Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_L12
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0213 + 20974712-20975413                                         31   1.2  
12_01_0160 - 1212295-1213586,1213828-1213976,1214288-1214445,121...    31   1.6  
11_04_0071 - 13165019-13165082,13165345-13165428,13166325-131665...    30   2.1  
10_01_0065 + 845447-846187,846969-847193                               29   6.5  

>02_04_0213 + 20974712-20975413
          Length = 233

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +1

Query: 325 ITKENEEKSIQTHLELSRQEKAAWEETKMYGWQDFQDFTLRRMFKKYSQLGVAALP 492
           + +E EE+ +    E  R  +A  EE     W+DF D  L ++ ++  Q   A  P
Sbjct: 73  VDEEEEEERMDQLWERDRDARAGDEERMDLLWEDFNDELLLQLRRRQQQRAAAGTP 128


>12_01_0160 -
           1212295-1213586,1213828-1213976,1214288-1214445,
           1214860-1215004,1215102-1215226
          Length = 622

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +1

Query: 454 FKKYSQLGVAALPDDKFQALMRTVSGMESNYATAKICSYKNESKCDLSLEPEI 612
           F+K    G A LPDD+ + L +  +G++ N  T ++   K+ S C    + +I
Sbjct: 428 FQKPFVGGFAILPDDEDEQLEKNDNGVKINSGTVQLTDDKDTSLCSRQTDSKI 480


>11_04_0071 - 13165019-13165082,13165345-13165428,13166325-13166524,
            13166756-13170655
          Length = 1415

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 670  HSTQACFNSSGLGSWRIFQLSQAPKIDRIYFHSCTS 563
            H+    F  S L S  IF +S +P++  +  HSCTS
Sbjct: 1183 HNELLPFLLSNLTSLSIFAISNSPELTSLVLHSCTS 1218


>10_01_0065 + 845447-846187,846969-847193
          Length = 321

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 501 IPSFDENCVWNGIELCH 551
           +PSFD   VW G+E CH
Sbjct: 138 LPSFDMEGVWRGMEECH 154


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,188,182
Number of Sequences: 37544
Number of extensions: 386356
Number of successful extensions: 1098
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)