Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_L17
(886 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated... 84 7e-16
AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated ... 84 7e-16
AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor transc... 84 7e-16
U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c pr... 39 0.028
U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein. 39 0.028
BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor, argini... 39 0.028
BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor, argini... 39 0.028
AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor, argini... 39 0.028
AL136097-15|CAI16208.1| 227|Homo sapiens nucleolar protein 8 pr... 38 0.037
AL136097-14|CAI16209.1| 205|Homo sapiens nucleolar protein 8 pr... 38 0.037
AL136097-13|CAC12712.1| 427|Homo sapiens nucleolar protein 8 pr... 38 0.037
AK001049-1|BAA91479.1| 427|Homo sapiens protein ( Homo sapiens ... 38 0.037
AB109030-1|BAC99315.1| 1167|Homo sapiens Nop132 protein. 38 0.037
AB105104-1|BAD12268.1| 1167|Homo sapiens nucleolar protein 8 pro... 38 0.037
BC139836-1|AAI39837.1| 563|Homo sapiens RBM15B protein protein. 34 0.60
Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein. 34 0.79
U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55... 34 0.79
U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein. 34 0.79
L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA, com... 34 0.79
L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein. 34 0.79
L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein. 34 0.79
CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein. 34 0.79
BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein pr... 34 0.79
BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif prote... 34 0.79
BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein. 34 0.79
BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containi... 34 0.79
BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containi... 34 0.79
BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containi... 34 0.79
BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein. 34 0.79
BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein. 34 0.79
BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containi... 34 0.79
AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif prote... 34 0.79
AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif prote... 34 0.79
M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternati... 33 1.0
M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternati... 33 1.0
M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein. 33 1.0
BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein. 33 1.0
BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor, argini... 33 1.0
BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2 (Dros... 33 1.0
AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens ... 33 1.0
AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor, argini... 33 1.0
AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein. 33 1.0
D38491-1|BAA07503.1| 227|Homo sapiens KIAA0117 protein. 33 1.4
BC029451-1|AAH29451.1| 425|Homo sapiens RNA binding motif prote... 33 1.4
AL732292-2|CAI21936.1| 430|Homo sapiens RNA binding motif prote... 33 1.4
AL133418-3|CAI22960.1| 430|Homo sapiens RNA binding motif prote... 33 1.4
AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein. 33 1.4
AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein. 33 1.4
AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein. 33 1.4
AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein. 33 1.4
AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein. 33 1.4
AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein. 33 1.4
X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF prot... 33 1.8
BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA au... 33 1.8
BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein ... 33 1.8
BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA au... 33 1.8
AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion pro... 33 1.8
AL732292-3|CAM28277.1| 408|Homo sapiens novel protein protein. 33 1.8
AL133418-4|CAM28326.1| 408|Homo sapiens novel protein protein. 33 1.8
AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens ... 33 1.8
AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein ... 33 1.8
U39402-1|AAC99998.1| 367|Homo sapiens 199G4 protein. 32 2.4
BC003402-1|AAH03402.1| 420|Homo sapiens RNA binding motif prote... 32 2.4
AK001152-1|BAA91521.1| 420|Homo sapiens protein ( Homo sapiens ... 32 2.4
U32519-1|AAB07787.1| 466|Homo sapiens GAP SH3 binding protein p... 32 3.2
CR536535-1|CAG38772.1| 466|Homo sapiens G3BP protein. 32 3.2
BT019384-1|AAV38191.1| 466|Homo sapiens Ras-GTPase-activating p... 32 3.2
BC108278-1|AAI08279.1| 466|Homo sapiens GTPase activating prote... 32 3.2
BC071558-1|AAH71558.1| 436|Homo sapiens potassium voltage-gated... 32 3.2
BC006997-1|AAH06997.1| 466|Homo sapiens GTPase activating prote... 32 3.2
AK222606-1|BAD96326.1| 466|Homo sapiens Ras-GTPase-activating p... 32 3.2
AK130003-1|BAC85272.1| 307|Homo sapiens protein ( Homo sapiens ... 32 3.2
AF454548-1|AAM93549.1| 436|Homo sapiens voltage-gated potassium... 32 3.2
AF454547-1|AAM93548.1| 425|Homo sapiens voltage-gated potassium... 32 3.2
AF450110-1|AAP46291.1| 433|Homo sapiens voltage-gated potassium... 32 3.2
AF348982-1|AAL83909.1| 436|Homo sapiens voltage-gated potassium... 32 3.2
AC025750-1|AAY24039.1| 436|Homo sapiens unknown protein. 32 3.2
AB070604-1|BAB85520.1| 436|Homo sapiens voltage-gated K+ channe... 32 3.2
U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-4... 31 5.6
EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1 ... 31 5.6
EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein. 31 5.6
CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein. 31 5.6
BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein... 31 5.6
BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein. 31 5.6
BC006474-1|AAH06474.1| 1027|Homo sapiens Unknown (protein for IM... 31 5.6
AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein... 31 5.6
AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein... 31 5.6
AB002330-1|BAA20790.1| 1028|Homo sapiens KIAA0332 protein. 31 5.6
CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein. 31 7.3
BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein. 31 7.3
AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1... 31 7.3
AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1... 31 7.3
AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens ... 31 7.3
AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 b... 31 7.3
AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1 a... 31 7.3
U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein. 30 9.7
BC064960-1|AAH64960.1| 143|Homo sapiens RBM4 protein protein. 30 9.7
BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif prote... 30 9.7
BC021120-1|AAH21120.1| 177|Homo sapiens RBM4 protein protein. 30 9.7
BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif prote... 30 9.7
BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif prote... 30 9.7
BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif prote... 30 9.7
>AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 83.8 bits (198), Expect = 7e-16
Identities = 42/71 (59%), Positives = 52/71 (73%)
Frame = +3
Query: 141 MVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTESVPTGASVSGNSGVCATV 320
MVRETRHLWVGNLP+N+RE++I EHFKRYGRV++VK+L + S GV A V
Sbjct: 1 MVRETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGS---------EGGVAAFV 51
Query: 321 AFMDIKSASKS 353
F+DIKSA K+
Sbjct: 52 DFVDIKSAQKA 62
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 346 QKAHNIEHVLDERTLTTEYYEPAAIP 423
QKAHN + + +R L T+Y EP IP
Sbjct: 60 QKAHNSVNKMGDRDLRTDYNEPGTIP 85
>AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 83.8 bits (198), Expect = 7e-16
Identities = 42/71 (59%), Positives = 52/71 (73%)
Frame = +3
Query: 141 MVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTESVPTGASVSGNSGVCATV 320
MVRETRHLWVGNLP+N+RE++I EHFKRYGRV++VK+L + S GV A V
Sbjct: 1 MVRETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGS---------EGGVAAFV 51
Query: 321 AFMDIKSASKS 353
F+DIKSA K+
Sbjct: 52 DFVDIKSAQKA 62
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 346 QKAHNIEHVLDERTLTTEYYEPAAIP 423
QKAHN + + +R L T+Y EP IP
Sbjct: 60 QKAHNSVNKMGDRDLRTDYNEPGTIP 85
>AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor
transcription cofactor protein.
Length = 3664
Score = 83.8 bits (198), Expect = 7e-16
Identities = 42/71 (59%), Positives = 52/71 (73%)
Frame = +3
Query: 141 MVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTESVPTGASVSGNSGVCATV 320
MVRETRHLWVGNLP+N+RE++I EHFKRYGRV++VK+L + S GV A V
Sbjct: 1 MVRETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGS---------EGGVAAFV 51
Query: 321 AFMDIKSASKS 353
F+DIKSA K+
Sbjct: 52 DFVDIKSAQKA 62
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 346 QKAHNIEHVLDERTLTTEYYEPAAIP 423
QKAHN + + +R L T+Y EP IP
Sbjct: 60 QKAHNSVNKMGDRDLRTDYNEPGTIP 85
>U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c
protein.
Length = 221
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTESVP 275
++VGNLP ++RE + + F +YGR++ ++L R VP
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP 53
>U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein.
Length = 221
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTESVP 275
++VGNLP ++RE + + F +YGR++ ++L R VP
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP 53
>BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTESVP 275
++VGNLP ++RE + + F +YGR++ ++L R VP
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP 53
>BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTESVP 275
++VGNLP ++RE + + F +YGR++ ++L R VP
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP 53
>AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTESVP 275
++VGNLP ++RE + + F +YGR++ ++L R VP
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP 53
>AL136097-15|CAI16208.1| 227|Homo sapiens nucleolar protein 8
protein.
Length = 227
Score = 38.3 bits (85), Expect = 0.037
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTE 266
K+ RET+ L+VG L +I E ++ F R+G V +V+++ R +
Sbjct: 2 KVNRETKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKD 44
>AL136097-14|CAI16209.1| 205|Homo sapiens nucleolar protein 8
protein.
Length = 205
Score = 38.3 bits (85), Expect = 0.037
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTE 266
K+ RET+ L+VG L +I E ++ F R+G V +V+++ R +
Sbjct: 2 KVNRETKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKD 44
>AL136097-13|CAC12712.1| 427|Homo sapiens nucleolar protein 8
protein.
Length = 427
Score = 38.3 bits (85), Expect = 0.037
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTE 266
K+ RET+ L+VG L +I E ++ F R+G V +V+++ R +
Sbjct: 2 KVNRETKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKD 44
>AK001049-1|BAA91479.1| 427|Homo sapiens protein ( Homo sapiens
cDNA FLJ10187 fis, clone HEMBA1004596. ).
Length = 427
Score = 38.3 bits (85), Expect = 0.037
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTE 266
K+ RET+ L+VG L +I E ++ F R+G V +V+++ R +
Sbjct: 2 KVNRETKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKD 44
>AB109030-1|BAC99315.1| 1167|Homo sapiens Nop132 protein.
Length = 1167
Score = 38.3 bits (85), Expect = 0.037
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTE 266
K+ RET+ L+VG L +I E ++ F R+G V +V+++ R +
Sbjct: 2 KVNRETKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKD 44
>AB105104-1|BAD12268.1| 1167|Homo sapiens nucleolar protein 8
protein.
Length = 1167
Score = 38.3 bits (85), Expect = 0.037
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTE 266
K+ RET+ L+VG L +I E ++ F R+G V +V+++ R +
Sbjct: 2 KVNRETKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKD 44
>BC139836-1|AAI39837.1| 563|Homo sapiens RBM15B protein protein.
Length = 563
Score = 34.3 bits (75), Expect = 0.60
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +3
Query: 147 RETRHLWVGNLPDNIREDRIREHFKRYGRVQNV 245
R TR+L++GNL ++ E +R F++YG ++ V
Sbjct: 7 RATRNLFIGNLDHSVSEVELRRAFEKYGIIEEV 39
>Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.79
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNV 245
K + L+VGNLP +I E+ +R+ F++YG+ V
Sbjct: 68 KTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV 103
>U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55
protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.79
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNV 245
K + L+VGNLP +I E+ +R+ F++YG+ V
Sbjct: 68 KTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV 103
>U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.79
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNV 245
K + L+VGNLP +I E+ +R+ F++YG+ V
Sbjct: 68 KTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV 103
>L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA,
complete cds. ).
Length = 471
Score = 33.9 bits (74), Expect = 0.79
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNV 245
K + L+VGNLP +I E+ +R+ F++YG+ V
Sbjct: 68 KTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV 103
>L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein.
Length = 530
Score = 33.9 bits (74), Expect = 0.79
Identities = 14/36 (38%), Positives = 27/36 (75%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTES 269
L+VG+L NI ED +R F+ +GR+++++L+ +E+
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSET 287
>L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.79
Identities = 14/36 (38%), Positives = 27/36 (75%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTES 269
L+VG+L NI ED +R F+ +GR+++++L+ +E+
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSET 287
>CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.79
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNV 245
K + L+VGNLP +I E+ +R+ F++YG+ V
Sbjct: 68 KTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV 103
>BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 33.9 bits (74), Expect = 0.79
Identities = 14/36 (38%), Positives = 27/36 (75%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTES 269
L+VG+L NI ED +R F+ +GR+++++L+ +E+
Sbjct: 95 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSET 130
>BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 33.9 bits (74), Expect = 0.79
Identities = 14/36 (38%), Positives = 27/36 (75%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTES 269
L+VG+L NI ED +R F+ +GR+++++L+ +E+
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSET 287
>BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein.
Length = 508
Score = 33.9 bits (74), Expect = 0.79
Identities = 14/36 (38%), Positives = 27/36 (75%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTES 269
L+VG+L NI ED +R F+ +GR+++++L+ +E+
Sbjct: 230 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSET 265
>BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.79
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNV 245
K + L+VGNLP +I E+ +R+ F++YG+ V
Sbjct: 68 KTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV 103
>BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.79
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNV 245
K + L+VGNLP +I E+ +R+ F++YG+ V
Sbjct: 68 KTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV 103
>BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.79
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNV 245
K + L+VGNLP +I E+ +R+ F++YG+ V
Sbjct: 68 KTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV 103
>BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.79
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNV 245
K + L+VGNLP +I E+ +R+ F++YG+ V
Sbjct: 68 KTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV 103
>BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.79
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNV 245
K + L+VGNLP +I E+ +R+ F++YG+ V
Sbjct: 68 KTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV 103
>BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.79
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNV 245
K + L+VGNLP +I E+ +R+ F++YG+ V
Sbjct: 68 KTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV 103
>AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif protein
39 protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.79
Identities = 14/36 (38%), Positives = 27/36 (75%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTES 269
L+VG+L NI ED +R F+ +GR+++++L+ +E+
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSET 287
>AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 33.9 bits (74), Expect = 0.79
Identities = 14/36 (38%), Positives = 27/36 (75%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTES 269
L+VG+L NI ED +R F+ +GR+++++L+ +E+
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSET 287
>M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 248
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTESVP 275
++VGNLP +IR I + F +YG ++++ L R P
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPP 55
>M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 292
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTESVP 275
++VGNLP +IR I + F +YG ++++ L R P
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPP 55
>M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein.
Length = 248
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTESVP 275
++VGNLP +IR I + F +YG ++++ L R P
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPP 55
>BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein.
Length = 201
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTESVP 275
++VGNLP +IR I + F +YG ++++ L R P
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPP 55
>BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 248
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTESVP 275
++VGNLP +IR I + F +YG ++++ L R P
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPP 55
>BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2
(Drosophila) protein.
Length = 328
Score = 33.5 bits (73), Expect = 1.0
Identities = 12/39 (30%), Positives = 27/39 (69%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLL 254
KMV T+ ++VG L N + ++++F+++G+V++ L+
Sbjct: 104 KMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLM 142
>AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ36569 fis, clone TRACH2010824, highly similar to
Ribonucleoprotein. ).
Length = 251
Score = 33.5 bits (73), Expect = 1.0
Identities = 12/39 (30%), Positives = 27/39 (69%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLL 254
KMV T+ ++VG L N + ++++F+++G+V++ L+
Sbjct: 100 KMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLM 138
>AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 233
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTESVP 275
++VGNLP +IR I + F +YG ++++ L R P
Sbjct: 50 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPP 87
>AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein.
Length = 248
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTESVP 275
++VGNLP +IR I + F +YG ++++ L R P
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPP 55
>D38491-1|BAA07503.1| 227|Homo sapiens KIAA0117 protein.
Length = 227
Score = 33.1 bits (72), Expect = 1.4
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 144 VRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVK 248
++ R ++VGNLP + +++ FK YG++++V+
Sbjct: 183 LKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVR 217
>BC029451-1|AAH29451.1| 425|Homo sapiens RNA binding motif protein
34 protein.
Length = 425
Score = 33.1 bits (72), Expect = 1.4
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 144 VRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVK 248
++ R ++VGNLP + +++ FK YG++++V+
Sbjct: 176 LKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVR 210
Score = 32.7 bits (71), Expect = 1.8
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 147 RETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLL 254
R+ R ++VGNLP + E I +HF G + V+++
Sbjct: 279 RDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIV 314
>AL732292-2|CAI21936.1| 430|Homo sapiens RNA binding motif protein
34 protein.
Length = 430
Score = 33.1 bits (72), Expect = 1.4
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 144 VRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVK 248
++ R ++VGNLP + +++ FK YG++++V+
Sbjct: 181 LKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVR 215
Score = 32.7 bits (71), Expect = 1.8
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 147 RETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLL 254
R+ R ++VGNLP + E I +HF G + V+++
Sbjct: 284 RDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIV 319
>AL133418-3|CAI22960.1| 430|Homo sapiens RNA binding motif protein
34 protein.
Length = 430
Score = 33.1 bits (72), Expect = 1.4
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 144 VRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVK 248
++ R ++VGNLP + +++ FK YG++++V+
Sbjct: 181 LKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVR 215
Score = 32.7 bits (71), Expect = 1.8
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 147 RETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLL 254
R+ R ++VGNLP + E I +HF G + V+++
Sbjct: 284 RDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIV 319
>AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein.
Length = 362
Score = 33.1 bits (72), Expect = 1.4
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLL 254
KMV T+ ++VG L N + ++++F+++G+V + L+
Sbjct: 103 KMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLM 141
>AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein.
Length = 179
Score = 33.1 bits (72), Expect = 1.4
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLL 254
KMV T+ ++VG L N + ++++F+++G+V + L+
Sbjct: 37 KMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLM 75
>AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein.
Length = 181
Score = 33.1 bits (72), Expect = 1.4
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLL 254
KMV T+ ++VG L N + ++++F+++G+V + L+
Sbjct: 40 KMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLM 78
>AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein.
Length = 181
Score = 33.1 bits (72), Expect = 1.4
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLL 254
KMV T+ ++VG L N + ++++F+++G+V + L+
Sbjct: 40 KMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLM 78
>AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein.
Length = 180
Score = 33.1 bits (72), Expect = 1.4
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLL 254
KMV T+ ++VG L N + ++++F+++G+V + L+
Sbjct: 40 KMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLM 78
>AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein.
Length = 362
Score = 33.1 bits (72), Expect = 1.4
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +3
Query: 138 KMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLL 254
KMV T+ ++VG L N + ++++F+++G+V + L+
Sbjct: 103 KMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLM 141
>X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF
protein.
Length = 475
Score = 32.7 bits (71), Expect = 1.8
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +3
Query: 135 SKMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTESVPTGASVSGNSGVCA 314
S+M R+ R L+VGN+P I E+ + + F R LG P ++
Sbjct: 142 SQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR------LGGLTQAPGNPVLAVQINQDK 195
Query: 315 TVAFMDIKSASKSSQ 359
AF++ +S +++Q
Sbjct: 196 NFAFLEFRSVDETTQ 210
>BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 32.7 bits (71), Expect = 1.8
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +3
Query: 135 SKMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTESVPTGASVSGNSGVCA 314
S+M R+ R L+VGN+P I E+ + + F R LG P ++
Sbjct: 142 SQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR------LGGLTQAPGNPVLAVQINQDK 195
Query: 315 TVAFMDIKSASKSSQ 359
AF++ +S +++Q
Sbjct: 196 NFAFLEFRSVDETTQ 210
>BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 150 ETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLL 254
++ ++VG +P N E +RE+FK++G V V ++
Sbjct: 111 KSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 145
>BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 32.7 bits (71), Expect = 1.8
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +3
Query: 135 SKMVRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTESVPTGASVSGNSGVCA 314
S+M R+ R L+VGN+P I E+ + + F R LG P ++
Sbjct: 142 SQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR------LGGLTQAPGNPVLAVQINQDK 195
Query: 315 TVAFMDIKSASKSSQ 359
AF++ +S +++Q
Sbjct: 196 NFAFLEFRSVDETTQ 210
>AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion
protein protein.
Length = 454
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 150 ETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLL 254
++ ++VG +P N E +RE+FK++G V V ++
Sbjct: 111 KSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 145
>AL732292-3|CAM28277.1| 408|Homo sapiens novel protein protein.
Length = 408
Score = 32.7 bits (71), Expect = 1.8
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 147 RETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLL 254
R+ R ++VGNLP + E I +HF G + V+++
Sbjct: 262 RDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIV 297
>AL133418-4|CAM28326.1| 408|Homo sapiens novel protein protein.
Length = 408
Score = 32.7 bits (71), Expect = 1.8
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 147 RETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLL 254
R+ R ++VGNLP + E I +HF G + V+++
Sbjct: 262 RDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIV 297
>AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ32288 fis, clone PROST2000325, highly similar to
Homo sapiens DAZ associated protein 1 (DAZAP1) mRNA. ).
Length = 289
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 150 ETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLL 254
++ ++VG +P N E +RE+FK++G V V ++
Sbjct: 22 KSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 56
>AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 150 ETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLL 254
++ ++VG +P N E +RE+FK++G V V ++
Sbjct: 111 KSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 145
>U39402-1|AAC99998.1| 367|Homo sapiens 199G4 protein.
Length = 367
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTE 266
L+VG L D I E +R HF ++G ++ + ++ R +
Sbjct: 181 LYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQ 215
>BC003402-1|AAH03402.1| 420|Homo sapiens RNA binding motif protein
22 protein.
Length = 420
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTE 266
L+VG L D I E +R HF ++G ++ + ++ R +
Sbjct: 234 LYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQ 268
>AK001152-1|BAA91521.1| 420|Homo sapiens protein ( Homo sapiens
cDNA FLJ10290 fis, clone MAMMA1002385, weakly similar to
RIBONUCLEOPROTEIN RB97D. ).
Length = 420
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTE 266
L+VG L D I E +R HF ++G ++ + ++ R +
Sbjct: 234 LYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQ 268
>U32519-1|AAB07787.1| 466|Homo sapiens GAP SH3 binding protein
protein.
Length = 466
Score = 31.9 bits (69), Expect = 3.2
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +3
Query: 138 KMVR--ETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKL 251
+MVR ++ L++GNLP + + +++ F+ YG V +++
Sbjct: 332 RMVRHPDSHQLFIGNLPHEVDKSELKDFFQSYGNVVELRI 371
>CR536535-1|CAG38772.1| 466|Homo sapiens G3BP protein.
Length = 466
Score = 31.9 bits (69), Expect = 3.2
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +3
Query: 138 KMVR--ETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKL 251
+MVR ++ L++GNLP + + +++ F+ YG V +++
Sbjct: 332 RMVRHPDSHQLFIGNLPHEVDKSELKDFFQSYGNVVELRI 371
>BT019384-1|AAV38191.1| 466|Homo sapiens Ras-GTPase-activating
protein SH3-domain-binding protein protein.
Length = 466
Score = 31.9 bits (69), Expect = 3.2
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +3
Query: 138 KMVR--ETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKL 251
+MVR ++ L++GNLP + + +++ F+ YG V +++
Sbjct: 332 RMVRHPDSHQLFIGNLPHEVDKSELKDFFQSYGNVVELRI 371
>BC108278-1|AAI08279.1| 466|Homo sapiens GTPase activating protein
(SH3 domain) binding protein 1 protein.
Length = 466
Score = 31.9 bits (69), Expect = 3.2
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +3
Query: 138 KMVR--ETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKL 251
+MVR ++ L++GNLP + + +++ F+ YG V +++
Sbjct: 332 RMVRHPDSHQLFIGNLPHEVDKSELKDFFQSYGNVVELRI 371
>BC071558-1|AAH71558.1| 436|Homo sapiens potassium voltage-gated
channel, subfamily G, member 3 protein.
Length = 436
Score = 31.9 bits (69), Expect = 3.2
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 411 RFVVLRGKCAFVKHMLNIVSFLMQT*Y 331
RF+V + KC FVK LNI+ L T Y
Sbjct: 239 RFIVSKNKCEFVKRPLNIIDLLAITPY 265
>BC006997-1|AAH06997.1| 466|Homo sapiens GTPase activating protein
(SH3 domain) binding protein 1 protein.
Length = 466
Score = 31.9 bits (69), Expect = 3.2
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +3
Query: 138 KMVR--ETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKL 251
+MVR ++ L++GNLP + + +++ F+ YG V +++
Sbjct: 332 RMVRHPDSHQLFIGNLPHEVDKSELKDFFQSYGNVVELRI 371
>AK222606-1|BAD96326.1| 466|Homo sapiens Ras-GTPase-activating
protein SH3-domain-binding protein variant protein.
Length = 466
Score = 31.9 bits (69), Expect = 3.2
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +3
Query: 138 KMVR--ETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKL 251
+MVR ++ L++GNLP + + +++ F+ YG V +++
Sbjct: 332 RMVRHPDSHQLFIGNLPHEVDKSELKDFFQSYGNVVELRI 371
>AK130003-1|BAC85272.1| 307|Homo sapiens protein ( Homo sapiens
cDNA FLJ26493 fis, clone KDN06317, highly similar to
Ras-GTPase-activating protein binding protein 1. ).
Length = 307
Score = 31.9 bits (69), Expect = 3.2
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +3
Query: 138 KMVR--ETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKL 251
+MVR ++ L++GNLP + + +++ F+ YG V +++
Sbjct: 173 RMVRHPDSHQLFIGNLPHEVDKSELKDFFQSYGNVVELRI 212
>AF454548-1|AAM93549.1| 436|Homo sapiens voltage-gated potassium
channel subunit Kv10.1b protein.
Length = 436
Score = 31.9 bits (69), Expect = 3.2
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 411 RFVVLRGKCAFVKHMLNIVSFLMQT*Y 331
RF+V + KC FVK LNI+ L T Y
Sbjct: 239 RFIVSKNKCEFVKRPLNIIDLLAITPY 265
>AF454547-1|AAM93548.1| 425|Homo sapiens voltage-gated potassium
channel subunit Kv10.1a protein.
Length = 425
Score = 31.9 bits (69), Expect = 3.2
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 411 RFVVLRGKCAFVKHMLNIVSFLMQT*Y 331
RF+V + KC FVK LNI+ L T Y
Sbjct: 228 RFIVSKNKCEFVKRPLNIIDLLAITPY 254
>AF450110-1|AAP46291.1| 433|Homo sapiens voltage-gated potassium
channel subunit Kv6.4 protein.
Length = 433
Score = 31.9 bits (69), Expect = 3.2
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 411 RFVVLRGKCAFVKHMLNIVSFLMQT*Y 331
RF+V + KC FVK LNI+ L T Y
Sbjct: 236 RFIVSKNKCEFVKRPLNIIDLLAITPY 262
>AF348982-1|AAL83909.1| 436|Homo sapiens voltage-gated potassium
channel Kv10.1 protein.
Length = 436
Score = 31.9 bits (69), Expect = 3.2
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 411 RFVVLRGKCAFVKHMLNIVSFLMQT*Y 331
RF+V + KC FVK LNI+ L T Y
Sbjct: 239 RFIVSKNKCEFVKRPLNIIDLLAITPY 265
>AC025750-1|AAY24039.1| 436|Homo sapiens unknown protein.
Length = 436
Score = 31.9 bits (69), Expect = 3.2
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 411 RFVVLRGKCAFVKHMLNIVSFLMQT*Y 331
RF+V + KC FVK LNI+ L T Y
Sbjct: 239 RFIVSKNKCEFVKRPLNIIDLLAITPY 265
>AB070604-1|BAB85520.1| 436|Homo sapiens voltage-gated K+ channel
6.3 protein.
Length = 436
Score = 31.9 bits (69), Expect = 3.2
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 411 RFVVLRGKCAFVKHMLNIVSFLMQT*Y 331
RF+V + KC FVK LNI+ L T Y
Sbjct: 239 RFIVSKNKCEFVKRPLNIIDLLAITPY 265
>U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-43
protein.
Length = 414
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 153 TRHLWVGNLPDNIREDRIREHFKRYGRVQNV 245
+R ++VG +++ ED +RE F +YG V +V
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDV 220
>EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1
protein.
Length = 414
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 153 TRHLWVGNLPDNIREDRIREHFKRYGRVQNV 245
+R ++VG +++ ED +RE F +YG V +V
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDV 220
>EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein.
Length = 416
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 153 TRHLWVGNLPDNIREDRIREHFKRYGRVQNV 245
+R ++VG +++ ED +RE F +YG V +V
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDV 220
>CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein.
Length = 414
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 153 TRHLWVGNLPDNIREDRIREHFKRYGRVQNV 245
+R ++VG +++ ED +RE F +YG V +V
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDV 220
>BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 153 TRHLWVGNLPDNIREDRIREHFKRYGRVQNV 245
+R ++VG +++ ED +RE F +YG V +V
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDV 220
>BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein.
Length = 414
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 153 TRHLWVGNLPDNIREDRIREHFKRYGRVQNV 245
+R ++VG +++ ED +RE F +YG V +V
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDV 220
>BC006474-1|AAH06474.1| 1027|Homo sapiens Unknown (protein for
IMAGE:2820942) protein.
Length = 1027
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +3
Query: 153 TRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTESVPTGASVSGNSGVCATVAFMD 332
T +L++GN+ + E+ + + F R+G + +VK++ P C VAFM+
Sbjct: 271 TTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMW-----PRTDEERARERNCGFVAFMN 325
Query: 333 IKSASKS 353
+ A ++
Sbjct: 326 RRDAERA 332
>AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein
protein.
Length = 295
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 153 TRHLWVGNLPDNIREDRIREHFKRYGRVQNV 245
+R ++VG +++ ED +RE F +YG V +V
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDV 220
>AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 153 TRHLWVGNLPDNIREDRIREHFKRYGRVQNV 245
+R ++VG +++ ED +RE F +YG V +V
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDV 220
>AB002330-1|BAA20790.1| 1028|Homo sapiens KIAA0332 protein.
Length = 1028
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +3
Query: 153 TRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLLGRTESVPTGASVSGNSGVCATVAFMD 332
T +L++GN+ + E+ + + F R+G + +VK++ P C VAFM+
Sbjct: 272 TTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMW-----PRTDEERARERNCGFVAFMN 326
Query: 333 IKSASKS 353
+ A ++
Sbjct: 327 RRDAERA 333
>CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein.
Length = 357
Score = 30.7 bits (66), Expect = 7.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNV 245
L+VGNLP +I E+ + F+RYG V
Sbjct: 48 LFVGNLPTDITEEDFKRLFERYGEPSEV 75
>BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein.
Length = 393
Score = 30.7 bits (66), Expect = 7.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNV 245
L+VGNLP +I E+ + F+RYG V
Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEV 111
>AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1
protein.
Length = 248
Score = 30.7 bits (66), Expect = 7.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNV 245
L+VGNLP +I E+ + F+RYG V
Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEV 111
>AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1
protein.
Length = 523
Score = 30.7 bits (66), Expect = 7.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNV 245
L+VGNLP +I E+ + F+RYG V
Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEV 111
>AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ10955 fis, clone PLACE1000406, moderately
similar to PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 357
Score = 30.7 bits (66), Expect = 7.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNV 245
L+VGNLP +I E+ + F+RYG V
Sbjct: 48 LFVGNLPTDITEEDFKRLFERYGEPSEV 75
>AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 beta
isoform protein.
Length = 393
Score = 30.7 bits (66), Expect = 7.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNV 245
L+VGNLP +I E+ + F+RYG V
Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEV 111
>AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1
alpha isoform protein.
Length = 523
Score = 30.7 bits (66), Expect = 7.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNV 245
L+VGNLP +I E+ + F+RYG V
Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEV 111
>U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein.
Length = 366
Score = 30.3 bits (65), Expect = 9.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRV 236
L++GNLP E IR F++YG+V
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKV 28
>BC064960-1|AAH64960.1| 143|Homo sapiens RBM4 protein protein.
Length = 143
Score = 30.3 bits (65), Expect = 9.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRV 236
L++GNLP E IR F++YG+V
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKV 28
>BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 30.3 bits (65), Expect = 9.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRV 236
L++GNLP E IR F++YG+V
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKV 28
>BC021120-1|AAH21120.1| 177|Homo sapiens RBM4 protein protein.
Length = 177
Score = 30.3 bits (65), Expect = 9.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRV 236
L++GNLP E IR F++YG+V
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKV 28
>BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 30.3 bits (65), Expect = 9.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRV 236
L++GNLP E IR F++YG+V
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKV 28
>BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 30.3 bits (65), Expect = 9.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRV 236
L++GNLP E IR F++YG+V
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKV 28
>BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 30.3 bits (65), Expect = 9.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRV 236
L++GNLP E IR F++YG+V
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKV 28
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,084,441
Number of Sequences: 237096
Number of extensions: 2286463
Number of successful extensions: 7684
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 7432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7681
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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