ +GNACWELYCLEHGIQ DG MP+D T+GGGDD+FNTFFS TGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 303 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVDLVLD 482
HVPRAVFVDLEPTV+DEVRTG YRQLFHP QLI GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 483 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLXMERLSX*LRQEV*XEFAIYPAPQV 653
RIRKLAD CTGLQGFL+F+ L +ERLS ++ F +YP+PQV
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV 177
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +2
Query: 611 RSLXGVRHLPRASGXTAVVXPYNSILTTHXXLXTLTVLSWXDNXXXYEIC 760
+S G P T+VV PYNS+L+TH L V DN Y+IC
Sbjct: 164 KSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 275 bits (675), Expect = 3e-74
Identities = 123/177 (69%), Positives = 144/177 (81%)
Frame = +3
Query: 123 MRECISVHVGQAGVXIGNACWELYCLEHGIQPDGXMPTDXTIGGGDDSFNTFFSXTGAGK 302
MRE IS+H+GQAG+ +GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFS TGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 303 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVDLVLD 482
HVPRA+FVDLEPTV+DEVRTG+YRQLFHP QLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 483 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLXMERLSX*LRQEV*XEFAIYPAPQV 653
R+RKLAD CTGLQGFL+F+ L +ERLS ++ F IYP+PQV
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQV 177
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/50 (42%), Positives = 25/50 (50%)
Frame = +2
Query: 611 RSLXGVRHLPRASGXTAVVXPYNSILTTHXXLXTLTVLSWXDNXXXYEIC 760
+S G P TAVV PYNS+L+TH L V DN Y+IC
Sbjct: 164 KSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 185 bits (451), Expect = 4e-47
Identities = 87/139 (62%), Positives = 105/139 (75%)
Frame = +3
Query: 234 TDXTIGGGDDSFNTFFSXTGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKE 413
+D T G D+FNTFFS T +GKHVPRA+FVDLEPTV+DEV+TG YRQLFHP QLI+ KE
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKE 157
Query: 414 DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLXMERL 593
DAANN+ARGHYT+G+E+VDL LDR+RKLAD CTGLQGFL+F+ L +ERL
Sbjct: 158 DAANNFARGHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 217
Query: 594 SX*LRQEV*XEFAIYPAPQ 650
S ++ F IYP+PQ
Sbjct: 218 SVDYGRKSKLGFTIYPSPQ 236
Score = 79.4 bits (187), Expect = 4e-15
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = +3
Query: 123 MRECISVHVGQAGVXIGNACWELYCLEHGIQPDGXMPTD 239
MRE IS+H+GQAG+ +GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
Score = 39.1 bits (87), Expect = 0.005
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2
Query: 656 TAVVXPYNSILTTHXXLXTLTVLSWXDNXXXYEIC 760
TAVV PYNS+L+TH + V+ DN Y+IC
Sbjct: 260 TAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDIC 294
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 141 bits (341), Expect = 8e-34
Identities = 69/183 (37%), Positives = 101/183 (55%)
Frame = +3
Query: 105 KKTQIKMRECISVHVGQAGVXIGNACWELYCLEHGIQPDGXMPTDXTIGGGDDSFNTFFS 284
KK + KMRE + + GQ G IG+ WE+ C EHGI P G + + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL--ERVNVYYN 232
Query: 285 XTGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEI 464
G+ VPRAV +DLEP +D VRTG Y Q+F P + G+ A NN+A+GHYT G E+
Sbjct: 233 EASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 292
Query: 465 VDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLXMERLSX*LRQEV*XEFAIYPA 644
+D VLD +RK A+ C LQGF + H L + ++ + F+++P+
Sbjct: 293 IDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 352
Query: 645 PQV 653
P+V
Sbjct: 353 PKV 355
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 137 bits (331), Expect = 1e-32
Identities = 68/180 (37%), Positives = 99/180 (55%), Gaps = 3/180 (1%)
Frame = +3
Query: 123 MRECISVHVGQAGVXIGNACWELYCLEHGIQPDGXMPTDXTIGGGD---DSFNTFFSXTG 293
MRE + + GQ G IG+ WE+ C EHGI P G +G D + N +++
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGTSDLQLERVNVYYNEAS 55
Query: 294 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVDL 473
G+ VPRAV +DLEP +D VRTG Y Q+F P + G+ A NN+A+GHYT G E++D
Sbjct: 56 CGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDS 115
Query: 474 VLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLXMERLSX*LRQEV*XEFAIYPAPQV 653
VLD +RK A+ C LQGF + H L + ++ + F+++P+P+V
Sbjct: 116 VLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 175
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 134 bits (324), Expect = 9e-32
Identities = 65/177 (36%), Positives = 97/177 (54%)
Frame = +3
Query: 123 MRECISVHVGQAGVXIGNACWELYCLEHGIQPDGXMPTDXTIGGGDDSFNTFFSXTGAGK 302
MRE + + GQ G IG WE+ C EHGI G D + + N +++ G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 303 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVDLVLD 482
+VPRAV +DLEP +D VR+G Y Q+F P + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 483 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLXMERLSX*LRQEV*XEFAIYPAPQV 653
+RK A+ C LQGF + H L + ++ + F+++P+P+V
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 175
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 132 bits (320), Expect = 3e-31
Identities = 63/177 (35%), Positives = 97/177 (54%)
Frame = +3
Query: 123 MRECISVHVGQAGVXIGNACWELYCLEHGIQPDGXMPTDXTIGGGDDSFNTFFSXTGAGK 302
MRE + + GQ G IG WE+ C EHG+ G D + + N +++ G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQL--ERINVYYNEASGGR 58
Query: 303 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVDLVLD 482
+VPRAV +DLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 483 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLXMERLSX*LRQEV*XEFAIYPAPQV 653
+RK A+ C LQGF + H L + ++ + F+++P+P+V
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 175
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 132 bits (320), Expect = 3e-31
Identities = 64/177 (36%), Positives = 95/177 (53%)
Frame = +3
Query: 123 MRECISVHVGQAGVXIGNACWELYCLEHGIQPDGXMPTDXTIGGGDDSFNTFFSXTGAGK 302
MRE + + GQ G IG WE+ C EHGI G D + + N +++ G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQL--ERVNVYYNEASCGR 58
Query: 303 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVDLVLD 482
VPRAV +DLEP +D VR+G Y +F P + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 118
Query: 483 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLXMERLSX*LRQEV*XEFAIYPAPQV 653
+RK A+ C LQGF + H L + ++ + F+++P+P+V
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 175
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 131 bits (317), Expect = 6e-31
Identities = 64/177 (36%), Positives = 96/177 (54%)
Frame = +3
Query: 123 MRECISVHVGQAGVXIGNACWELYCLEHGIQPDGXMPTDXTIGGGDDSFNTFFSXTGAGK 302
MRE + + GQ G IG WE+ C EHGI G D + + N +++ G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 303 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVDLVLD 482
VPRAV +DLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 483 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLXMERLSX*LRQEV*XEFAIYPAPQV 653
+RK A+ C LQGF + H L + ++ + F+++P+P+V
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 175
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 124 bits (300), Expect = 7e-29
Identities = 59/134 (44%), Positives = 80/134 (59%)
Frame = +3
Query: 123 MRECISVHVGQAGVXIGNACWELYCLEHGIQPDGXMPTDXTIGGGDDSFNTFFSXTGAGK 302
MRE + + GQ G IG WE+ C EHGI P G + + + N +++ G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQL--ERVNVYYNEASCGR 58
Query: 303 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVDLVLD 482
VPRAV +DLEP +D VRTG Y Q+F P + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 483 RIRKLADQCTGLQG 524
+RK A+ C LQG
Sbjct: 119 VVRKEAENCDCLQG 132
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 118 bits (283), Expect = 8e-27
Identities = 56/133 (42%), Positives = 77/133 (57%)
Frame = +3
Query: 123 MRECISVHVGQAGVXIGNACWELYCLEHGIQPDGXMPTDXTIGGGDDSFNTFFSXTGAGK 302
MRE + + GQ G IG WE+ C EHG+ P G T + N +F+ G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYT--GTSPQQLERINVYFNEASGGR 58
Query: 303 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVDLVLD 482
HVPRAV +DLEP +D +R+G +F P + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 HVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 483 RIRKLADQCTGLQ 521
+RK A+ C LQ
Sbjct: 119 VVRKEAENCDCLQ 131
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 101 bits (242), Expect = 8e-22
Identities = 55/174 (31%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Frame = +3
Query: 126 RECISVHVGQAGVXIGNACWELYCLEHGIQPDGXMPTDXTIGGGDDSFNTFFSXTGAGKH 305
RE I++ VGQ G IG W+ CLEHGI DG + T GG D + FF +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 306 VPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKE--DAANNYARGHYTIGKEIVDLVL 479
+PRA+ VDLEP V++ ++ YR L++ + + A NN+A G++ G+++VD ++
Sbjct: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIM 119
Query: 480 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLXMERLSX*LRQEV*XEFAIYP 641
D I + AD L+GF++ H +E L+ +++ ++++P
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFP 173
>06_03_0735 - 23987349-23989196
Length = 615
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 627 TPXRLLAVVXRRDAPSIRK*TQSRYLHRRSGRSGILADRYTGQRACGF 484
+P L AV+ R P + LH R+ R+G+LADRY F
Sbjct: 40 SPVSLAAVLLRHPPPRL-----GCCLHGRAARAGLLADRYLANALLAF 82
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 262 SSPPPMVLSVGXWPSGWMPCSR 197
S P P+ LS SGW+PCSR
Sbjct: 147 SMPYPITLSAVISLSGWLPCSR 168
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 259 SPPPMVLSVGXWPSGWMPCSR 197
+P P+ LSV SGW+PC+R
Sbjct: 149 NPYPVNLSVSVGLSGWLPCAR 169
>07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738
Length = 400
Score = 28.3 bits (60), Expect = 8.8
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 453 QWCSDHGHSCWPHLP 409
++ S+HGHSCW +P
Sbjct: 26 RYISEHGHSCWSSVP 40
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 169 SVMPAGSFTAWSTASSLMAXCPQTXPSGVETILSTLSSAXPE 294
+ M A T+ S +S P + PSGV L + SSA PE
Sbjct: 691 TAMAASQATSISRGASQPLAVPNSMPSGVNFPLQSSSSAPPE 732
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,578,559
Number of Sequences: 37544
Number of extensions: 383249
Number of successful extensions: 1039
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -