Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_L17
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 38 0.010
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 38 0.010
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 38 0.010
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 37 0.022
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 37 0.022
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 37 0.022
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 36 0.029
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 36 0.029
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 36 0.039
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 36 0.039
AF025464-3|AAB71016.3| 949|Caenorhabditis elegans Transporter o... 36 0.051
AC024823-1|AAL32257.1| 510|Caenorhabditis elegans Hypothetical ... 35 0.067
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 32 0.63
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 32 0.63
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 31 0.83
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 31 0.83
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 31 1.1
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 31 1.1
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.1
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z29121-6|CAH19096.1| 405|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z29121-5|CAD54174.2| 403|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z22180-12|CAH19086.1| 405|Caenorhabditis elegans Hypothetical p... 29 4.4
Z22180-11|CAD54147.2| 403|Caenorhabditis elegans Hypothetical p... 29 4.4
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 29 4.4
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.4
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z82053-10|CAB04838.2| 278|Caenorhabditis elegans Hypothetical p... 28 7.7
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +3
Query: 144 VRETRHLWVGNLPDNIREDRIREHFKRYGRVQN-VKLLGRTESV 272
V+E+RH+ + LP + +DR++ HF ++G +Q V+ G E V
Sbjct: 10 VKESRHVAISGLPSTLPDDRLQLHFTKFGEIQRLVRQHGNPEIV 53
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +3
Query: 144 VRETRHLWVGNLPDNIREDRIREHFKRYGRVQN-VKLLGRTESV 272
V+E+RH+ + LP + +DR++ HF ++G +Q V+ G E V
Sbjct: 10 VKESRHVAISGLPSTLPDDRLQLHFTKFGEIQRLVRQHGNPEIV 53
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +3
Query: 144 VRETRHLWVGNLPDNIREDRIREHFKRYGRVQN-VKLLGRTESV 272
V+E+RH+ + LP + +DR++ HF ++G +Q V+ G E V
Sbjct: 10 VKESRHVAISGLPSTLPDDRLQLHFTKFGEIQRLVRQHGNPEIV 53
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +3
Query: 144 VRETRHLWVGNLPDNIREDRIREHFKRYGRVQN-VKLLGRTESV 272
V+E+RH+ + LP + +DR++ HF ++G +Q V+ G E V
Sbjct: 10 VKESRHVAISGLPSTLPDDRLQLHFTKFGEIQRLVRQHGNPEIV 53
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +3
Query: 144 VRETRHLWVGNLPDNIREDRIREHFKRYGRVQN-VKLLGRTESV 272
V+E+RH+ + LP + +DR++ HF ++G +Q V+ G E V
Sbjct: 10 VKESRHVAISGLPSTLPDDRLQLHFTKFGEIQRLVRQHGNPEIV 53
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +3
Query: 144 VRETRHLWVGNLPDNIREDRIREHFKRYGRVQN-VKLLGRTESV 272
V+E+RH+ + LP + +DR++ HF ++G +Q V+ G E V
Sbjct: 10 VKESRHVAISGLPSTLPDDRLQLHFTKFGEIQRLVRQHGNPEIV 53
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 36.7 bits (81), Expect = 0.022
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +3
Query: 153 TRHLWVGNLPDNIREDRIREHFKRYGRVQNVKL 251
TR L+VGN+P +++E IR F+ +G+V+ V +
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 36.7 bits (81), Expect = 0.022
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +3
Query: 153 TRHLWVGNLPDNIREDRIREHFKRYGRVQNVKL 251
TR L+VGN+P +++E IR F+ +G+V+ V +
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 36.7 bits (81), Expect = 0.022
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +3
Query: 153 TRHLWVGNLPDNIREDRIREHFKRYGRVQNVKL 251
TR L+VGN+P +++E IR F+ +G+V+ V +
Sbjct: 145 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 177
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 36.3 bits (80), Expect = 0.029
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +3
Query: 150 ETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKL 251
E + ++VGNLP ++RE + + F +YGR++ V +
Sbjct: 7 EDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI 40
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 36.3 bits (80), Expect = 0.029
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +3
Query: 150 ETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKL 251
E + ++VGNLP ++RE + + F +YGR++ V +
Sbjct: 7 EDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI 40
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 35.9 bits (79), Expect = 0.039
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +3
Query: 147 RETRHLWVGNLPDNIREDRIREHFKRYGRVQNVK 248
RE + ++VG LP + E +R HF+++G+V +++
Sbjct: 107 RENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIE 140
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 35.9 bits (79), Expect = 0.039
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +3
Query: 147 RETRHLWVGNLPDNIREDRIREHFKRYGRVQNVK 248
RE + ++VG LP + E +R HF+++G+V +++
Sbjct: 107 RENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIE 140
>AF025464-3|AAB71016.3| 949|Caenorhabditis elegans Transporter of
sr proteins protein1 protein.
Length = 949
Score = 35.5 bits (78), Expect = 0.051
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = -1
Query: 340 DLISMNATVAQTPLFPLTLAPVGTLSVRPNNLTFWTRP*RLKCSLIRSSRMLSGKFPTHR 161
D I+ V TPL P L +G L N + CSL R+ M++ K P H
Sbjct: 507 DRITSKCAVQMTPLLPQLLTLIGVLEQTTTN---GAKVEEAICSLTRAISMIASKLPAHE 563
Query: 160 CRVSLTILLQ 131
++++ L +
Sbjct: 564 AKIAMEQLCE 573
>AC024823-1|AAL32257.1| 510|Caenorhabditis elegans Hypothetical
protein Y55B1BM.1b protein.
Length = 510
Score = 35.1 bits (77), Expect = 0.067
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Frame = +1
Query: 64 QFCAKLFFAT*RCGRVMIPNVELEARWLERLGICGLETYPITFV--KIE*GSTSNVMAES 237
Q +K+F R ++ E + RWL+ +CG +P+ ++ GS SN +
Sbjct: 349 QVDSKIFALKSRMEKIHTLTRETQERWLQIESLCG---FPLLYLNGSSSSGSISNAHSNP 405
Query: 238 RMSNCWVEQKAYPQAQASVET--VEFVPLLRSWISSLHQKAHN--IEHVLDERTLTTEYY 405
N +K P S +T + FVP +S S+H + + +E V R+LT +
Sbjct: 406 NAVNSNFVKKVSPPIPPSQQTANLRFVPTEQS--DSIHSEDTSPIVEDVAISRSLTQDLA 463
Query: 406 EPAAIPVVXGVRLXAGS 456
E +V G +GS
Sbjct: 464 EADMQSIVSGSTNGSGS 480
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 144 VRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLL 254
+ ET L++ NLP +ED ++ FK+YG V V+++
Sbjct: 275 ILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVV 311
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 153 TRHLWVGNLPDNIREDRIREHFKRYGRVQNVKL 251
T L V NLP E ++R+ F++YG++ + L
Sbjct: 2 TTRLIVKNLPSTCTEQQLRKFFEKYGQISDASL 34
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 31.9 bits (69), Expect = 0.63
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 153 TRHLWVGNLPDNIREDRIREHFKRYGRVQ 239
+R ++VG LP ++E I F RYGR+Q
Sbjct: 87 SRKVFVGGLPSCVKESDILNFFSRYGRLQ 115
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 31.5 bits (68), Expect = 0.83
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLL 254
++VG P + E +REHF+++ V++VK++
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMV 98
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 31.5 bits (68), Expect = 0.83
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLL 254
++VG P + E +REHF+++ V++VK++
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMV 99
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGR 260
L+VGNLP+ ++E ++E F +G + L G+
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLSGK 150
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGR 260
L+VGNLP+ ++E ++E F +G + L G+
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLSGK 150
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLLGR 260
L+VGNLP+ ++E ++E F +G + L G+
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLSGK 150
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 144 VRETRHLWVGNLPDNIREDRIREHFKRYGRVQNVKL-LGRTESVPTG 281
+R + L+VGNL +ED++ E F R G V+ V + L R + P G
Sbjct: 33 LRTSCTLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCG 79
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRV 236
L+VGNLPDN+ +++++ F+ + +V
Sbjct: 5 LFVGNLPDNVDSNKLKQVFQPFCKV 29
>Z29121-6|CAH19096.1| 405|Caenorhabditis elegans Hypothetical
protein ZK757.4b protein.
Length = 405
Score = 29.1 bits (62), Expect = 4.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 78 FCTKLCCTHVDNSHNCKL 25
FC K CC D SH+C +
Sbjct: 135 FCDKCCCIKPDRSHHCSM 152
>Z29121-5|CAD54174.2| 403|Caenorhabditis elegans Hypothetical
protein ZK757.4a protein.
Length = 403
Score = 29.1 bits (62), Expect = 4.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 78 FCTKLCCTHVDNSHNCKL 25
FC K CC D SH+C +
Sbjct: 133 FCDKCCCIKPDRSHHCSM 150
>Z22180-12|CAH19086.1| 405|Caenorhabditis elegans Hypothetical
protein ZK757.4b protein.
Length = 405
Score = 29.1 bits (62), Expect = 4.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 78 FCTKLCCTHVDNSHNCKL 25
FC K CC D SH+C +
Sbjct: 135 FCDKCCCIKPDRSHHCSM 152
>Z22180-11|CAD54147.2| 403|Caenorhabditis elegans Hypothetical
protein ZK757.4a protein.
Length = 403
Score = 29.1 bits (62), Expect = 4.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 78 FCTKLCCTHVDNSHNCKL 25
FC K CC D SH+C +
Sbjct: 133 FCDKCCCIKPDRSHHCSM 150
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRV 236
L+VGNLPDN+ +++++ F+ + +V
Sbjct: 5 LFVGNLPDNVDSNKLKQVFQPFCKV 29
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 153 TRHLWVGNLPDNIREDRIREHFKRYGRVQNVKLLG 257
+R LW+ +P NI E+ +++ + G VK++G
Sbjct: 524 SRTLWLKKIPTNIVENDLKQAVESCGEASRVKVIG 558
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 162 LWVGNLPDNIREDRIREHFKRYGRVQNVKLL 254
++VGN P ED + +F + G V NV+++
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIV 36
>Z82053-10|CAB04838.2| 278|Caenorhabditis elegans Hypothetical
protein T26E3.8 protein.
Length = 278
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 250 CWVEQKAYPQAQASVETVEFVPLLRSWISSLHQKAHN 360
C + + +Y + S ET + L SW SSLH N
Sbjct: 132 CTISRMSYTNQRISGETFQLFARLGSWRSSLHVNVTN 168
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,131,116
Number of Sequences: 27780
Number of extensions: 338708
Number of successful extensions: 966
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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