Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_L19
         (828 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100669-2|AAK39264.1|  546|Caenorhabditis elegans Hypothetical ...    29   4.1  
AF039050-5|AAC47938.1|  499|Caenorhabditis elegans Cytochrome p4...    29   5.4  
AL132902-14|CAE18021.2|  758|Caenorhabditis elegans Hypothetical...    28   9.4  

>AF100669-2|AAK39264.1|  546|Caenorhabditis elegans Hypothetical
           protein R11E3.2 protein.
          Length = 546

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/60 (25%), Positives = 30/60 (50%)
 Frame = +3

Query: 402 PLPXRTLTVGSGLALLLALMKFMGDSNHSPLGGPYARLPTRAIKNSYSLARLSCVLSASF 581
           P+   +L  G   +  +A+++ +GD N         R+PT  +   + +  + C+LS+SF
Sbjct: 277 PIIDISLLCGFIASSFVAMIESIGDYNLCAKLSKQGRIPTSNLNRGFIVEGIGCMLSSSF 336


>AF039050-5|AAC47938.1|  499|Caenorhabditis elegans Cytochrome p450
           family protein 34A8 protein.
          Length = 499

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +2

Query: 545 ACPSVLCA*CEFFNVLDRVEVNSNLYAVGTTPLVTNTIQYVPTAR 679
           ACP    A  E F +   + ++ +L  VGT P +  T  + P  R
Sbjct: 442 ACPGESLARAELFLITGNMILDYDLEPVGTLPKIETTTPFAPMKR 486


>AL132902-14|CAE18021.2|  758|Caenorhabditis elegans Hypothetical
           protein Y71A12B.15 protein.
          Length = 758

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -2

Query: 122 FCETLPEYSFINVSSKHIRSL 60
           FC++ P   F++VSS ++RSL
Sbjct: 182 FCKSFPNIRFLDVSSTNVRSL 202


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,181,192
Number of Sequences: 27780
Number of extensions: 364869
Number of successful extensions: 819
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)