Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_L19
         (828 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0096 + 12328116-12329561,12329810-12329852,12332119-123322...    29   6.0  
01_06_0660 + 30969879-30970218,30970346-30970514,30971373-309716...    28   7.9  

>09_03_0096 +
           12328116-12329561,12329810-12329852,12332119-12332237,
           12333326-12333853
          Length = 711

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
 Frame = +3

Query: 426 VGSGLALLLALMK-FMGDSNHSPLGGPYARLPTRAIKNSYSLARLSCVLSASFLTFSTA- 599
           +G  +A ++A  + F+ D +H+   G +A L  R ++  YSLA L C+L +S  T S A 
Sbjct: 106 LGEPVANIVANARVFLSDPDHAGGAGGFADL--RRLEE-YSLAGLVCLLQSSRPTLSRAE 162

Query: 600 --WKLIQICMQSEQ 635
             W L+   ++ +Q
Sbjct: 163 AMWCLLSCDLRLDQ 176


>01_06_0660 +
           30969879-30970218,30970346-30970514,30971373-30971635,
           30971717-30971864,30972019-30972082,30972225-30972248
          Length = 335

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -1

Query: 444 EPSRCLPLKFXR-GVVKASMQPTLSNYRLIKKNPSVSIPFFSTYQPLEAITAS 289
           E  + L LK    G ++     TL +YRL +++PS+S+ FF  +    + T +
Sbjct: 44  EEDKKLDLKLGLPGFIEDDEAETLRDYRLQQESPSLSLSFFPKHSKTTSSTTT 96


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,398,290
Number of Sequences: 37544
Number of extensions: 434059
Number of successful extensions: 817
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)