Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_L18
         (899 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0896 - 12233706-12233801,12234005-12234181,12234741-122348...    32   0.71 
11_06_0423 + 23349588-23350084,23350133-23350346                       30   2.9  
06_03_0697 - 23621808-23622127,23622194-23622932,23623298-236233...    29   3.8  
05_06_0099 + 25572530-25573603,25574178-25574633,25575165-25575449     29   5.0  
07_03_1107 - 24024387-24024497,24025799-24026410                       28   8.8  
02_05_0965 + 33136373-33136512,33136595-33136688,33136845-331368...    28   8.8  

>03_02_0896 -
           12233706-12233801,12234005-12234181,12234741-12234854,
           12234928-12235006,12235372-12235533,12235957-12236079,
           12236139-12236218
          Length = 276

 Score = 31.9 bits (69), Expect = 0.71
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +2

Query: 611 NAKLQQHMPGFLDDSIYSGTLNXFSGCTSSAEACIKQAPGADI 739
           N K+ Q +PG     +Y G+L+   GCT   E   K + G DI
Sbjct: 74  NEKMAQSVPGI---KVYGGSLDNVKGCTDQVENGTKLSLGKDI 113


>11_06_0423 + 23349588-23350084,23350133-23350346
          Length = 236

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = +2

Query: 338 EKTNQQFTITELEDPNASTDSQKPECKPTKTRVRGGKACAGQTIFEEQFDSLDENVWQI 514
           E    Q  IT  E+  A  DS +P C    ++     + AG++  E   D LDE +  I
Sbjct: 11  ESQFNQCAITAEEEAAALPDSTEPPCTNVASQDEESGSAAGESESESDSDDLDEVIADI 69


>06_03_0697 -
           23621808-23622127,23622194-23622932,23623298-23623327,
           23624183-23624200,23625176-23625268,23625665-23626123
          Length = 552

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +2

Query: 125 EYPXQDVPKMTLFAFQGNLNHKLDSTSVGTLSAEVLDPVN 244
           +YP  D      +++   L H +D    G+L +E L P N
Sbjct: 349 QYPNYDFNNNNAWSYHDPLGHPIDQVDFGSLRSEYLSPNN 388


>05_06_0099 + 25572530-25573603,25574178-25574633,25575165-25575449
          Length = 604

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/65 (26%), Positives = 29/65 (44%)
 Frame = -1

Query: 200 CYPVYGSSCLGTRTVSFWGHLEXDIRSPFGRKACIFTSGI*AYDIFINKIRHNTRPHIAA 21
           C  VY +S         W   E   R P+GRK  +++ G+  +++F   I +     + A
Sbjct: 444 CEEVYCNSLEDDPGTYRWMAPEMYKRKPYGRKVDVYSFGLVLWELFSGSIPYEEMTPLQA 503

Query: 20  AIFVL 6
           A  V+
Sbjct: 504 AFAVV 508


>07_03_1107 - 24024387-24024497,24025799-24026410
          Length = 240

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = -3

Query: 519 CSICQTFSSRES---NCSSNIVCPAHALPPRTL 430
           C IC  FSSR +   +CS ++   +H L  RTL
Sbjct: 206 CPICDVFSSRCAAYLDCSCSVTALSHRLKTRTL 238


>02_05_0965 +
           33136373-33136512,33136595-33136688,33136845-33136889,
           33137007-33137174,33137247-33137331,33137531-33137637,
           33137918-33137998,33138232-33138284,33138361-33138460,
           33138911-33139054,33139268-33139364,33139528-33139611,
           33139904-33140123,33140204-33140297,33140406-33140975,
           33141348-33141449,33141564-33141656,33141834-33141836
          Length = 759

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = +1

Query: 640 LSGRLYIFWHT*XVQWVYF--VSRSMHQTGS 726
           +SGR+   WH   V WV+F  +S+S+ Q  S
Sbjct: 649 VSGRILRAWHQGGVNWVHFPDISKSLAQADS 679


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,136,700
Number of Sequences: 37544
Number of extensions: 447474
Number of successful extensions: 1223
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)