Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_L20
         (860 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    26   0.51 
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    23   2.7  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   3.6  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           22   8.4  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           22   8.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   8.4  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 25.8 bits (54), Expect = 0.51
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = -1

Query: 389 INMPFITSKFSV*RFPNTP-GTDVNILIPA--SLMFGSCALAQVNMNCRNSGHWLLPS 225
           I+ P I+  F+   FP TP G +V ++     + +  +  + Q    C+  G W LPS
Sbjct: 189 ISCPEISVNFA--HFPATPTGREVALIEQTIGTCVANAVVIEQPTFLCKGDGKWYLPS 244


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -2

Query: 766 HGIGHLFTHPWLVLSHIMLPSLQVPVGASY 677
           H  G  F+ PWL+  HI   + + P    +
Sbjct: 46  HLCGKAFSRPWLLQGHIRTHTGEKPFSCQH 75


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 754 HLFTHPWLVLSHIMLPSLQVPV 689
           H + HPWL L    L +L  P+
Sbjct: 540 HTWIHPWLPLLRNRLDTLIYPI 561


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
 Frame = -2

Query: 694 PVGASYLQHLCPQPPLC----KLGIWSPAG 617
           P G   L +L P PP C    KLGI    G
Sbjct: 71  PPGPKDLVYLEPSPPFCEKNPKLGILGTHG 100


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
 Frame = -2

Query: 694 PVGASYLQHLCPQPPLC----KLGIWSPAG 617
           P G   L +L P PP C    KLGI    G
Sbjct: 72  PPGPKDLVYLEPSPPFCEKNPKLGILGTHG 101


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 571 SMQSHHQLLQ*TELLPASKVEEHH 500
           ++Q HH L      L ++ V++HH
Sbjct: 137 TLQRHHHLQNHHHHLQSTAVQDHH 160


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,504
Number of Sequences: 438
Number of extensions: 5436
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)